EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019065 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 564 bases
Position: chrJH651659.1:5913987-5914550
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025757	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026130	-	564	-	ENSODEP00000025757	187 (aa)	-	-

Gene Model

Click here to download ENSODEG00000019065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019065's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019065	-	88	36.571	ENSODEG00000002594	-	62	36.571
ENSODEG00000019065	-	90	42.105	ENSODEG00000003833	RAB30	84	42.105
ENSODEG00000019065	-	88	35.882	ENSODEG00000009994	RERG	83	35.882
ENSODEG00000019065	-	89	34.320	ENSODEG00000006414	RAB12	77	35.503
ENSODEG00000019065	-	100	77.249	ENSODEG00000003860	RAB5B	87	77.249
ENSODEG00000019065	-	93	43.750	ENSODEG00000005942	RAB6A	84	43.750
ENSODEG00000019065	-	87	43.293	ENSODEG00000011371	RAB11B	75	43.293
ENSODEG00000019065	-	90	40.000	ENSODEG00000002013	RAB14	79	40.000
ENSODEG00000019065	-	85	36.646	ENSODEG00000016056	RAB23	67	36.646
ENSODEG00000019065	-	88	38.596	ENSODEG00000011726	RAB33A	72	38.596
ENSODEG00000019065	-	64	31.405	ENSODEG00000009293	ARL8B	63	31.405
ENSODEG00000019065	-	83	30.435	ENSODEG00000012270	RAB34	62	30.435
ENSODEG00000019065	-	87	34.940	ENSODEG00000000520	RAB39B	78	34.940
ENSODEG00000019065	-	89	45.665	ENSODEG00000000054	RAB22A	87	45.665
ENSODEG00000019065	-	86	30.120	ENSODEG00000007488	DNAJC27	61	30.120
ENSODEG00000019065	-	78	86.486	ENSODEG00000000290	-	99	86.486
ENSODEG00000019065	-	87	42.683	ENSODEG00000016878	-	75	42.683
ENSODEG00000019065	-	88	39.759	ENSODEG00000016788	-	82	40.244
ENSODEG00000019065	-	84	39.506	ENSODEG00000013827	RAB15	75	39.506
ENSODEG00000019065	-	84	42.405	ENSODEG00000011248	-	81	42.857
ENSODEG00000019065	-	89	33.526	ENSODEG00000019004	RAB9A	86	33.526
ENSODEG00000019065	-	87	40.854	ENSODEG00000009908	RAB25	77	40.854
ENSODEG00000019065	-	88	32.941	ENSODEG00000015703	HRAS	87	32.941
ENSODEG00000019065	-	90	40.936	ENSODEG00000001343	RAB2B	78	40.936
ENSODEG00000019065	-	100	82.199	ENSODEG00000017920	RAB5C	88	82.199
ENSODEG00000019065	-	86	40.741	ENSODEG00000004150	-	78	40.741
ENSODEG00000019065	-	88	33.529	ENSODEG00000010412	KRAS	89	33.140
ENSODEG00000019065	-	83	37.654	ENSODEG00000002835	RAB7A	99	37.654
ENSODEG00000019065	-	88	38.286	ENSODEG00000002979	RAB33B	75	38.286
ENSODEG00000019065	-	87	39.521	ENSODEG00000010443	-	80	39.521
ENSODEG00000019065	-	87	40.854	ENSODEG00000002369	-	77	40.854
ENSODEG00000019065	-	83	33.758	ENSODEG00000009963	RHEB	85	33.758
ENSODEG00000019065	-	83	32.099	ENSODEG00000009016	RAB36	55	32.099
ENSODEG00000019065	-	63	39.837	ENSODEG00000012634	-	94	39.837
ENSODEG00000019065	-	86	33.735	ENSODEG00000007937	NRAS	85	33.735
ENSODEG00000019065	-	83	41.358	ENSODEG00000010425	RAB24	79	42.593
ENSODEG00000019065	-	88	43.636	ENSODEG00000017847	-	82	43.636
