EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019119 (Gene tree)
Gene ID: 101573010
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 19 kDa protein-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 435 bases
Position: chrJH651673.1:3472439-3472873
Accession: 101573010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025800	SRP19	PF01922.17	7.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026184	-	435	XM_004642646	ENSODEP00000025800	144 (aa)	XP_004642703	UPI0003340419

Gene Model

Click here to download ENSODEG00000019119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019119	-	91	77.099	ENSODEG00000013862	-	91	77.099
ENSODEG00000019119	-	67	93.814	ENSODEG00000005538	-	82	94.624
ENSODEG00000019119	-	94	78.519	ENSODEG00000003165	-	89	78.626
ENSODEG00000019119	-	94	78.519	ENSODEG00000005033	-	89	78.626
ENSODEG00000019119	-	85	72.951	ENSODEG00000000221	-	85	72.881
ENSODEG00000019119	-	94	77.037	ENSODEG00000016828	-	89	77.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019119	-	94	89.630	ENSG00000153037	SRP19	99	92.000	Homo_sapiens
ENSODEG00000019119	-	90	64.341	ENSAPOG00000002199	srp19	88	64.286	Acanthochromis_polyacanthus
ENSODEG00000019119	-	94	88.889	ENSAMEG00000012623	SRP19	90	89.313	Ailuropoda_melanoleuca
ENSODEG00000019119	-	90	62.791	ENSACIG00000005082	srp19	87	63.200	Amphilophus_citrinellus
ENSODEG00000019119	-	90	63.566	ENSAOCG00000002718	srp19	89	63.492	Amphiprion_ocellaris
ENSODEG00000019119	-	90	63.566	ENSAPEG00000022170	srp19	89	63.492	Amphiprion_percula
ENSODEG00000019119	-	90	65.891	ENSATEG00000012472	srp19	89	65.873	Anabas_testudineus
ENSODEG00000019119	-	78	79.646	ENSAPLG00000002624	SRP19	90	80.180	Anas_platyrhynchos
ENSODEG00000019119	-	92	74.436	ENSACAG00000007550	SRP19	90	74.809	Anolis_carolinensis
ENSODEG00000019119	-	78	79.646	ENSANAG00000029862	-	85	82.796	Aotus_nancymaae
ENSODEG00000019119	-	94	91.111	ENSANAG00000032576	-	96	87.736	Aotus_nancymaae
ENSODEG00000019119	-	95	70.073	ENSANAG00000030287	-	96	70.229	Aotus_nancymaae
ENSODEG00000019119	-	90	61.240	ENSACLG00000006259	srp19	88	61.600	Astatotilapia_calliptera
ENSODEG00000019119	-	89	64.062	ENSAMXG00000043011	srp19	88	64.800	Astyanax_mexicanus
ENSODEG00000019119	-	94	88.889	ENSBTAG00000012803	SRP19	91	89.313	Bos_taurus
ENSODEG00000019119	-	82	46.610	WBGene00018159	F37F2.2	82	46.610	Caenorhabditis_elegans
ENSODEG00000019119	-	94	89.630	ENSCJAG00000038676	-	96	85.849	Callithrix_jacchus
ENSODEG00000019119	-	91	69.466	ENSCJAG00000045531	-	83	69.466	Callithrix_jacchus
ENSODEG00000019119	-	94	89.630	ENSCAFG00000031549	SRP19	91	90.076	Canis_familiaris
ENSODEG00000019119	-	83	90.833	ENSCAFG00020022437	-	90	90.833	Canis_lupus_dingo
ENSODEG00000019119	-	64	84.783	ENSCAFG00020004285	-	82	84.783	Canis_lupus_dingo
