EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019111 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 2427 bases
Position: chrJH651624.1:5181564-5183990
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025793	zf-RanBP	PF00641.18	8.2e-10	1	1
ENSODEP00000025793	RRM_1	PF00076.22	2.7e-10	1	1
ENSODEP00000025793	G-patch	PF01585.23	4.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026176	-	2427	-	ENSODEP00000025793	808 (aa)	-	-

Gene Model

Click here to download ENSODEG00000019111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019111	-	98	49.546	ENSODEG00000008955	RBM10	92	52.152
ENSODEG00000019111	-	100	92.005	ENSODEG00000016254	-	100	92.005

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019111	-	100	91.411	ENSG00000003756	RBM5	100	91.411	Homo_sapiens
ENSODEG00000019111	-	100	59.425	ENSAPOG00000016625	rbm5	100	59.122	Acanthochromis_polyacanthus
ENSODEG00000019111	-	100	57.957	ENSAPOG00000006011	-	100	58.164	Acanthochromis_polyacanthus
ENSODEG00000019111	-	100	91.411	ENSAMEG00000012005	RBM5	100	91.411	Ailuropoda_melanoleuca
ENSODEG00000019111	-	99	56.136	ENSACIG00000021310	-	99	55.636	Amphilophus_citrinellus
ENSODEG00000019111	-	76	57.211	ENSACIG00000007571	rbm5	100	66.755	Amphilophus_citrinellus
ENSODEG00000019111	-	99	56.724	ENSAOCG00000017312	-	99	57.475	Amphiprion_ocellaris
ENSODEG00000019111	-	100	59.724	ENSAOCG00000002880	rbm5	100	59.791	Amphiprion_ocellaris
ENSODEG00000019111	-	100	58.076	ENSAPEG00000018222	RBM5	100	58.164	Amphiprion_percula
ENSODEG00000019111	-	90	58.899	ENSAPEG00000011862	rbm5	91	58.968	Amphiprion_percula
ENSODEG00000019111	-	100	58.966	ENSATEG00000024663	rbm5	100	59.560	Anabas_testudineus
ENSODEG00000019111	-	100	56.674	ENSATEG00000003838	-	100	55.569	Anabas_testudineus
ENSODEG00000019111	-	94	81.545	ENSAPLG00000011176	RBM5	99	81.662	Anas_platyrhynchos
ENSODEG00000019111	-	100	79.376	ENSACAG00000008580	RBM5	100	79.592	Anolis_carolinensis
ENSODEG00000019111	-	100	91.288	ENSANAG00000025199	RBM5	100	91.288	Aotus_nancymaae
ENSODEG00000019111	-	89	70.732	ENSACLG00000024198	RBM5	100	71.429	Astatotilapia_calliptera
ENSODEG00000019111	-	100	59.606	ENSACLG00000012748	rbm5	100	60.280	Astatotilapia_calliptera
ENSODEG00000019111	-	85	61.295	ENSAMXG00000008146	rbm5	99	62.657	Astyanax_mexicanus
ENSODEG00000019111	-	100	90.920	ENSBTAG00000006330	RBM5	100	90.920	Bos_taurus
ENSODEG00000019111	-	100	91.288	ENSCJAG00000004740	RBM5	100	91.288	Callithrix_jacchus
ENSODEG00000019111	-	100	91.534	ENSCAFG00000010866	RBM5	100	91.534	Canis_familiaris
ENSODEG00000019111	-	100	91.534	ENSCAFG00020022126	RBM5	100	91.534	Canis_lupus_dingo
ENSODEG00000019111	-	100	91.166	ENSCHIG00000018435	RBM5	100	91.166	Capra_hircus
ENSODEG00000019111	-	86	90.831	ENSTSYG00000004158	RBM5	100	90.831	Carlito_syrichta
ENSODEG00000019111	-	99	75.679	ENSCAPG00000013495	RBM5	100	74.507	Cavia_aperea
ENSODEG00000019111	-	100	91.882	ENSCPOG00000008151	RBM5	100	91.882	Cavia_porcellus