ENSODEG00000019065	-	90	37.278	ENSODEG00000007219	RAB35	83	37.725

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019065	-	100	88.947	ENSG00000144566	RAB5A	87	92.593	Homo_sapiens
ENSODEG00000019065	-	99	86.316	ENSAPOG00000021391	rab5aa	87	86.316	Acanthochromis_polyacanthus
ENSODEG00000019065	-	100	89.474	ENSAMEG00000000954	RAB5A	87	89.474	Ailuropoda_melanoleuca
ENSODEG00000019065	-	99	86.842	ENSACIG00000019251	rab5aa	87	86.842	Amphilophus_citrinellus
ENSODEG00000019065	-	99	86.842	ENSAOCG00000000090	rab5aa	87	86.842	Amphiprion_ocellaris
ENSODEG00000019065	-	99	86.842	ENSAPEG00000013376	rab5aa	87	86.842	Amphiprion_percula
ENSODEG00000019065	-	99	86.842	ENSATEG00000014748	rab5aa	87	86.842	Anabas_testudineus
ENSODEG00000019065	-	100	87.368	ENSACAG00000000017	RAB5A	87	87.368	Anolis_carolinensis
ENSODEG00000019065	-	100	89.474	ENSANAG00000025120	RAB5A	87	89.474	Aotus_nancymaae
ENSODEG00000019065	-	99	87.368	ENSACLG00000018066	rab5aa	87	87.368	Astatotilapia_calliptera
ENSODEG00000019065	-	99	84.817	ENSAMXG00000035919	rab5ab	87	84.817	Astyanax_mexicanus
ENSODEG00000019065	-	99	86.772	ENSAMXG00000036179	rab5aa	87	86.772	Astyanax_mexicanus
ENSODEG00000019065	-	100	89.474	ENSBTAG00000046385	RAB5A	87	89.474	Bos_taurus
ENSODEG00000019065	-	100	89.474	ENSCJAG00000048394	RAB5A	87	89.474	Callithrix_jacchus
ENSODEG00000019065	-	100	89.474	ENSCAFG00000005814	RAB5A	87	89.474	Canis_familiaris
ENSODEG00000019065	-	100	89.474	ENSCAFG00020027287	RAB5A	87	89.474	Canis_lupus_dingo
ENSODEG00000019065	-	100	88.947	ENSCHIG00000025419	-	87	88.947	Capra_hircus
ENSODEG00000019065	-	100	88.947	ENSTSYG00000007642	-	87	88.947	Carlito_syrichta
ENSODEG00000019065	-	100	82.540	ENSTSYG00000030238	-	94	78.289	Carlito_syrichta
ENSODEG00000019065	-	100	89.474	ENSCCAG00000022405	RAB5A	87	89.474	Cebus_capucinus
ENSODEG00000019065	-	100	89.474	ENSCATG00000033588	-	87	89.474	Cercocebus_atys
ENSODEG00000019065	-	100	90.000	ENSCLAG00000006053	-	87	90.000	Chinchilla_lanigera
ENSODEG00000019065	-	100	89.474	ENSCSAG00000009831	RAB5A	87	89.474	Chlorocebus_sabaeus
ENSODEG00000019065	-	99	87.302	ENSCPBG00000022559	RAB5A	87	87.302	Chrysemys_picta_bellii
ENSODEG00000019065	-	100	89.474	ENSCANG00000043514	RAB5A	87	89.474	Colobus_angolensis_palliatus
ENSODEG00000019065	-	100	88.421	ENSCGRG00001020018	-	87	88.421	Cricetulus_griseus_chok1gshd
ENSODEG00000019065	-	100	88.421	ENSCGRG00000002786	-	87	88.421	Cricetulus_griseus_crigri
ENSODEG00000019065	-	99	87.368	ENSCVAG00000008239	rab5aa	87	87.368	Cyprinodon_variegatus
ENSODEG00000019065	-	99	86.316	ENSDARG00000018602	rab5aa	87	86.316	Danio_rerio
ENSODEG00000019065	-	99	85.789	ENSDARG00000007257	rab5ab	87	85.789	Danio_rerio
ENSODEG00000019065	-	100	88.947	ENSDNOG00000038467	RAB5A	87	88.947	Dasypus_novemcinctus
ENSODEG00000019065	-	100	89.474	ENSDORG00000024958	-	87	89.474	Dipodomys_ordii