ENSODEG00000019119	-	94	89.630	ENSCAFG00020014267	-	91	90.076	Canis_lupus_dingo
ENSODEG00000019119	-	94	88.889	ENSCHIG00000017551	SRP19	91	89.313	Capra_hircus
ENSODEG00000019119	-	94	90.370	ENSTSYG00000007875	SRP19	91	90.840	Carlito_syrichta
ENSODEG00000019119	-	99	74.126	ENSCPOG00000036806	SRP19	80	90.566	Cavia_porcellus
ENSODEG00000019119	-	92	71.429	ENSCCAG00000023426	-	86	71.212	Cebus_capucinus
ENSODEG00000019119	-	92	68.939	ENSCCAG00000029821	-	66	68.702	Cebus_capucinus
ENSODEG00000019119	-	94	91.111	ENSCCAG00000035651	-	91	91.603	Cebus_capucinus
ENSODEG00000019119	-	94	82.222	ENSCATG00000039250	-	91	82.443	Cercocebus_atys
ENSODEG00000019119	-	88	77.953	ENSCATG00000040513	-	79	77.344	Cercocebus_atys
ENSODEG00000019119	-	94	92.593	ENSCLAG00000004791	-	91	93.130	Chinchilla_lanigera
ENSODEG00000019119	-	94	86.667	ENSCLAG00000016055	-	91	87.023	Chinchilla_lanigera
ENSODEG00000019119	-	94	89.630	ENSCHOG00000013452	SRP19	91	90.076	Choloepus_hoffmanni
ENSODEG00000019119	-	90	76.744	ENSCPBG00000013903	SRP19	88	77.778	Chrysemys_picta_bellii
ENSODEG00000019119	-	94	88.889	ENSCGRG00001020510	Srp19	91	89.313	Cricetulus_griseus_chok1gshd
ENSODEG00000019119	-	67	83.168	ENSCGRG00000010716	-	85	83.505	Cricetulus_griseus_crigri
ENSODEG00000019119	-	83	80.000	ENSCGRG00000008542	-	89	80.172	Cricetulus_griseus_crigri
ENSODEG00000019119	-	89	64.062	ENSCSEG00000010039	srp19	88	64.000	Cynoglossus_semilaevis
ENSODEG00000019119	-	88	66.142	ENSCVAG00000017621	srp19	87	66.935	Cyprinodon_variegatus
ENSODEG00000019119	-	88	66.667	ENSDARG00000035699	srp19	87	66.935	Danio_rerio
ENSODEG00000019119	-	94	88.889	ENSDNOG00000013856	SRP19	91	89.313	Dasypus_novemcinctus
ENSODEG00000019119	-	71	83.178	ENSDORG00000004746	Srp19	73	89.247	Dipodomys_ordii
ENSODEG00000019119	-	81	49.138	FBgn0015298	Srp19	70	50.442	Drosophila_melanogaster
ENSODEG00000019119	-	94	84.444	ENSETEG00000017132	SRP19	91	84.733	Echinops_telfairi
ENSODEG00000019119	-	81	62.931	ENSEBUG00000006613	srp19	82	62.931	Eptatretus_burgeri
ENSODEG00000019119	-	94	88.148	ENSEASG00005015182	SRP19	91	88.550	Equus_asinus_asinus
ENSODEG00000019119	-	94	89.630	ENSEEUG00000007298	SRP19	91	90.076	Erinaceus_europaeus
ENSODEG00000019119	-	89	66.406	ENSELUG00000007958	srp19	89	66.667	Esox_lucius
ENSODEG00000019119	-	90	62.791	ENSELUG00000004594	srp19	87	63.710	Esox_lucius
ENSODEG00000019119	-	94	90.370	ENSFCAG00000025895	SRP19	91	92.000	Felis_catus
ENSODEG00000019119	-	94	91.852	ENSFDAG00000013543	SRP19	91	92.366	Fukomys_damarensis
ENSODEG00000019119	-	78	66.071	ENSFHEG00000000493	srp19	87	65.323	Fundulus_heteroclitus
ENSODEG00000019119	-	83	69.167	ENSGMOG00000003264	srp19	91	70.085	Gadus_morhua
ENSODEG00000019119	-	92	78.947	ENSGALG00000000218	SRP19	91	79.389	Gallus_gallus
ENSODEG00000019119	-	84	67.769	ENSGAFG00000015815	srp19	58	66.116	Gambusia_affinis