ENSODEG00000019111	-	99	91.481	ENSCCAG00000026401	RBM5	99	91.481	Cebus_capucinus
ENSODEG00000019111	-	100	91.411	ENSCATG00000041038	RBM5	100	91.411	Cercocebus_atys
ENSODEG00000019111	-	100	92.128	ENSCLAG00000007873	RBM5	100	92.128	Chinchilla_lanigera
ENSODEG00000019111	-	100	91.411	ENSCSAG00000014401	RBM5	100	91.411	Chlorocebus_sabaeus
ENSODEG00000019111	-	81	79.728	ENSCHOG00000009429	RBM5	85	80.938	Choloepus_hoffmanni
ENSODEG00000019111	-	100	80.579	ENSCPBG00000002406	RBM5	100	81.303	Chrysemys_picta_bellii
ENSODEG00000019111	-	100	88.957	ENSCANG00000031250	RBM5	100	88.957	Colobus_angolensis_palliatus
ENSODEG00000019111	-	100	90.798	ENSCGRG00001010543	Rbm5	100	90.798	Cricetulus_griseus_chok1gshd
ENSODEG00000019111	-	100	90.798	ENSCGRG00000008475	Rbm5	100	90.798	Cricetulus_griseus_crigri
ENSODEG00000019111	-	98	57.422	ENSCSEG00000000596	rbm5	97	57.963	Cynoglossus_semilaevis
ENSODEG00000019111	-	100	59.049	ENSCVAG00000005655	rbm5	100	59.837	Cyprinodon_variegatus
ENSODEG00000019111	-	100	55.437	ENSDARG00000098280	rbm5	100	59.603	Danio_rerio
ENSODEG00000019111	-	100	91.534	ENSDNOG00000011756	RBM5	100	91.534	Dasypus_novemcinctus
ENSODEG00000019111	-	100	91.656	ENSDORG00000007692	Rbm5	100	91.656	Dipodomys_ordii
ENSODEG00000019111	-	92	84.667	ENSETEG00000012773	RBM5	93	84.656	Echinops_telfairi
ENSODEG00000019111	-	94	47.933	ENSEBUG00000017034	rbm5	87	48.118	Eptatretus_burgeri
ENSODEG00000019111	-	100	91.656	ENSEASG00005011835	RBM5	100	91.656	Equus_asinus_asinus
ENSODEG00000019111	-	100	91.656	ENSECAG00000020447	RBM5	100	91.656	Equus_caballus
ENSODEG00000019111	-	90	92.079	ENSEEUG00000005943	RBM5	91	92.079	Erinaceus_europaeus
ENSODEG00000019111	-	100	61.894	ENSELUG00000022467	rbm5	100	60.255	Esox_lucius
ENSODEG00000019111	-	100	91.411	ENSFCAG00000014639	RBM5	100	91.411	Felis_catus
ENSODEG00000019111	-	98	77.737	ENSFALG00000008828	RBM5	83	82.190	Ficedula_albicollis
ENSODEG00000019111	-	100	89.066	ENSFDAG00000001897	RBM5	100	89.066	Fukomys_damarensis
ENSODEG00000019111	-	92	72.093	ENSFHEG00000015954	rbm5	100	72.093	Fundulus_heteroclitus
ENSODEG00000019111	-	100	46.433	ENSGMOG00000007810	-	100	45.278	Gadus_morhua
ENSODEG00000019111	-	99	60.558	ENSGMOG00000016224	rbm5	100	60.727	Gadus_morhua
ENSODEG00000019111	-	93	82.034	ENSGALG00000039288	RBM5	83	81.003	Gallus_gallus
ENSODEG00000019111	-	100	59.060	ENSGAFG00000010690	rbm5	100	59.513	Gambusia_affinis
ENSODEG00000019111	-	100	60.384	ENSGACG00000010469	rbm5	100	58.935	Gasterosteus_aculeatus
ENSODEG00000019111	-	100	55.648	ENSGACG00000000858	-	99	57.946	Gasterosteus_aculeatus
ENSODEG00000019111	-	95	80.784	ENSGAGG00000007935	RBM5	99	81.037	Gopherus_agassizii
ENSODEG00000019111	-	100	91.288	ENSGGOG00000014490	RBM5	100	91.288	Gorilla_gorilla
ENSODEG00000019111	-	100	59.127	ENSHBUG00000001941	rbm5	100	59.560	Haplochromis_burtoni
ENSODEG00000019111	-	89	70.732	ENSHBUG00000011901	-	100	71.429	Haplochromis_burtoni
ENSODEG00000019111	-	100	91.769	ENSHGLG00000014844	RBM5	100	91.769	Heterocephalus_glaber_female
