EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000018769 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 312 bases
Position: chrJH651614.1:5037796-5038107
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025507	LSM	PF01423.22	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000025834	-	312	-	ENSODEP00000025507	103 (aa)	-	-

Gene Model

Click here to download ENSODEG00000018769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000018769	-	100	93.204	ENSODEG00000013590	-	100	93.204
ENSODEG00000018769	-	100	72.816	ENSODEG00000008190	-	100	72.816
ENSODEG00000018769	-	69	30.986	ENSODEG00000011198	-	83	30.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000018769	-	100	93.204	ENSG00000130332	LSM7	100	95.918	Homo_sapiens
ENSODEG00000018769	-	83	87.209	ENSAPOG00000015573	lsm7	81	88.298	Acanthochromis_polyacanthus
ENSODEG00000018769	-	100	90.291	ENSAMEG00000005484	LSM7	100	90.291	Ailuropoda_melanoleuca
ENSODEG00000018769	-	95	87.755	ENSACIG00000006498	lsm7	78	87.755	Amphilophus_citrinellus
ENSODEG00000018769	-	98	88.119	ENSAOCG00000001077	lsm7	92	88.119	Amphiprion_ocellaris
ENSODEG00000018769	-	100	88.350	ENSAPEG00000000694	lsm7	100	88.350	Amphiprion_percula
ENSODEG00000018769	-	100	86.408	ENSAPEG00000024447	lsm7	92	88.119	Amphiprion_percula
ENSODEG00000018769	-	100	88.350	ENSATEG00000008557	lsm7	100	88.350	Anabas_testudineus
ENSODEG00000018769	-	100	85.437	ENSANAG00000022222	-	100	85.437	Aotus_nancymaae
ENSODEG00000018769	-	100	93.204	ENSANAG00000037196	-	100	93.204	Aotus_nancymaae
ENSODEG00000018769	-	100	87.379	ENSACLG00000021021	lsm7	100	87.379	Astatotilapia_calliptera
ENSODEG00000018769	-	100	88.350	ENSAMXG00000037622	lsm7	100	88.350	Astyanax_mexicanus
ENSODEG00000018769	-	100	93.204	ENSBTAG00000004521	LSM7	100	93.204	Bos_taurus
ENSODEG00000018769	-	97	52.000	WBGene00003081	lsm-7	96	52.000	Caenorhabditis_elegans
ENSODEG00000018769	-	54	91.071	ENSCJAG00000039713	-	68	91.071	Callithrix_jacchus
ENSODEG00000018769	-	98	92.079	ENSCAFG00000019409	LSM7	98	92.079	Canis_familiaris
ENSODEG00000018769	-	98	92.079	ENSCAFG00020018168	LSM7	74	92.079	Canis_lupus_dingo
ENSODEG00000018769	-	100	91.262	ENSCHIG00000023663	LSM7	100	91.262	Capra_hircus
ENSODEG00000018769	-	69	92.958	ENSCAPG00000014534	LSM7	100	92.958	Cavia_aperea
ENSODEG00000018769	-	100	93.204	ENSCPOG00000014025	LSM7	100	93.204	Cavia_porcellus
ENSODEG00000018769	-	98	93.069	ENSCCAG00000035456	LSM7	99	93.069	Cebus_capucinus
ENSODEG00000018769	-	100	93.204	ENSCATG00000023543	LSM7	100	93.204	Cercocebus_atys
ENSODEG00000018769	-	100	93.204	ENSCLAG00000011635	LSM7	100	93.204	Chinchilla_lanigera
ENSODEG00000018769	-	100	93.204	ENSCSAG00000011599	LSM7	100	93.204	Chlorocebus_sabaeus
ENSODEG00000018769	-	70	87.500	ENSCPBG00000021317	LSM7	77	87.500	Chrysemys_picta_bellii
ENSODEG00000018769	-	93	72.917	ENSCING00000022134	-	97	72.917	Ciona_intestinalis
ENSODEG00000018769	-	100	93.204	ENSCANG00000035525	LSM7	100	93.204	Colobus_angolensis_palliatus