ENSODEG00000019119	-	88	65.354	ENSGACG00000001093	srp19	83	65.323	Gasterosteus_aculeatus
ENSODEG00000019119	-	92	77.444	ENSGAGG00000025305	SRP19	90	78.462	Gopherus_agassizii
ENSODEG00000019119	-	90	63.846	ENSHBUG00000006131	srp19	88	63.780	Haplochromis_burtoni
ENSODEG00000019119	-	94	92.593	ENSHGLG00000006075	SRP19	91	93.130	Heterocephalus_glaber_female
ENSODEG00000019119	-	94	92.593	ENSHGLG00100015859	SRP19	91	93.130	Heterocephalus_glaber_male
ENSODEG00000019119	-	89	62.500	ENSHCOG00000013231	srp19	88	63.200	Hippocampus_comes
ENSODEG00000019119	-	88	66.667	ENSIPUG00000025084	srp19	87	66.935	Ictalurus_punctatus
ENSODEG00000019119	-	94	89.630	ENSSTOG00000000348	SRP19	91	90.076	Ictidomys_tridecemlineatus
ENSODEG00000019119	-	94	88.889	ENSJJAG00000017185	Srp19	91	89.313	Jaculus_jaculus
ENSODEG00000019119	-	91	64.885	ENSKMAG00000011155	srp19	87	66.935	Kryptolebias_marmoratus
ENSODEG00000019119	-	88	65.354	ENSLBEG00000026727	srp19	87	65.323	Labrus_bergylta
ENSODEG00000019119	-	88	76.190	ENSLACG00000004459	SRP19	81	76.613	Latimeria_chalumnae
ENSODEG00000019119	-	89	70.312	ENSLOCG00000010302	srp19	89	70.635	Lepisosteus_oculatus
ENSODEG00000019119	-	94	88.889	ENSLAFG00000002564	SRP19	91	89.313	Loxodonta_africana
ENSODEG00000019119	-	88	84.127	ENSMFAG00000000554	-	90	84.127	Macaca_fascicularis
ENSODEG00000019119	-	83	69.748	ENSMFAG00000040055	-	88	69.748	Macaca_fascicularis
ENSODEG00000019119	-	85	77.236	ENSMMUG00000032515	-	90	77.236	Macaca_mulatta
ENSODEG00000019119	-	88	84.127	ENSMMUG00000049186	-	90	84.127	Macaca_mulatta
ENSODEG00000019119	-	83	68.908	ENSMNEG00000040117	-	88	68.908	Macaca_nemestrina
ENSODEG00000019119	-	94	88.889	ENSMNEG00000038714	SRP19	96	87.736	Macaca_nemestrina
ENSODEG00000019119	-	90	65.116	ENSMAMG00000018346	srp19	88	65.079	Mastacembelus_armatus
ENSODEG00000019119	-	90	63.846	ENSMZEG00005001765	srp19	88	63.780	Maylandia_zebra
ENSODEG00000019119	-	83	80.000	ENSMGAG00000006762	SRP19	90	80.508	Meleagris_gallopavo
ENSODEG00000019119	-	94	88.148	ENSMICG00000000399	SRP19	96	85.849	Microcebus_murinus
ENSODEG00000019119	-	67	80.412	ENSMICG00000049202	-	87	80.412	Microcebus_murinus
ENSODEG00000019119	-	67	87.629	ENSMOCG00000010532	-	85	88.172	Microtus_ochrogaster
ENSODEG00000019119	-	94	89.630	ENSMOCG00000006534	Srp19	91	90.076	Microtus_ochrogaster
ENSODEG00000019119	-	92	65.152	ENSMMOG00000010417	srp19	84	64.615	Mola_mola
ENSODEG00000019119	-	90	85.271	ENSMODG00000013278	SRP19	89	85.827	Monodelphis_domestica
ENSODEG00000019119	-	88	67.717	ENSMALG00000003858	srp19	87	67.742	Monopterus_albus
ENSODEG00000019119	-	94	88.889	MGP_CAROLIEiJ_G0022086	Srp19	98	94.872	Mus_caroli
ENSODEG00000019119	-	94	88.889	ENSMUSG00000014504	Srp19	98	94.872	Mus_musculus