ENSODEG00000019065	-	100	89.474	ENSEASG00005005818	RAB5A	87	89.474	Equus_asinus_asinus
ENSODEG00000019065	-	100	89.474	ENSECAG00000019062	RAB5A	87	89.474	Equus_caballus
ENSODEG00000019065	-	100	89.474	ENSEEUG00000009044	RAB5A	87	89.474	Erinaceus_europaeus
ENSODEG00000019065	-	99	85.789	ENSELUG00000013436	rab5ab	87	85.789	Esox_lucius
ENSODEG00000019065	-	99	86.772	ENSELUG00000006462	rab5aa	87	86.772	Esox_lucius
ENSODEG00000019065	-	100	89.474	ENSFCAG00000039795	-	87	89.474	Felis_catus
ENSODEG00000019065	-	100	87.895	ENSFALG00000009239	RAB5A	87	87.895	Ficedula_albicollis
ENSODEG00000019065	-	100	89.474	ENSFDAG00000005631	-	87	89.474	Fukomys_damarensis
ENSODEG00000019065	-	99	87.368	ENSFHEG00000014070	rab5aa	87	87.368	Fundulus_heteroclitus
ENSODEG00000019065	-	99	85.789	ENSGMOG00000002868	rab5aa	87	85.789	Gadus_morhua
ENSODEG00000019065	-	96	83.060	ENSGMOG00000007127	RAB5A	99	83.060	Gadus_morhua
ENSODEG00000019065	-	100	87.895	ENSGALG00000011272	RAB5A	87	87.895	Gallus_gallus
ENSODEG00000019065	-	99	86.316	ENSGAFG00000011619	rab5aa	87	86.316	Gambusia_affinis
ENSODEG00000019065	-	99	86.772	ENSGACG00000004997	rab5aa	87	86.772	Gasterosteus_aculeatus
ENSODEG00000019065	-	99	87.831	ENSGAGG00000005319	RAB5A	87	87.831	Gopherus_agassizii
ENSODEG00000019065	-	100	88.947	ENSGGOG00000015981	RAB5A	87	88.947	Gorilla_gorilla
ENSODEG00000019065	-	99	87.368	ENSHBUG00000003752	rab5aa	87	87.368	Haplochromis_burtoni
ENSODEG00000019065	-	100	89.474	ENSHGLG00000006357	-	90	89.474	Heterocephalus_glaber_female
ENSODEG00000019065	-	99	80.851	ENSHGLG00000017749	-	85	80.851	Heterocephalus_glaber_female
ENSODEG00000019065	-	100	89.474	ENSHGLG00100007553	RAB5A	87	89.474	Heterocephalus_glaber_male
ENSODEG00000019065	-	98	81.720	ENSHGLG00100008816	-	84	81.720	Heterocephalus_glaber_male
ENSODEG00000019065	-	99	84.817	ENSIPUG00000023392	rab5a	87	84.817	Ictalurus_punctatus
ENSODEG00000019065	-	100	89.474	ENSSTOG00000026229	RAB5A	87	89.474	Ictidomys_tridecemlineatus
ENSODEG00000019065	-	100	88.421	ENSJJAG00000020190	Rab5a	87	88.421	Jaculus_jaculus
ENSODEG00000019065	-	99	86.842	ENSKMAG00000005111	rab5aa	87	86.842	Kryptolebias_marmoratus
ENSODEG00000019065	-	97	86.413	ENSLBEG00000002516	rab5aa	81	86.413	Labrus_bergylta
ENSODEG00000019065	-	100	86.387	ENSLACG00000004663	RAB5A	88	86.387	Latimeria_chalumnae
ENSODEG00000019065	-	100	85.864	ENSLOCG00000006591	rab5ab	88	85.864	Lepisosteus_oculatus
ENSODEG00000019065	-	100	89.474	ENSLAFG00000008321	RAB5A	87	89.474	Loxodonta_africana
ENSODEG00000019065	-	100	89.474	ENSMFAG00000002326	RAB5A	87	89.474	Macaca_fascicularis
ENSODEG00000019065	-	95	88.398	ENSMMUG00000006992	RAB5A	91	88.398	Macaca_mulatta
ENSODEG00000019065	-	79	82.000	ENSMMUG00000032398	-	87	82.000	Macaca_mulatta
ENSODEG00000019065	-	100	89.474	ENSMNEG00000039149	-	87	89.474	Macaca_nemestrina
ENSODEG00000019065	-	100	89.474	ENSMLEG00000028944	RAB5A	87	89.474	Mandrillus_leucophaeus
