EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000018885 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 420 bases
Position: chrJH651726.1:2621180-2621599
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025607	Sas10_Utp3	PF04000.15	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000025950	-	420	-	ENSODEP00000025607	139 (aa)	-	-

Gene Model

Click here to download ENSODEG00000018885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000018885	-	99	85.507	ENSODEG00000018525	-	98	85.507
ENSODEG00000018885	-	100	99.281	ENSODEG00000011242	-	99	99.281

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000018885	-	99	95.652	ENSG00000197223	C1D	98	95.652	Homo_sapiens
ENSODEG00000018885	-	96	64.179	ENSAPOG00000005466	c1d	90	64.179	Acanthochromis_polyacanthus
ENSODEG00000018885	-	99	97.101	ENSAMEG00000004859	C1D	95	97.101	Ailuropoda_melanoleuca
ENSODEG00000018885	-	95	65.152	ENSACIG00000012684	c1d	86	65.152	Amphilophus_citrinellus
ENSODEG00000018885	-	93	64.341	ENSAOCG00000020354	c1d	87	64.062	Amphiprion_ocellaris
ENSODEG00000018885	-	94	64.615	ENSAPEG00000001403	c1d	84	64.615	Amphiprion_percula
ENSODEG00000018885	-	99	62.319	ENSATEG00000012922	c1d	89	62.319	Anabas_testudineus
ENSODEG00000018885	-	98	76.259	ENSAPLG00000009320	C1D	96	76.259	Anas_platyrhynchos
ENSODEG00000018885	-	87	81.818	ENSACAG00000001337	C1D	99	81.818	Anolis_carolinensis
ENSODEG00000018885	-	99	95.652	ENSANAG00000035972	-	98	95.652	Aotus_nancymaae
ENSODEG00000018885	-	99	92.029	ENSANAG00000005773	-	98	92.029	Aotus_nancymaae
ENSODEG00000018885	-	88	66.393	ENSACLG00000026206	c1d	87	64.122	Astatotilapia_calliptera
ENSODEG00000018885	-	100	63.380	ENSAMXG00000043212	c1d	97	63.380	Astyanax_mexicanus
ENSODEG00000018885	-	99	96.377	ENSBTAG00000049002	C1D	98	96.377	Bos_taurus
ENSODEG00000018885	-	99	96.377	ENSCJAG00000006589	C1D	91	96.377	Callithrix_jacchus
ENSODEG00000018885	-	84	88.034	ENSCJAG00000044668	-	91	88.034	Callithrix_jacchus
ENSODEG00000018885	-	99	94.928	ENSCAFG00000030099	C1D	98	94.928	Canis_familiaris
ENSODEG00000018885	-	99	94.928	ENSCAFG00020026997	C1D	98	94.928	Canis_lupus_dingo
ENSODEG00000018885	-	99	96.377	ENSCHIG00000025729	C1D	98	96.377	Capra_hircus
ENSODEG00000018885	-	99	85.507	ENSTSYG00000026573	-	83	85.507	Carlito_syrichta
ENSODEG00000018885	-	99	96.377	ENSTSYG00000035739	-	98	96.377	Carlito_syrichta
ENSODEG00000018885	-	86	81.667	ENSCAPG00000011523	-	100	81.667	Cavia_aperea
ENSODEG00000018885	-	99	94.203	ENSCPOG00000037986	-	98	94.203	Cavia_porcellus
ENSODEG00000018885	-	86	82.500	ENSCPOG00000020112	-	100	82.500	Cavia_porcellus
ENSODEG00000018885	-	99	96.377	ENSCCAG00000030405	-	98	96.377	Cebus_capucinus
ENSODEG00000018885	-	99	95.652	ENSCATG00000045336	C1D	98	95.652	Cercocebus_atys
ENSODEG00000018885	-	99	92.754	ENSCATG00000043348	-	98	92.754	Cercocebus_atys
ENSODEG00000018885	-	99	96.377	ENSCLAG00000011883	C1D	98	96.377	Chinchilla_lanigera
ENSODEG00000018885	-	99	94.928	ENSCSAG00000014811	C1D	98	94.928	Chlorocebus_sabaeus