ENSODEG00000019111	-	100	91.882	ENSHGLG00100010739	RBM5	100	91.882	Heterocephalus_glaber_male
ENSODEG00000019111	-	95	56.136	ENSHCOG00000017110	rbm5	99	57.353	Hippocampus_comes
ENSODEG00000019111	-	100	51.708	ENSHCOG00000004536	-	100	50.514	Hippocampus_comes
ENSODEG00000019111	-	100	62.000	ENSIPUG00000000640	rbm5	100	62.278	Ictalurus_punctatus
ENSODEG00000019111	-	100	91.166	ENSSTOG00000013856	RBM5	100	91.166	Ictidomys_tridecemlineatus
ENSODEG00000019111	-	100	91.288	ENSJJAG00000008844	Rbm5	100	91.288	Jaculus_jaculus
ENSODEG00000019111	-	100	58.400	ENSKMAG00000006663	rbm5	100	59.602	Kryptolebias_marmoratus
ENSODEG00000019111	-	100	56.517	ENSLBEG00000010877	-	94	56.770	Labrus_bergylta
ENSODEG00000019111	-	73	49.406	ENSLBEG00000002522	-	94	49.066	Labrus_bergylta
ENSODEG00000019111	-	100	58.228	ENSLBEG00000020858	rbm5	100	58.891	Labrus_bergylta
ENSODEG00000019111	-	99	70.610	ENSLACG00000016572	RBM5	100	73.269	Latimeria_chalumnae
ENSODEG00000019111	-	100	63.303	ENSLOCG00000010774	rbm5	100	62.601	Lepisosteus_oculatus
ENSODEG00000019111	-	100	91.176	ENSLAFG00000006733	RBM5	100	91.054	Loxodonta_africana
ENSODEG00000019111	-	100	91.411	ENSMFAG00000031609	RBM5	100	91.411	Macaca_fascicularis
ENSODEG00000019111	-	99	91.481	ENSMMUG00000004921	RBM5	99	91.481	Macaca_mulatta
ENSODEG00000019111	-	100	91.534	ENSMNEG00000044394	RBM5	100	91.534	Macaca_nemestrina
ENSODEG00000019111	-	100	88.315	ENSMLEG00000034689	RBM5	100	88.315	Mandrillus_leucophaeus
ENSODEG00000019111	-	91	72.093	ENSMAMG00000017277	rbm5	99	72.093	Mastacembelus_armatus
ENSODEG00000019111	-	100	58.314	ENSMAMG00000023948	-	100	57.978	Mastacembelus_armatus
ENSODEG00000019111	-	100	59.606	ENSMZEG00005015328	rbm5	100	60.280	Maylandia_zebra
ENSODEG00000019111	-	100	54.801	ENSMZEG00005010035	-	100	54.946	Maylandia_zebra
ENSODEG00000019111	-	93	82.011	ENSMGAG00000003972	RBM5	100	82.011	Meleagris_gallopavo
ENSODEG00000019111	-	99	90.864	ENSMAUG00000020572	Rbm5	98	90.864	Mesocricetus_auratus
ENSODEG00000019111	-	100	91.534	ENSMICG00000016179	RBM5	100	91.534	Microcebus_murinus
ENSODEG00000019111	-	100	90.675	ENSMOCG00000017479	Rbm5	100	90.675	Microtus_ochrogaster
ENSODEG00000019111	-	100	54.556	ENSMMOG00000015342	rbm5	100	54.902	Mola_mola
ENSODEG00000019111	-	99	49.204	ENSMMOG00000021804	-	99	49.694	Mola_mola
ENSODEG00000019111	-	100	87.760	ENSMODG00000012301	RBM5	100	87.760	Monodelphis_domestica
ENSODEG00000019111	-	100	56.588	ENSMALG00000016769	-	100	56.071	Monopterus_albus
ENSODEG00000019111	-	99	58.394	ENSMALG00000000609	rbm5	99	57.509	Monopterus_albus
ENSODEG00000019111	-	100	89.693	MGP_CAROLIEiJ_G0032660	Rbm5	100	90.438	Mus_caroli
ENSODEG00000019111	-	100	89.816	ENSMUSG00000032580	Rbm5	100	90.552	Mus_musculus
ENSODEG00000019111	-	100	90.061	MGP_PahariEiJ_G0015528	Rbm5	100	90.837	Mus_pahari
ENSODEG00000019111	-	100	89.939	MGP_SPRETEiJ_G0033805	Rbm5	100	90.837	Mus_spretus