ENSODEG00000019065	-	99	86.842	ENSMAMG00000012573	rab5aa	87	86.842	Mastacembelus_armatus
ENSODEG00000019065	-	99	87.368	ENSMZEG00005005205	rab5aa	87	87.368	Maylandia_zebra
ENSODEG00000019065	-	100	87.895	ENSMGAG00000010961	RAB5A	87	87.895	Meleagris_gallopavo
ENSODEG00000019065	-	100	89.474	ENSMAUG00000011242	-	87	89.474	Mesocricetus_auratus
ENSODEG00000019065	-	100	89.474	ENSMICG00000049130	RAB5A	87	89.474	Microcebus_murinus
ENSODEG00000019065	-	100	89.474	ENSMOCG00000009706	Rab5a	87	89.474	Microtus_ochrogaster
ENSODEG00000019065	-	99	85.789	ENSMMOG00000019135	rab5aa	87	85.789	Mola_mola
ENSODEG00000019065	-	100	87.895	ENSMODG00000014793	RAB5A	97	86.740	Monodelphis_domestica
ENSODEG00000019065	-	99	85.789	ENSMALG00000014929	rab5aa	87	85.789	Monopterus_albus
ENSODEG00000019065	-	100	89.474	MGP_CAROLIEiJ_G0021741	Rab5a	98	88.398	Mus_caroli
ENSODEG00000019065	-	100	89.474	ENSMUSG00000017831	Rab5a	87	89.474	Mus_musculus
ENSODEG00000019065	-	99	85.638	MGP_PahariEiJ_G0020730	Rab5a	99	85.638	Mus_pahari
ENSODEG00000019065	-	100	89.474	ENSMPUG00000013147	RAB5A	87	89.474	Mustela_putorius_furo
ENSODEG00000019065	-	100	89.474	ENSMLUG00000011716	RAB5A	87	89.474	Myotis_lucifugus
ENSODEG00000019065	-	100	88.947	ENSNGAG00000021245	-	87	88.947	Nannospalax_galili
ENSODEG00000019065	-	99	87.368	ENSNBRG00000011763	rab5aa	87	87.368	Neolamprologus_brichardi
ENSODEG00000019065	-	100	88.947	ENSNLEG00000003434	RAB5A	87	88.947	Nomascus_leucogenys
ENSODEG00000019065	-	94	88.268	ENSOPRG00000011278	RAB5A	100	88.268	Ochotona_princeps
ENSODEG00000019065	-	99	87.368	ENSONIG00000002425	rab5aa	87	87.368	Oreochromis_niloticus
ENSODEG00000019065	-	100	88.889	ENSOANG00000004989	RAB5A	86	88.889	Ornithorhynchus_anatinus
ENSODEG00000019065	-	100	89.474	ENSOCUG00000012200	RAB5A	87	89.474	Oryctolagus_cuniculus
ENSODEG00000019065	-	99	85.789	ENSORLG00000012261	rab5aa	87	85.789	Oryzias_latipes
ENSODEG00000019065	-	99	85.789	ENSORLG00020020922	rab5aa	87	85.789	Oryzias_latipes_hni
ENSODEG00000019065	-	99	85.789	ENSORLG00015012854	rab5aa	87	85.789	Oryzias_latipes_hsok
ENSODEG00000019065	-	99	85.106	ENSORLG00015017737	rab5ab	87	85.106	Oryzias_latipes_hsok
ENSODEG00000019065	-	99	86.316	ENSOMEG00000010692	rab5aa	87	86.316	Oryzias_melastigma
ENSODEG00000019065	-	100	88.947	ENSOARG00000015722	RAB5A	87	88.947	Ovis_aries
ENSODEG00000019065	-	100	88.947	ENSPPAG00000041763	RAB5A	87	88.947	Pan_paniscus
ENSODEG00000019065	-	100	89.474	ENSPPRG00000001655	-	87	89.474	Panthera_pardus
ENSODEG00000019065	-	100	89.474	ENSPTIG00000021685	RAB5A	87	89.474	Panthera_tigris_altaica
ENSODEG00000019065	-	100	88.947	ENSPTRG00000014682	RAB5A	87	88.947	Pan_troglodytes
ENSODEG00000019065	-	100	89.474	ENSPANG00000001328	RAB5A	87	89.474	Papio_anubis
ENSODEG00000019065	-	99	86.842	ENSPKIG00000009578	rab5ab	87	86.842	Paramormyrops_kingsleyae
ENSODEG00000019065	-	99	84.737	ENSPKIG00000010291	RAB5A	87	84.737	Paramormyrops_kingsleyae