ENSODEG00000018885	-	99	96.377	ENSCHOG00000006719	C1D	77	96.377	Choloepus_hoffmanni
ENSODEG00000018885	-	91	82.540	ENSCPBG00000014451	C1D	85	82.540	Chrysemys_picta_bellii
ENSODEG00000018885	-	87	42.149	ENSCING00000020906	-	64	41.803	Ciona_intestinalis
ENSODEG00000018885	-	84	47.009	ENSCSAVG00000000150	-	67	47.009	Ciona_savignyi
ENSODEG00000018885	-	99	94.928	ENSCANG00000035564	C1D	98	94.928	Colobus_angolensis_palliatus
ENSODEG00000018885	-	88	83.740	ENSCANG00000036599	-	100	83.740	Colobus_angolensis_palliatus
ENSODEG00000018885	-	99	89.130	ENSCGRG00001023376	C1d	98	89.130	Cricetulus_griseus_chok1gshd
ENSODEG00000018885	-	99	89.130	ENSCGRG00000010245	C1d	98	89.130	Cricetulus_griseus_crigri
ENSODEG00000018885	-	94	61.538	ENSCSEG00000000587	c1d	91	61.538	Cynoglossus_semilaevis
ENSODEG00000018885	-	98	61.029	ENSCVAG00000004603	c1d	87	62.595	Cyprinodon_variegatus
ENSODEG00000018885	-	88	65.041	ENSDARG00000021112	c1d	86	63.281	Danio_rerio
ENSODEG00000018885	-	99	88.406	ENSDNOG00000046068	-	98	88.406	Dasypus_novemcinctus
ENSODEG00000018885	-	99	92.754	ENSDORG00000003300	C1d	98	92.754	Dipodomys_ordii
ENSODEG00000018885	-	66	91.304	ENSETEG00000014857	C1D	97	91.304	Echinops_telfairi
ENSODEG00000018885	-	88	56.557	ENSEBUG00000006874	c1d	77	56.557	Eptatretus_burgeri
ENSODEG00000018885	-	99	96.377	ENSEASG00005007307	C1D	90	96.377	Equus_asinus_asinus
ENSODEG00000018885	-	100	95.683	ENSECAG00000002187	C1D	99	95.683	Equus_caballus
ENSODEG00000018885	-	91	67.460	ENSELUG00000014823	c1d	86	67.460	Esox_lucius
ENSODEG00000018885	-	99	97.101	ENSFCAG00000028933	C1D	98	97.101	Felis_catus
ENSODEG00000018885	-	95	80.597	ENSFALG00000013640	C1D	81	80.597	Ficedula_albicollis
ENSODEG00000018885	-	99	97.101	ENSFDAG00000010462	-	98	97.101	Fukomys_damarensis
ENSODEG00000018885	-	99	75.540	ENSFDAG00000014175	-	98	75.540	Fukomys_damarensis
ENSODEG00000018885	-	100	64.539	ENSFHEG00000010545	c1d	98	64.539	Fundulus_heteroclitus
ENSODEG00000018885	-	84	64.957	ENSGMOG00000013911	-	93	64.957	Gadus_morhua
ENSODEG00000018885	-	91	81.250	ENSGALG00000008765	C1D	89	81.250	Gallus_gallus
ENSODEG00000018885	-	94	64.615	ENSGAFG00000012578	c1d	83	64.615	Gambusia_affinis
ENSODEG00000018885	-	90	63.200	ENSGACG00000011981	c1d	98	63.200	Gasterosteus_aculeatus
ENSODEG00000018885	-	87	82.645	ENSGAGG00000013383	C1D	85	80.159	Gopherus_agassizii
ENSODEG00000018885	-	99	96.377	ENSGGOG00000025982	-	77	96.377	Gorilla_gorilla
ENSODEG00000018885	-	99	94.203	ENSGGOG00000022296	-	98	94.203	Gorilla_gorilla
ENSODEG00000018885	-	99	87.681	ENSGGOG00000025808	-	79	87.681	Gorilla_gorilla
ENSODEG00000018885	-	83	67.241	ENSHBUG00000018531	c1d	75	64.800	Haplochromis_burtoni
ENSODEG00000018885	-	94	96.923	ENSHGLG00000012332	-	99	95.683	Heterocephalus_glaber_female
ENSODEG00000018885	-	99	86.232	ENSHGLG00000021219	-	98	86.232	Heterocephalus_glaber_female
ENSODEG00000018885	-	99	86.957	ENSHGLG00100019951	-	98	86.957	Heterocephalus_glaber_male