ENSODEG00000019119	-	94	88.889	MGP_PahariEiJ_G0018820	Srp19	98	92.308	Mus_pahari
ENSODEG00000019119	-	94	88.889	MGP_SPRETEiJ_G0022998	Srp19	98	94.872	Mus_spretus
ENSODEG00000019119	-	94	89.630	ENSMPUG00000012695	SRP19	90	90.076	Mustela_putorius_furo
ENSODEG00000019119	-	94	89.630	ENSMLUG00000014793	-	91	90.076	Myotis_lucifugus
ENSODEG00000019119	-	83	87.500	ENSMLUG00000024549	-	86	87.500	Myotis_lucifugus
ENSODEG00000019119	-	90	80.769	ENSNGAG00000014524	-	100	80.769	Nannospalax_galili
ENSODEG00000019119	-	94	88.889	ENSNGAG00000003440	-	91	89.313	Nannospalax_galili
ENSODEG00000019119	-	94	78.519	ENSNLEG00000035364	-	91	78.626	Nomascus_leucogenys
ENSODEG00000019119	-	83	89.076	ENSMEUG00000012529	SRP19	90	89.744	Notamacropus_eugenii
ENSODEG00000019119	-	81	89.744	ENSOPRG00000010549	SRP19	90	89.744	Ochotona_princeps
ENSODEG00000019119	-	90	61.240	ENSONIG00000000542	srp19	88	61.600	Oreochromis_niloticus
ENSODEG00000019119	-	87	80.000	ENSOANG00000011139	SRP19	71	80.488	Ornithorhynchus_anatinus
ENSODEG00000019119	-	94	86.765	ENSOCUG00000015639	SRP19	91	87.121	Oryctolagus_cuniculus
ENSODEG00000019119	-	90	65.891	ENSORLG00000028267	srp19	89	65.873	Oryzias_latipes
ENSODEG00000019119	-	90	65.891	ENSORLG00020015201	srp19	89	65.873	Oryzias_latipes_hni
ENSODEG00000019119	-	90	65.891	ENSORLG00015007525	srp19	89	65.873	Oryzias_latipes_hsok
ENSODEG00000019119	-	90	66.667	ENSOMEG00000009178	srp19	89	66.667	Oryzias_melastigma
ENSODEG00000019119	-	94	89.630	ENSOGAG00000008579	SRP19	91	90.076	Otolemur_garnettii
ENSODEG00000019119	-	94	88.148	ENSOARG00000016066	SRP19	91	88.550	Ovis_aries
ENSODEG00000019119	-	94	89.630	ENSPPAG00000037062	SRP19	91	90.076	Pan_paniscus
ENSODEG00000019119	-	94	90.370	ENSPPRG00000015591	SRP19	91	92.000	Panthera_pardus
ENSODEG00000019119	-	94	90.370	ENSPTIG00000021474	SRP19	91	92.000	Panthera_tigris_altaica
ENSODEG00000019119	-	94	89.630	ENSPTRG00000017136	SRP19	91	90.076	Pan_troglodytes
ENSODEG00000019119	-	94	88.889	ENSPANG00000004370	-	96	87.736	Papio_anubis
ENSODEG00000019119	-	94	81.481	ENSPANG00000034740	-	91	81.679	Papio_anubis
ENSODEG00000019119	-	90	66.667	ENSPKIG00000018671	srp19	89	66.667	Paramormyrops_kingsleyae
ENSODEG00000019119	-	83	80.000	ENSPSIG00000013811	SRP19	89	81.197	Pelodiscus_sinensis
ENSODEG00000019119	-	90	65.116	ENSPMGG00000015313	srp19	88	65.600	Periophthalmus_magnuspinnatus
ENSODEG00000019119	-	94	86.667	ENSPEMG00000004412	-	91	87.023	Peromyscus_maniculatus_bairdii
ENSODEG00000019119	-	90	61.538	ENSPMAG00000002685	srp19	87	62.903	Petromyzon_marinus
ENSODEG00000019119	-	90	86.822	ENSPCIG00000010250	SRP19	88	87.402	Phascolarctos_cinereus
ENSODEG00000019119	-	88	66.142	ENSPFOG00000015887	srp19	87	66.129	Poecilia_formosa
ENSODEG00000019119	-	88	66.142	ENSPLAG00000007784	srp19	87	66.129	Poecilia_latipinna