ENSODEG00000019111	-	100	90.675	ENSMLUG00000007875	RBM5	100	90.675	Myotis_lucifugus
ENSODEG00000019111	-	100	91.043	ENSNGAG00000011777	Rbm5	100	91.043	Nannospalax_galili
ENSODEG00000019111	-	96	55.970	ENSNBRG00000004400	RBM5	95	56.041	Neolamprologus_brichardi
ENSODEG00000019111	-	100	59.013	ENSNBRG00000018097	rbm5	100	59.444	Neolamprologus_brichardi
ENSODEG00000019111	-	100	91.288	ENSNLEG00000006943	RBM5	100	91.288	Nomascus_leucogenys
ENSODEG00000019111	-	99	81.874	ENSMEUG00000012994	RBM5	100	81.998	Notamacropus_eugenii
ENSODEG00000019111	-	92	87.299	ENSOPRG00000015154	RBM5	93	87.268	Ochotona_princeps
ENSODEG00000019111	-	100	59.242	ENSONIG00000004107	rbm5	100	59.791	Oreochromis_niloticus
ENSODEG00000019111	-	100	56.429	ENSONIG00000019007	RBM5	100	56.295	Oreochromis_niloticus
ENSODEG00000019111	-	88	88.375	ENSOANG00000006557	RBM5	100	88.375	Ornithorhynchus_anatinus
ENSODEG00000019111	-	100	90.184	ENSOCUG00000011652	RBM5	100	90.184	Oryctolagus_cuniculus
ENSODEG00000019111	-	100	52.824	ENSORLG00000001053	-	100	52.432	Oryzias_latipes
ENSODEG00000019111	-	95	58.537	ENSORLG00000003369	rbm5	99	57.125	Oryzias_latipes
ENSODEG00000019111	-	100	58.016	ENSORLG00020021744	rbm5	100	57.724	Oryzias_latipes_hni
ENSODEG00000019111	-	95	51.415	ENSORLG00020006782	-	98	51.241	Oryzias_latipes_hni
ENSODEG00000019111	-	91	69.767	ENSORLG00015018379	rbm5	99	69.767	Oryzias_latipes_hsok
ENSODEG00000019111	-	95	52.736	ENSORLG00015002854	-	98	51.617	Oryzias_latipes_hsok
ENSODEG00000019111	-	100	58.939	ENSOMEG00000002219	rbm5	100	57.604	Oryzias_melastigma
ENSODEG00000019111	-	81	49.401	ENSOMEG00000010653	-	89	61.538	Oryzias_melastigma
ENSODEG00000019111	-	93	87.550	ENSOGAG00000004205	RBM5	100	87.550	Otolemur_garnettii
ENSODEG00000019111	-	100	91.166	ENSOARG00000010923	RBM5	100	91.166	Ovis_aries
ENSODEG00000019111	-	100	91.411	ENSPPAG00000043010	RBM5	100	91.411	Pan_paniscus
ENSODEG00000019111	-	100	91.411	ENSPPRG00000005404	RBM5	100	91.411	Panthera_pardus
ENSODEG00000019111	-	100	91.411	ENSPTIG00000000962	RBM5	100	91.411	Panthera_tigris_altaica
ENSODEG00000019111	-	100	91.411	ENSPTRG00000014946	RBM5	100	91.411	Pan_troglodytes
ENSODEG00000019111	-	100	91.411	ENSPANG00000018507	RBM5	100	91.411	Papio_anubis
ENSODEG00000019111	-	77	57.143	ENSPKIG00000019187	-	100	57.778	Paramormyrops_kingsleyae
ENSODEG00000019111	-	100	59.701	ENSPKIG00000024837	RBM5	100	59.217	Paramormyrops_kingsleyae
ENSODEG00000019111	-	88	83.077	ENSPSIG00000016073	RBM5	100	83.077	Pelodiscus_sinensis
ENSODEG00000019111	-	79	51.988	ENSPMGG00000017347	rbm5	100	53.752	Periophthalmus_magnuspinnatus
ENSODEG00000019111	-	79	69.231	ENSPMGG00000004719	-	99	69.048	Periophthalmus_magnuspinnatus
ENSODEG00000019111	-	99	43.103	ENSPMAG00000001998	rbm5	91	44.090	Petromyzon_marinus
ENSODEG00000019111	-	100	87.760	ENSPCIG00000021531	RBM5	100	87.882	Phascolarctos_cinereus
ENSODEG00000019111	-	100	58.992	ENSPLAG00000006318	rbm5	100	59.629	Poecilia_latipinna
ENSODEG00000019111	-	73	59.068	ENSPMEG00000008651	rbm5	98	60.399	Poecilia_mexicana