ENSODEG00000018885	-	99	93.478	ENSHGLG00100000221	-	98	93.478	Heterocephalus_glaber_male
ENSODEG00000018885	-	93	62.595	ENSHCOG00000014568	C1D	89	62.595	Hippocampus_comes
ENSODEG00000018885	-	93	62.595	ENSHCOG00000014589	c1d	89	62.595	Hippocampus_comes
ENSODEG00000018885	-	94	60.902	ENSIPUG00000018661	c1d	92	60.902	Ictalurus_punctatus
ENSODEG00000018885	-	99	95.652	ENSSTOG00000012346	C1D	98	95.652	Ictidomys_tridecemlineatus
ENSODEG00000018885	-	99	72.464	ENSJJAG00000016086	-	100	72.464	Jaculus_jaculus
ENSODEG00000018885	-	99	80.435	ENSJJAG00000005044	-	100	80.435	Jaculus_jaculus
ENSODEG00000018885	-	91	80.769	ENSJJAG00000023186	-	99	80.769	Jaculus_jaculus
ENSODEG00000018885	-	99	80.435	ENSJJAG00000009540	-	100	80.435	Jaculus_jaculus
ENSODEG00000018885	-	98	64.706	ENSKMAG00000015077	c1d	88	64.706	Kryptolebias_marmoratus
ENSODEG00000018885	-	91	65.873	ENSLBEG00000008351	c1d	81	65.873	Labrus_bergylta
ENSODEG00000018885	-	89	78.226	ENSLACG00000007516	C1D	83	78.226	Latimeria_chalumnae
ENSODEG00000018885	-	89	72.000	ENSLOCG00000016024	c1d	85	72.000	Lepisosteus_oculatus
ENSODEG00000018885	-	99	94.928	ENSLAFG00000002083	C1D	98	94.928	Loxodonta_africana
ENSODEG00000018885	-	99	94.203	ENSMFAG00000028681	-	98	94.203	Macaca_fascicularis
ENSODEG00000018885	-	99	95.652	ENSMFAG00000034261	C1D	98	95.652	Macaca_fascicularis
ENSODEG00000018885	-	99	92.029	ENSMFAG00000034034	-	98	92.029	Macaca_fascicularis
ENSODEG00000018885	-	99	91.304	ENSMMUG00000043184	-	98	91.304	Macaca_mulatta
ENSODEG00000018885	-	99	95.652	ENSMMUG00000041557	C1D	99	95.652	Macaca_mulatta
ENSODEG00000018885	-	99	93.478	ENSMMUG00000017209	-	98	93.478	Macaca_mulatta
ENSODEG00000018885	-	99	92.029	ENSMNEG00000020626	-	98	92.029	Macaca_nemestrina
ENSODEG00000018885	-	99	95.652	ENSMNEG00000040612	C1D	98	95.652	Macaca_nemestrina
ENSODEG00000018885	-	99	95.652	ENSMLEG00000027619	C1D	98	95.652	Mandrillus_leucophaeus
ENSODEG00000018885	-	99	92.754	ENSMLEG00000028412	-	98	92.754	Mandrillus_leucophaeus
ENSODEG00000018885	-	92	65.625	ENSMAMG00000022156	c1d	88	64.964	Mastacembelus_armatus
ENSODEG00000018885	-	83	67.241	ENSMZEG00005027343	c1d	86	64.800	Maylandia_zebra
ENSODEG00000018885	-	93	80.620	ENSMGAG00000004517	C1D	91	80.620	Meleagris_gallopavo
ENSODEG00000018885	-	99	88.406	ENSMAUG00000008974	C1d	98	88.406	Mesocricetus_auratus
ENSODEG00000018885	-	99	95.652	ENSMICG00000032141	C1D	98	95.652	Microcebus_murinus
ENSODEG00000018885	-	99	89.130	ENSMOCG00000010860	C1d	98	89.130	Microtus_ochrogaster
ENSODEG00000018885	-	95	65.152	ENSMMOG00000007332	c1d	85	65.152	Mola_mola
ENSODEG00000018885	-	100	80.714	ENSMODG00000003561	C1D	99	80.714	Monodelphis_domestica
ENSODEG00000018885	-	96	63.433	ENSMALG00000020864	c1d	95	64.800	Monopterus_albus
ENSODEG00000018885	-	99	88.406	MGP_CAROLIEiJ_G0016110	C1d	100	90.678	Mus_caroli
ENSODEG00000018885	-	99	88.406	ENSMUSG00000000581	C1d	100	90.678	Mus_musculus
ENSODEG00000018885	-	99	88.406	MGP_PahariEiJ_G0016781	C1d	100	91.525	Mus_pahari