ENSODEG00000018769	-	100	92.233	ENSCGRG00001000807	-	100	92.233	Cricetulus_griseus_chok1gshd
ENSODEG00000018769	-	87	82.222	ENSCGRG00001016005	-	92	82.222	Cricetulus_griseus_chok1gshd
ENSODEG00000018769	-	87	82.222	ENSCGRG00000006821	-	92	82.222	Cricetulus_griseus_crigri
ENSODEG00000018769	-	98	92.079	ENSCGRG00000014355	-	97	92.079	Cricetulus_griseus_crigri
ENSODEG00000018769	-	98	88.119	ENSCSEG00000014900	lsm7	86	88.119	Cynoglossus_semilaevis
ENSODEG00000018769	-	98	89.109	ENSCVAG00000021091	lsm7	94	89.109	Cyprinodon_variegatus
ENSODEG00000018769	-	100	88.350	ENSDARG00000058328	lsm7	100	88.350	Danio_rerio
ENSODEG00000018769	-	99	91.176	ENSDORG00000024460	Lsm7	100	91.176	Dipodomys_ordii
ENSODEG00000018769	-	94	69.388	FBgn0261068	LSm7	89	69.388	Drosophila_melanogaster
ENSODEG00000018769	-	98	91.089	ENSETEG00000012788	LSM7	99	91.089	Echinops_telfairi
ENSODEG00000018769	-	79	54.321	ENSEBUG00000010470	-	77	54.321	Eptatretus_burgeri
ENSODEG00000018769	-	100	77.670	ENSEBUG00000016992	lsm7	99	77.670	Eptatretus_burgeri
ENSODEG00000018769	-	100	89.320	ENSECAG00000001440	LSM7	66	89.320	Equus_caballus
ENSODEG00000018769	-	100	92.233	ENSFCAG00000003445	LSM7	100	92.233	Felis_catus
ENSODEG00000018769	-	98	90.099	ENSFALG00000011912	LSM7	100	90.099	Ficedula_albicollis
ENSODEG00000018769	-	93	92.708	ENSFDAG00000007661	LSM7	100	92.708	Fukomys_damarensis
ENSODEG00000018769	-	89	88.043	ENSFHEG00000006349	lsm7	90	89.109	Fundulus_heteroclitus
ENSODEG00000018769	-	100	84.466	ENSGMOG00000013320	lsm7	100	84.466	Gadus_morhua
ENSODEG00000018769	-	100	89.320	ENSGAFG00000013902	lsm7	100	89.320	Gambusia_affinis
ENSODEG00000018769	-	100	85.437	ENSGACG00000010390	lsm7	100	85.437	Gasterosteus_aculeatus
ENSODEG00000018769	-	100	93.204	ENSGGOG00000010172	LSM7	100	93.204	Gorilla_gorilla
ENSODEG00000018769	-	100	87.379	ENSHBUG00000004616	lsm7	100	87.379	Haplochromis_burtoni
ENSODEG00000018769	-	100	93.204	ENSHGLG00000010587	LSM7	100	93.204	Heterocephalus_glaber_female
ENSODEG00000018769	-	100	93.204	ENSHGLG00100000852	LSM7	100	93.204	Heterocephalus_glaber_male
ENSODEG00000018769	-	98	87.129	ENSHCOG00000020252	lsm7	100	87.129	Hippocampus_comes
ENSODEG00000018769	-	100	88.350	ENSIPUG00000024724	lsm7	100	88.350	Ictalurus_punctatus
ENSODEG00000018769	-	98	93.069	ENSSTOG00000028372	LSM7	99	93.069	Ictidomys_tridecemlineatus
ENSODEG00000018769	-	98	91.089	ENSJJAG00000001936	Lsm7	98	91.089	Jaculus_jaculus
ENSODEG00000018769	-	100	89.320	ENSKMAG00000022151	lsm7	100	89.320	Kryptolebias_marmoratus
ENSODEG00000018769	-	100	87.379	ENSLBEG00000005203	lsm7	100	87.379	Labrus_bergylta
ENSODEG00000018769	-	90	91.398	ENSLACG00000015700	LSM7	100	90.291	Latimeria_chalumnae
ENSODEG00000018769	-	98	91.089	ENSLOCG00000004356	lsm7	98	91.089	Lepisosteus_oculatus
ENSODEG00000018769	-	98	93.069	ENSLAFG00000029302	LSM7	98	93.069	Loxodonta_africana
ENSODEG00000018769	-	100	93.204	ENSMFAG00000044572	LSM7	100	93.204	Macaca_fascicularis