ENSODEG00000019111	-	100	59.540	ENSPMEG00000004295	rbm5	100	59.953	Poecilia_mexicana
ENSODEG00000019111	-	100	58.716	ENSPREG00000003795	rbm5	100	59.096	Poecilia_reticulata
ENSODEG00000019111	-	72	80.068	ENSPCAG00000005459	RBM5	86	80.068	Procavia_capensis
ENSODEG00000019111	-	100	91.288	ENSPCOG00000025840	RBM5	100	91.288	Propithecus_coquereli
ENSODEG00000019111	-	100	88.589	ENSPVAG00000006812	RBM5	100	88.589	Pteropus_vampyrus
ENSODEG00000019111	-	100	59.013	ENSPNYG00000014787	rbm5	100	59.444	Pundamilia_nyererei
ENSODEG00000019111	-	84	56.111	ENSPNYG00000006361	RBM5	100	55.932	Pundamilia_nyererei
ENSODEG00000019111	-	100	61.844	ENSPNAG00000012070	rbm5	100	62.280	Pygocentrus_nattereri
ENSODEG00000019111	-	100	90.184	ENSRNOG00000018153	Rbm5	100	90.920	Rattus_norvegicus
ENSODEG00000019111	-	100	91.411	ENSRBIG00000012679	RBM5	100	91.411	Rhinopithecus_bieti
ENSODEG00000019111	-	100	91.411	ENSRROG00000041331	RBM5	100	91.411	Rhinopithecus_roxellana
ENSODEG00000019111	-	100	91.411	ENSSBOG00000006324	RBM5	100	91.411	Saimiri_boliviensis_boliviensis
ENSODEG00000019111	-	100	88.098	ENSSHAG00000018260	RBM5	100	88.098	Sarcophilus_harrisii
ENSODEG00000019111	-	100	62.061	ENSSFOG00015019645	-	100	63.232	Scleropages_formosus
ENSODEG00000019111	-	100	62.850	ENSSFOG00015019052	rbm5	94	62.324	Scleropages_formosus
ENSODEG00000019111	-	100	59.117	ENSSMAG00000017106	rbm5	100	58.713	Scophthalmus_maximus
ENSODEG00000019111	-	100	59.907	ENSSDUG00000019775	rbm5	100	60.839	Seriola_dumerili
ENSODEG00000019111	-	100	58.099	ENSSLDG00000015996	-	100	57.814	Seriola_lalandi_dorsalis
ENSODEG00000019111	-	100	59.560	ENSSLDG00000002329	rbm5	100	60.373	Seriola_lalandi_dorsalis
ENSODEG00000019111	-	63	88.158	ENSSARG00000009724	-	67	88.158	Sorex_araneus
ENSODEG00000019111	-	100	72.328	ENSSPUG00000001876	RBM5	85	80.053	Sphenodon_punctatus
ENSODEG00000019111	-	100	58.747	ENSSPAG00000020011	-	100	58.107	Stegastes_partitus
ENSODEG00000019111	-	100	59.096	ENSSPAG00000019638	rbm5	100	59.766	Stegastes_partitus
ENSODEG00000019111	-	100	91.166	ENSSSCG00000011395	RBM5	100	91.166	Sus_scrofa
ENSODEG00000019111	-	93	74.274	ENSTGUG00000006417	RBM5	98	76.153	Taeniopygia_guttata
ENSODEG00000019111	-	100	59.133	ENSTRUG00000008292	rbm5	100	59.342	Takifugu_rubripes
ENSODEG00000019111	-	99	42.985	ENSTNIG00000014742	rbm5	77	60.662	Tetraodon_nigroviridis
ENSODEG00000019111	-	100	83.681	ENSTBEG00000005424	RBM5	100	83.681	Tupaia_belangeri
ENSODEG00000019111	-	100	83.926	ENSTTRG00000007717	RBM5	100	85.521	Tursiops_truncatus
ENSODEG00000019111	-	100	91.411	ENSUAMG00000028347	RBM5	100	91.411	Ursus_americanus
ENSODEG00000019111	-	100	91.411	ENSUMAG00000022027	RBM5	100	91.411	Ursus_maritimus
ENSODEG00000019111	-	90	90.587	ENSVPAG00000009388	RBM5	100	90.587	Vicugna_pacos
ENSODEG00000019111	-	100	91.534	ENSVVUG00000028647	RBM5	100	91.534	Vulpes_vulpes
ENSODEG00000019111	-	100	58.945	ENSXMAG00000016369	rbm5	100	59.328	Xiphophorus_maculatus