ENSODEG00000018885	-	99	88.406	MGP_SPRETEiJ_G0016952	C1d	100	90.678	Mus_spretus
ENSODEG00000018885	-	99	96.377	ENSMPUG00000006224	C1D	98	96.377	Mustela_putorius_furo
ENSODEG00000018885	-	99	89.130	ENSMLUG00000029990	-	98	89.130	Myotis_lucifugus
ENSODEG00000018885	-	99	90.580	ENSMLUG00000024947	-	98	90.580	Myotis_lucifugus
ENSODEG00000018885	-	99	92.754	ENSMLUG00000010791	-	98	92.754	Myotis_lucifugus
ENSODEG00000018885	-	99	88.406	ENSNGAG00000011872	-	98	88.406	Nannospalax_galili
ENSODEG00000018885	-	88	80.488	ENSNGAG00000012482	-	98	80.488	Nannospalax_galili
ENSODEG00000018885	-	99	81.159	ENSNGAG00000016675	-	98	81.159	Nannospalax_galili
ENSODEG00000018885	-	83	66.379	ENSNBRG00000010704	c1d	86	64.000	Neolamprologus_brichardi
ENSODEG00000018885	-	99	95.652	ENSNLEG00000032919	-	77	95.652	Nomascus_leucogenys
ENSODEG00000018885	-	99	97.101	ENSOPRG00000009586	C1D	98	97.101	Ochotona_princeps
ENSODEG00000018885	-	88	66.667	ENSONIG00000001233	c1d	88	64.394	Oreochromis_niloticus
ENSODEG00000018885	-	78	86.239	ENSOANG00000008385	C1D	98	86.239	Ornithorhynchus_anatinus
ENSODEG00000018885	-	99	93.478	ENSOCUG00000009771	-	98	93.478	Oryctolagus_cuniculus
ENSODEG00000018885	-	99	93.478	ENSOCUG00000025587	-	98	93.478	Oryctolagus_cuniculus
ENSODEG00000018885	-	100	65.468	ENSORLG00000021968	c1d	87	65.468	Oryzias_latipes
ENSODEG00000018885	-	100	65.468	ENSORLG00020000507	c1d	88	65.468	Oryzias_latipes_hni
ENSODEG00000018885	-	90	68.000	ENSORLG00015004594	c1d	80	68.000	Oryzias_latipes_hsok
ENSODEG00000018885	-	95	66.667	ENSOMEG00000004672	c1d	85	66.667	Oryzias_melastigma
ENSODEG00000018885	-	99	95.652	ENSOGAG00000027934	-	98	95.652	Otolemur_garnettii
ENSODEG00000018885	-	99	96.377	ENSOARG00000019931	C1D	97	96.377	Ovis_aries
ENSODEG00000018885	-	99	96.377	ENSPPAG00000037847	-	98	96.377	Pan_paniscus
ENSODEG00000018885	-	99	88.406	ENSPPAG00000040091	-	79	88.406	Pan_paniscus
ENSODEG00000018885	-	99	97.101	ENSPPRG00000017045	-	98	97.101	Panthera_pardus
ENSODEG00000018885	-	99	64.493	ENSPPRG00000022830	-	97	64.493	Panthera_pardus
ENSODEG00000018885	-	99	97.101	ENSPTIG00000009414	C1D	98	97.101	Panthera_tigris_altaica
ENSODEG00000018885	-	99	96.377	ENSPTRG00000023558	C1D	98	96.377	Pan_troglodytes
ENSODEG00000018885	-	99	92.029	ENSPANG00000000501	-	98	92.029	Papio_anubis
ENSODEG00000018885	-	99	95.652	ENSPANG00000002886	C1D	77	95.652	Papio_anubis
ENSODEG00000018885	-	90	66.667	ENSPKIG00000004877	c1d	85	66.667	Paramormyrops_kingsleyae
ENSODEG00000018885	-	94	81.679	ENSPSIG00000010015	C1D	90	81.679	Pelodiscus_sinensis
ENSODEG00000018885	-	93	62.791	ENSPMGG00000009326	c1d	85	62.879	Periophthalmus_magnuspinnatus
ENSODEG00000018885	-	100	82.143	ENSPCIG00000018629	-	99	82.143	Phascolarctos_cinereus
ENSODEG00000018885	-	99	76.812	ENSPCIG00000006831	-	96	76.812	Phascolarctos_cinereus
ENSODEG00000018885	-	98	64.706	ENSPFOG00000003686	c1d	88	64.706	Poecilia_formosa
ENSODEG00000018885	-	98	64.706	ENSPLAG00000000228	c1d	96	64.706	Poecilia_latipinna