ENSODEG00000019065	-	100	87.895	ENSPSIG00000007157	RAB5A	87	87.895	Pelodiscus_sinensis
ENSODEG00000019065	-	99	86.842	ENSPMGG00000001915	rab5aa	87	86.842	Periophthalmus_magnuspinnatus
ENSODEG00000019065	-	100	88.947	ENSPCIG00000018321	RAB5A	87	88.947	Phascolarctos_cinereus
ENSODEG00000019065	-	99	86.842	ENSPFOG00000011263	rab5aa	87	86.842	Poecilia_formosa
ENSODEG00000019065	-	99	86.842	ENSPLAG00000017838	rab5aa	87	86.842	Poecilia_latipinna
ENSODEG00000019065	-	99	86.842	ENSPMEG00000007238	rab5aa	87	86.842	Poecilia_mexicana
ENSODEG00000019065	-	100	88.947	ENSPPYG00000014074	RAB5A	87	88.947	Pongo_abelii
ENSODEG00000019065	-	100	89.474	ENSPCOG00000013289	RAB5A	87	89.474	Propithecus_coquereli
ENSODEG00000019065	-	100	88.947	ENSPVAG00000006730	RAB5A	87	88.947	Pteropus_vampyrus
ENSODEG00000019065	-	99	87.368	ENSPNYG00000010612	rab5aa	87	87.368	Pundamilia_nyererei
ENSODEG00000019065	-	100	84.375	ENSPNAG00000009496	rab5ab	88	84.375	Pygocentrus_nattereri
ENSODEG00000019065	-	99	86.772	ENSPNAG00000023223	rab5aa	87	86.772	Pygocentrus_nattereri
ENSODEG00000019065	-	100	89.474	ENSRBIG00000036122	RAB5A	87	89.474	Rhinopithecus_bieti
ENSODEG00000019065	-	100	89.474	ENSRROG00000037687	RAB5A	87	89.474	Rhinopithecus_roxellana
ENSODEG00000019065	-	100	88.482	ENSSHAG00000006787	RAB5A	88	88.482	Sarcophilus_harrisii
ENSODEG00000019065	-	97	85.946	ENSSFOG00015021115	-	85	85.946	Scleropages_formosus
ENSODEG00000019065	-	99	86.842	ENSSFOG00015014517	rab5a	87	86.842	Scleropages_formosus
ENSODEG00000019065	-	99	86.316	ENSSMAG00000009229	rab5aa	87	86.316	Scophthalmus_maximus
ENSODEG00000019065	-	99	86.842	ENSSDUG00000009835	rab5aa	87	86.842	Seriola_dumerili
ENSODEG00000019065	-	99	86.842	ENSSLDG00000011069	rab5aa	87	86.842	Seriola_lalandi_dorsalis
ENSODEG00000019065	-	99	87.831	ENSSPUG00000001173	RAB5A	96	87.831	Sphenodon_punctatus
ENSODEG00000019065	-	99	86.316	ENSSPAG00000015678	rab5aa	87	86.316	Stegastes_partitus
ENSODEG00000019065	-	100	89.474	ENSSSCG00000037653	RAB5A	87	89.474	Sus_scrofa
ENSODEG00000019065	-	100	87.895	ENSTGUG00000003236	RAB5A	87	87.895	Taeniopygia_guttata
ENSODEG00000019065	-	99	85.789	ENSTRUG00000024368	rab5aa	87	85.789	Takifugu_rubripes
ENSODEG00000019065	-	99	85.789	ENSTNIG00000009196	rab5aa	87	85.789	Tetraodon_nigroviridis
ENSODEG00000019065	-	100	89.474	ENSTTRG00000001374	RAB5A	87	89.474	Tursiops_truncatus
ENSODEG00000019065	-	95	88.398	ENSUAMG00000027471	RAB5A	97	88.398	Ursus_americanus
ENSODEG00000019065	-	100	89.474	ENSUMAG00000018295	RAB5A	87	89.474	Ursus_maritimus
ENSODEG00000019065	-	100	89.474	ENSVVUG00000000489	RAB5A	87	89.474	Vulpes_vulpes
ENSODEG00000019065	-	99	86.316	ENSXETG00000002305	rab5a	87	86.316	Xenopus_tropicalis
ENSODEG00000019065	-	99	86.316	ENSXCOG00000020121	rab5aa	87	86.316	Xiphophorus_couchianus
ENSODEG00000019065	-	99	86.842	ENSXMAG00000028889	rab5aa	87	86.842	Xiphophorus_maculatus