ENSODEG00000018769	-	100	93.204	ENSMMUG00000000452	LSM7	100	93.204	Macaca_mulatta
ENSODEG00000018769	-	100	93.204	ENSMNEG00000004393	LSM7	100	93.204	Macaca_nemestrina
ENSODEG00000018769	-	100	93.204	ENSMLEG00000030852	LSM7	100	93.204	Mandrillus_leucophaeus
ENSODEG00000018769	-	100	87.379	ENSMAMG00000005410	lsm7	100	87.379	Mastacembelus_armatus
ENSODEG00000018769	-	100	87.379	ENSMZEG00005028055	lsm7	100	87.379	Maylandia_zebra
ENSODEG00000018769	-	100	91.262	ENSMGAG00000000750	LSM7	89	91.262	Meleagris_gallopavo
ENSODEG00000018769	-	100	92.233	ENSMAUG00000009276	Lsm7	100	92.233	Mesocricetus_auratus
ENSODEG00000018769	-	100	93.204	ENSMICG00000028619	-	100	93.204	Microcebus_murinus
ENSODEG00000018769	-	100	92.233	ENSMICG00000009988	-	100	92.233	Microcebus_murinus
ENSODEG00000018769	-	100	92.233	ENSMOCG00000016925	Lsm7	100	92.233	Microtus_ochrogaster
ENSODEG00000018769	-	100	88.350	ENSMMOG00000019645	lsm7	98	88.350	Mola_mola
ENSODEG00000018769	-	100	92.233	ENSMODG00000004722	LSM7	100	92.233	Monodelphis_domestica
ENSODEG00000018769	-	100	87.379	ENSMALG00000014511	lsm7	79	87.379	Monopterus_albus
ENSODEG00000018769	-	100	90.291	MGP_CAROLIEiJ_G0015607	Lsm7	100	90.291	Mus_caroli
ENSODEG00000018769	-	100	90.291	ENSMUSG00000035215	Lsm7	100	90.291	Mus_musculus
ENSODEG00000018769	-	100	90.291	MGP_PahariEiJ_G0031020	Lsm7	100	90.291	Mus_pahari
ENSODEG00000018769	-	100	90.291	MGP_SPRETEiJ_G0016425	Lsm7	100	90.291	Mus_spretus
ENSODEG00000018769	-	100	87.379	ENSMLUG00000024002	-	94	87.379	Myotis_lucifugus
ENSODEG00000018769	-	100	90.291	ENSMLUG00000013097	-	100	90.291	Myotis_lucifugus
ENSODEG00000018769	-	100	91.262	ENSNGAG00000021637	Lsm7	100	91.262	Nannospalax_galili
ENSODEG00000018769	-	98	87.129	ENSNBRG00000015770	lsm7	87	87.129	Neolamprologus_brichardi
ENSODEG00000018769	-	91	87.234	ENSNBRG00000001237	-	82	85.437	Neolamprologus_brichardi
ENSODEG00000018769	-	100	93.204	ENSNLEG00000002265	LSM7	100	93.204	Nomascus_leucogenys
ENSODEG00000018769	-	100	87.379	ENSONIG00000001801	lsm7	89	87.379	Oreochromis_niloticus
ENSODEG00000018769	-	100	88.350	ENSORLG00000023951	lsm7	100	88.350	Oryzias_latipes
ENSODEG00000018769	-	100	88.350	ENSORLG00020022226	lsm7	100	88.350	Oryzias_latipes_hni
ENSODEG00000018769	-	100	86.408	ENSORLG00015020044	lsm7	94	88.119	Oryzias_latipes_hsok
ENSODEG00000018769	-	100	88.350	ENSOMEG00000012806	lsm7	100	88.350	Oryzias_melastigma
ENSODEG00000018769	-	98	91.089	ENSOGAG00000000144	-	99	91.089	Otolemur_garnettii
ENSODEG00000018769	-	100	83.495	ENSOGAG00000024373	-	100	83.495	Otolemur_garnettii
ENSODEG00000018769	-	100	91.262	ENSOARG00000014013	LSM7	100	91.262	Ovis_aries
ENSODEG00000018769	-	100	93.204	ENSPPAG00000026500	LSM7	100	93.204	Pan_paniscus
ENSODEG00000018769	-	100	92.233	ENSPPRG00000008624	LSM7	100	92.233	Panthera_pardus
ENSODEG00000018769	-	98	92.079	ENSPTIG00000016252	LSM7	98	92.079	Panthera_tigris_altaica
ENSODEG00000018769	-	100	93.204	ENSPTRG00000010233	LSM7	100	93.204	Pan_troglodytes