ENSODEG00000019119	-	88	65.354	ENSPMEG00000003056	srp19	87	65.323	Poecilia_mexicana
ENSODEG00000019119	-	88	66.142	ENSPREG00000017307	srp19	87	66.129	Poecilia_reticulata
ENSODEG00000019119	-	94	89.630	ENSPPYG00000029584	SRP19	90	90.076	Pongo_abelii
ENSODEG00000019119	-	94	70.370	ENSPCAG00000000228	SRP19	91	70.229	Procavia_capensis
ENSODEG00000019119	-	94	89.630	ENSPCOG00000023239	SRP19	96	87.736	Propithecus_coquereli
ENSODEG00000019119	-	94	88.889	ENSPVAG00000004895	SRP19	91	89.313	Pteropus_vampyrus
ENSODEG00000019119	-	88	63.492	ENSPNAG00000009392	srp19	85	65.812	Pygocentrus_nattereri
ENSODEG00000019119	-	94	88.889	ENSRNOG00000020204	Srp19	91	89.313	Rattus_norvegicus
ENSODEG00000019119	-	94	88.889	ENSRBIG00000015627	-	96	87.736	Rhinopithecus_bieti
ENSODEG00000019119	-	52	84.000	ENSRBIG00000031651	-	83	84.000	Rhinopithecus_bieti
ENSODEG00000019119	-	92	80.451	ENSRBIG00000040440	-	90	80.916	Rhinopithecus_bieti
ENSODEG00000019119	-	86	72.581	ENSRROG00000037316	-	89	73.109	Rhinopithecus_roxellana
ENSODEG00000019119	-	92	80.451	ENSRROG00000037054	-	91	80.916	Rhinopithecus_roxellana
ENSODEG00000019119	-	94	91.111	ENSSBOG00000028071	-	91	92.000	Saimiri_boliviensis_boliviensis
ENSODEG00000019119	-	94	65.185	ENSSBOG00000032685	-	85	72.632	Saimiri_boliviensis_boliviensis
ENSODEG00000019119	-	90	67.442	ENSSFOG00015022139	srp19	89	67.460	Scleropages_formosus
ENSODEG00000019119	-	90	61.240	ENSSMAG00000016803	srp19	88	61.111	Scophthalmus_maximus
ENSODEG00000019119	-	90	57.857	ENSSDUG00000012930	srp19	89	57.664	Seriola_dumerili
ENSODEG00000019119	-	60	51.163	ENSSLDG00000021916	-	55	51.163	Seriola_lalandi_dorsalis
ENSODEG00000019119	-	94	87.407	ENSSARG00000000615	SRP19	91	87.786	Sorex_araneus
ENSODEG00000019119	-	85	82.114	ENSSPUG00000015769	SRP19	88	82.031	Sphenodon_punctatus
ENSODEG00000019119	-	94	89.630	ENSSSCG00000026230	SRP19	91	90.076	Sus_scrofa
ENSODEG00000019119	-	85	79.675	ENSTGUG00000001019	SRP19	89	78.462	Taeniopygia_guttata
ENSODEG00000019119	-	88	68.462	ENSTRUG00000023119	srp19	88	68.504	Takifugu_rubripes
ENSODEG00000019119	-	90	65.116	ENSTNIG00000018880	srp19	89	65.079	Tetraodon_nigroviridis
ENSODEG00000019119	-	94	88.148	ENSTTRG00000001690	SRP19	91	88.550	Tursiops_truncatus
ENSODEG00000019119	-	91	90.076	ENSUAMG00000000111	SRP19	91	90.076	Ursus_americanus
ENSODEG00000019119	-	94	89.630	ENSUMAG00000016997	SRP19	91	90.076	Ursus_maritimus
ENSODEG00000019119	-	94	88.889	ENSVPAG00000006001	SRP19	91	89.313	Vicugna_pacos
ENSODEG00000019119	-	67	87.629	ENSVVUG00000012423	SRP19	83	92.308	Vulpes_vulpes
ENSODEG00000019119	-	84	69.421	ENSXETG00000011993	srp19	83	69.492	Xenopus_tropicalis
ENSODEG00000019119	-	66	64.211	ENSXCOG00000012530	srp19	68	64.211	Xiphophorus_couchianus
ENSODEG00000019119	-	92	64.394	ENSXMAG00000029788	srp19	87	66.129	Xiphophorus_maculatus