ENSODEG00000018885	-	98	64.706	ENSPMEG00000023213	c1d	88	64.706	Poecilia_mexicana
ENSODEG00000018885	-	99	64.493	ENSPREG00000000742	c1d	97	64.493	Poecilia_reticulata
ENSODEG00000018885	-	99	96.377	ENSPPYG00000012354	C1D	76	96.377	Pongo_abelii
ENSODEG00000018885	-	99	89.855	ENSPPYG00000002294	-	98	89.855	Pongo_abelii
ENSODEG00000018885	-	99	82.609	ENSPCAG00000010088	C1D	77	82.609	Procavia_capensis
ENSODEG00000018885	-	99	95.652	ENSPCOG00000016112	C1D	98	95.652	Propithecus_coquereli
ENSODEG00000018885	-	99	96.377	ENSPVAG00000012692	C1D	77	96.377	Pteropus_vampyrus
ENSODEG00000018885	-	83	67.241	ENSPNYG00000008789	c1d	86	64.800	Pundamilia_nyererei
ENSODEG00000018885	-	89	70.161	ENSPNAG00000004219	c1d	85	70.161	Pygocentrus_nattereri
ENSODEG00000018885	-	99	89.130	ENSRNOG00000005982	C1d	98	89.130	Rattus_norvegicus
ENSODEG00000018885	-	99	91.304	ENSRBIG00000026211	-	98	91.304	Rhinopithecus_bieti
ENSODEG00000018885	-	99	95.652	ENSRROG00000029013	C1D	98	95.652	Rhinopithecus_roxellana
ENSODEG00000018885	-	99	91.304	ENSRROG00000005944	-	98	91.304	Rhinopithecus_roxellana
ENSODEG00000018885	-	99	96.377	ENSSBOG00000025275	C1D	98	96.377	Saimiri_boliviensis_boliviensis
ENSODEG00000018885	-	100	81.429	ENSSHAG00000008352	C1D	67	81.429	Sarcophilus_harrisii
ENSODEG00000018885	-	89	68.800	ENSSFOG00015010861	c1d	89	68.800	Scleropages_formosus
ENSODEG00000018885	-	95	61.364	ENSSMAG00000019230	c1d	85	61.364	Scophthalmus_maximus
ENSODEG00000018885	-	95	65.152	ENSSDUG00000020213	c1d	85	65.152	Seriola_dumerili
ENSODEG00000018885	-	99	63.043	ENSSLDG00000017371	c1d	89	63.043	Seriola_lalandi_dorsalis
ENSODEG00000018885	-	91	78.571	ENSSPUG00000006525	C1D	87	78.740	Sphenodon_punctatus
ENSODEG00000018885	-	94	66.923	ENSSPAG00000008574	c1d	85	66.667	Stegastes_partitus
ENSODEG00000018885	-	99	96.377	ENSSSCG00000039331	-	98	96.377	Sus_scrofa
ENSODEG00000018885	-	86	75.833	ENSSSCG00000035701	-	100	75.833	Sus_scrofa
ENSODEG00000018885	-	95	80.597	ENSTGUG00000002367	C1D	93	80.597	Taeniopygia_guttata
ENSODEG00000018885	-	88	64.754	ENSTRUG00000012245	c1d	73	64.754	Takifugu_rubripes
ENSODEG00000018885	-	100	59.712	ENSTNIG00000009827	c1d	94	59.712	Tetraodon_nigroviridis
ENSODEG00000018885	-	99	94.928	ENSTBEG00000009797	C1D	98	94.928	Tupaia_belangeri
ENSODEG00000018885	-	99	95.652	ENSTTRG00000013982	C1D	79	95.652	Tursiops_truncatus
ENSODEG00000018885	-	99	82.270	ENSUAMG00000025246	C1D	98	82.270	Ursus_americanus
ENSODEG00000018885	-	73	75.962	ENSUMAG00000006451	-	91	75.439	Ursus_maritimus
ENSODEG00000018885	-	99	97.101	ENSUMAG00000021118	-	98	97.101	Ursus_maritimus
ENSODEG00000018885	-	99	95.652	ENSVPAG00000012080	C1D	78	95.652	Vicugna_pacos
ENSODEG00000018885	-	99	94.203	ENSVVUG00000027629	C1D	86	94.203	Vulpes_vulpes
ENSODEG00000018885	-	100	70.423	ENSXETG00000025934	c1d	98	70.423	Xenopus_tropicalis
ENSODEG00000018885	-	90	67.200	ENSXCOG00000013813	c1d	88	63.971	Xiphophorus_couchianus
ENSODEG00000018885	-	90	66.400	ENSXMAG00000022273	c1d	88	63.235	Xiphophorus_maculatus