ENSODEG00000018769	-	100	93.204	ENSPANG00000020668	LSM7	100	93.204	Papio_anubis
ENSODEG00000018769	-	100	90.291	ENSPKIG00000011325	lsm7	100	90.291	Paramormyrops_kingsleyae
ENSODEG00000018769	-	90	90.323	ENSPSIG00000017149	LSM7	89	91.089	Pelodiscus_sinensis
ENSODEG00000018769	-	100	88.350	ENSPMGG00000006498	lsm7	100	88.350	Periophthalmus_magnuspinnatus
ENSODEG00000018769	-	100	92.233	ENSPCIG00000030454	LSM7	100	92.233	Phascolarctos_cinereus
ENSODEG00000018769	-	100	86.408	ENSPFOG00000012467	lsm7	91	86.408	Poecilia_formosa
ENSODEG00000018769	-	100	86.408	ENSPLAG00000000252	lsm7	94	87.255	Poecilia_latipinna
ENSODEG00000018769	-	100	86.408	ENSPMEG00000000587	lsm7	94	87.255	Poecilia_mexicana
ENSODEG00000018769	-	80	68.675	ENSPREG00000016718	lsm7	66	68.675	Poecilia_reticulata
ENSODEG00000018769	-	71	90.411	ENSPPYG00000009348	-	50	90.411	Pongo_abelii
ENSODEG00000018769	-	100	93.204	ENSPCOG00000017177	LSM7	100	93.204	Propithecus_coquereli
ENSODEG00000018769	-	100	87.379	ENSPNYG00000006938	lsm7	100	87.379	Pundamilia_nyererei
ENSODEG00000018769	-	100	88.350	ENSPNAG00000010141	lsm7	100	88.350	Pygocentrus_nattereri
ENSODEG00000018769	-	100	91.262	ENSRNOG00000019552	Lsm7	100	91.262	Rattus_norvegicus
ENSODEG00000018769	-	100	93.204	ENSRBIG00000035978	LSM7	100	93.204	Rhinopithecus_bieti
ENSODEG00000018769	-	100	93.204	ENSRROG00000034044	LSM7	100	93.204	Rhinopithecus_roxellana
ENSODEG00000018769	-	86	41.304	YNL147W	-	80	41.304	Saccharomyces_cerevisiae
ENSODEG00000018769	-	100	93.204	ENSSBOG00000034899	LSM7	100	93.204	Saimiri_boliviensis_boliviensis
ENSODEG00000018769	-	100	88.350	ENSSFOG00015006728	lsm7	100	88.350	Scleropages_formosus
ENSODEG00000018769	-	100	86.408	ENSSMAG00000004195	lsm7	93	88.119	Scophthalmus_maximus
ENSODEG00000018769	-	100	88.350	ENSSDUG00000001863	lsm7	100	88.350	Seriola_dumerili
ENSODEG00000018769	-	100	88.350	ENSSLDG00000016339	lsm7	100	88.350	Seriola_lalandi_dorsalis
ENSODEG00000018769	-	100	88.350	ENSSPAG00000015221	lsm7	100	88.350	Stegastes_partitus
ENSODEG00000018769	-	98	93.069	ENSSSCG00000013463	LSM7	99	93.069	Sus_scrofa
ENSODEG00000018769	-	98	90.099	ENSTGUG00000000067	LSM7	100	90.099	Taeniopygia_guttata
ENSODEG00000018769	-	100	88.350	ENSTRUG00000022913	lsm7	100	88.350	Takifugu_rubripes
ENSODEG00000018769	-	100	88.350	ENSTNIG00000015525	lsm7	100	88.350	Tetraodon_nigroviridis
ENSODEG00000018769	-	68	80.000	ENSTBEG00000016602	LSM7	100	80.000	Tupaia_belangeri
ENSODEG00000018769	-	100	90.291	ENSUAMG00000000912	LSM7	86	90.291	Ursus_americanus
ENSODEG00000018769	-	98	92.079	ENSUMAG00000006556	LSM7	79	92.079	Ursus_maritimus
ENSODEG00000018769	-	69	91.549	ENSVVUG00000002640	LSM7	65	91.549	Vulpes_vulpes
ENSODEG00000018769	-	98	88.119	ENSXETG00000022166	lsm7	100	88.119	Xenopus_tropicalis
ENSODEG00000018769	-	99	88.235	ENSXCOG00000002572	lsm7	100	88.235	Xiphophorus_couchianus
ENSODEG00000018769	-	100	89.320	ENSXMAG00000018630	lsm7	100	89.320	Xiphophorus_maculatus