EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000018742 (Gene tree)
Gene ID: 101575774
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein L
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 618 bases
Position: chrJH651669.1:2914551-2915168
Accession: 101575774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025484	RRM_5	PF13893.6	8.1e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000025807	-	618	XM_004642491	ENSODEP00000025484	205 (aa)	XP_004642548	UPI000333851C

Gene Model

Click here to download ENSODEG00000018742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000018742	-	99	61.765	ENSG00000143889	HNRNPLL	97	54.264	Homo_sapiens
ENSODEG00000018742	-	88	75.000	ENSACIG00000000531	-	96	75.000	Amphilophus_citrinellus
ENSODEG00000018742	-	93	30.052	ENSACLG00000001885	ptbp2b	99	30.052	Astatotilapia_calliptera
ENSODEG00000018742	-	90	44.149	ENSBTAG00000052096	-	90	44.149	Bos_taurus
ENSODEG00000018742	-	63	32.308	ENSCJAG00000020162	-	61	32.308	Callithrix_jacchus
ENSODEG00000018742	-	100	98.537	ENSTSYG00000001402	HNRNPL	100	98.537	Carlito_syrichta
ENSODEG00000018742	-	99	61.765	ENSCAPG00000013604	HNRNPLL	67	61.765	Cavia_aperea
ENSODEG00000018742	-	58	34.167	ENSCCAG00000025811	-	59	34.167	Cebus_capucinus
ENSODEG00000018742	-	55	32.743	ENSCVAG00000021593	-	69	32.407	Cyprinodon_variegatus
ENSODEG00000018742	-	97	30.000	ENSDARG00000101947	ptbp2a	96	30.481	Danio_rerio
ENSODEG00000018742	-	84	31.667	ENSDARG00000031907	ptbp1b	56	30.303	Danio_rerio
ENSODEG00000018742	-	99	82.843	ENSDNOG00000046207	-	56	82.843	Dasypus_novemcinctus
ENSODEG00000018742	-	99	44.928	FBgn0003435	sm	78	44.928	Drosophila_melanogaster
ENSODEG00000018742	-	99	64.039	ENSEBUG00000012362	-	98	64.039	Eptatretus_burgeri
ENSODEG00000018742	-	90	63.784	ENSEBUG00000008335	-	92	63.784	Eptatretus_burgeri
ENSODEG00000018742	-	100	98.049	ENSECAG00000012677	HNRNPL	88	97.753	Equus_caballus
ENSODEG00000018742	-	84	76.744	ENSFHEG00000004874	-	98	76.744	Fundulus_heteroclitus
ENSODEG00000018742	-	100	73.171	ENSGMOG00000008678	-	84	73.171	Gadus_morhua
ENSODEG00000018742	-	99	75.000	ENSGACG00000020165	-	85	75.000	Gasterosteus_aculeatus
ENSODEG00000018742	-	85	94.286	ENSGAGG00000008379	-	100	94.286	Gopherus_agassizii
ENSODEG00000018742	-	55	31.034	ENSGGOG00000005090	-	59	31.034	Gorilla_gorilla
ENSODEG00000018742	-	91	31.383	ENSHCOG00000015622	-	75	32.353	Hippocampus_comes
ENSODEG00000018742	-	100	71.707	ENSIPUG00000019108	hnrnpl	97	71.751	Ictalurus_punctatus
ENSODEG00000018742	-	65	32.090	ENSMICG00000007131	PTBP1	59	33.333	Microcebus_murinus
ENSODEG00000018742	-	86	30.508	ENSMALG00000013144	ptbp3	87	30.588	Monopterus_albus
ENSODEG00000018742	-	82	31.176	ENSNBRG00000001492	-	73	31.176	Neolamprologus_brichardi
ENSODEG00000018742	-	88	70.166	ENSNBRG00000001563	-	94	70.166	Neolamprologus_brichardi
ENSODEG00000018742	-	99	61.765	ENSOANG00000013257	-	86	61.765	Ornithorhynchus_anatinus
ENSODEG00000018742	-	77	30.380	ENSOMEG00000009759	ptbp2a	91	30.380	Oryzias_melastigma
ENSODEG00000018742	-	55	34.211	ENSPPAG00000032109	-	59	34.211	Pan_paniscus
ENSODEG00000018742	-	60	33.333	ENSPPRG00000006787	PTBP1	59	33.333	Panthera_pardus
ENSODEG00000018742	-	55	35.088	ENSPTRG00000010165	PTBP1	59	34.211	Pan_troglodytes
ENSODEG00000018742	-	65	32.090	ENSPCOG00000015093	PTBP1	59	33.333	Propithecus_coquereli
ENSODEG00000018742	-	54	33.036	ENSPNYG00000005126	-	61	33.036	Pundamilia_nyererei
ENSODEG00000018742	-	100	99.024	ENSRNOG00000020235	Hnrnpl	84	99.024	Rattus_norvegicus
ENSODEG00000018742	-	61	32.540	ENSSBOG00000034376	-	63	32.540	Saimiri_boliviensis_boliviensis
ENSODEG00000018742	-	87	98.324	ENSSSCG00000036998	-	95	98.324	Sus_scrofa
ENSODEG00000018742	-	69	30.070	ENSTRUG00000000761	ptbp2a	90	30.070	Takifugu_rubripes
ENSODEG00000018742	-	87	98.315	ENSUMAG00000019193	-	80	98.315	Ursus_maritimus
ENSODEG00000018742	-	98	58.416	ENSXETG00000033350	HNRNPLL	81	58.416	Xenopus_tropicalis
ENSODEG00000018742	-	91	30.688	ENSXCOG00000007998	ptbp2b	82	31.579	Xiphophorus_couchianus