EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019143 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 429 bases
Position: chrJH651630.1:1690096-1690524
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025820	RRM_1	PF00076.22	1.5e-29	1	2
ENSODEP00000025820	RRM_1	PF00076.22	1.5e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026208	-	429	-	ENSODEP00000025820	142 (aa)	-	-

Gene Model

Click here to download ENSODEG00000019143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019143	-	100	95.105	ENSODEG00000020039	-	100	95.105
ENSODEG00000019143	-	100	75.524	ENSODEG00000006635	-	100	75.524
ENSODEG00000019143	-	98	30.000	ENSODEG00000009409	TIA1	69	30.000
ENSODEG00000019143	-	100	96.503	ENSODEG00000017717	RBM14	100	96.503
ENSODEG00000019143	-	58	32.143	ENSODEG00000016510	-	62	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019143	-	98	94.286	ENSG00000173914	RBM4B	97	95.652	Homo_sapiens
ENSODEG00000019143	-	99	41.071	ENSG00000248643	RBM14-RBM4	95	41.071	Homo_sapiens
ENSODEG00000019143	-	100	95.804	ENSG00000173933	RBM4	100	95.804	Homo_sapiens
ENSODEG00000019143	-	100	93.007	ENSANAG00000033986	-	87	93.007	Aotus_nancymaae
ENSODEG00000019143	-	100	92.308	ENSANAG00000023478	RBM4B	97	95.652	Aotus_nancymaae
ENSODEG00000019143	-	98	94.286	ENSBTAG00000000423	RBM4B	63	94.286	Bos_taurus
ENSODEG00000019143	-	96	95.652	ENSCJAG00000013666	RBM4B	97	95.652	Callithrix_jacchus
ENSODEG00000019143	-	98	94.286	ENSCAFG00020015519	RBM4B	78	94.286	Canis_lupus_dingo
ENSODEG00000019143	-	94	83.178	ENSTSYG00000036168	-	86	83.178	Carlito_syrichta
ENSODEG00000019143	-	100	96.503	ENSCAPG00000016600	RBM4	100	96.503	Cavia_aperea
ENSODEG00000019143	-	100	96.503	ENSCPOG00000013194	RBM4	100	96.503	Cavia_porcellus
ENSODEG00000019143	-	99	72.340	ENSCCAG00000023319	-	68	72.340	Cebus_capucinus
ENSODEG00000019143	-	100	93.007	ENSCCAG00000007508	-	100	93.007	Cebus_capucinus
ENSODEG00000019143	-	99	92.958	ENSCCAG00000016501	RBM4B	97	95.652	Cebus_capucinus
ENSODEG00000019143	-	98	94.286	ENSCATG00000035353	RBM4B	97	95.652	Cercocebus_atys
ENSODEG00000019143	-	100	96.503	ENSCLAG00000014756	RBM4	100	96.503	Chinchilla_lanigera
ENSODEG00000019143	-	100	90.909	ENSCPBG00000023800	-	77	90.909	Chrysemys_picta_bellii
ENSODEG00000019143	-	98	94.286	ENSCANG00000021868	RBM4B	97	95.652	Colobus_angolensis_palliatus
ENSODEG00000019143	-	100	95.804	ENSCGRG00001016609	-	100	95.804	Cricetulus_griseus_chok1gshd
ENSODEG00000019143	-	100	95.804	ENSCGRG00000010183	-	100	95.804	Cricetulus_griseus_crigri
ENSODEG00000019143	-	100	95.105	ENSDORG00000004538	-	100	95.105	Dipodomys_ordii
ENSODEG00000019143	-	100	95.804	ENSFCAG00000029651	RBM4	100	95.804	Felis_catus
ENSODEG00000019143	-	99	92.958	ENSFCAG00000007394	RBM4B	97	95.652	Felis_catus
ENSODEG00000019143	-	100	96.503	ENSFDAG00000005447	RBM4	100	96.503	Fukomys_damarensis
ENSODEG00000019143	-	99	89.313	ENSFDAG00000013661	-	96	89.313	Fukomys_damarensis
ENSODEG00000019143	-	96	94.203	ENSGALG00000040489	-	84	94.203	Gallus_gallus
ENSODEG00000019143	-	98	75.714	ENSGGOG00000043023	-	98	76.087	Gorilla_gorilla
ENSODEG00000019143	-	100	93.007	ENSGGOG00000011698	RBM4B	97	95.652	Gorilla_gorilla
ENSODEG00000019143	-	100	95.804	ENSHGLG00000009991	RBM4	100	95.804	Heterocephalus_glaber_female
ENSODEG00000019143	-	100	95.804	ENSHGLG00100003854	RBM4	100	95.804	Heterocephalus_glaber_male
ENSODEG00000019143	-	100	95.804	ENSSTOG00000022811	RBM4	100	95.804	Ictidomys_tridecemlineatus
ENSODEG00000019143	-	93	73.684	ENSJJAG00000003168	-	88	74.419	Jaculus_jaculus
ENSODEG00000019143	-	100	93.706	ENSMFAG00000033927	RBM4B	99	93.706	Macaca_fascicularis
ENSODEG00000019143	-	98	94.286	ENSMNEG00000043371	RBM4B	97	95.652	Macaca_nemestrina
ENSODEG00000019143	-	100	93.706	ENSMLEG00000028563	RBM4B	99	93.706	Mandrillus_leucophaeus
ENSODEG00000019143	-	99	95.035	ENSMICG00000003820	RBM4B	97	95.652	Microcebus_murinus
ENSODEG00000019143	-	100	93.706	ENSMICG00000047975	-	99	93.706	Microcebus_murinus
ENSODEG00000019143	-	100	91.608	ENSMICG00000003817	-	100	91.608	Microcebus_murinus
ENSODEG00000019143	-	100	95.804	MGP_CAROLIEiJ_G0022516	-	100	95.804	Mus_caroli
ENSODEG00000019143	-	99	41.071	MGP_CAROLIEiJ_G0022514	-	95	41.071	Mus_caroli
ENSODEG00000019143	-	100	93.007	ENSMUSG00000033760	Rbm4b	94	93.007	Mus_musculus
ENSODEG00000019143	-	97	95.652	ENSMUSG00000096370	Gm21992	53	95.652	Mus_musculus
ENSODEG00000019143	-	100	95.804	ENSMUSG00000094936	Rbm4	100	95.804	Mus_musculus
ENSODEG00000019143	-	96	95.652	MGP_PahariEiJ_G0014011	-	95	41.071	Mus_pahari
ENSODEG00000019143	-	100	95.804	MGP_PahariEiJ_G0014013	-	100	95.804	Mus_pahari
ENSODEG00000019143	-	99	41.071	MGP_SPRETEiJ_G0023428	-	95	41.071	Mus_spretus
ENSODEG00000019143	-	100	95.804	ENSNLEG00000035021	RBM4	100	95.804	Nomascus_leucogenys
ENSODEG00000019143	-	100	93.007	ENSNLEG00000006213	RBM4B	97	95.652	Nomascus_leucogenys
ENSODEG00000019143	-	100	93.007	ENSPPAG00000015125	RBM4B	97	95.652	Pan_paniscus
ENSODEG00000019143	-	100	95.804	ENSPPRG00000003533	RBM4	100	95.804	Panthera_pardus
ENSODEG00000019143	-	99	92.958	ENSPPRG00000003388	RBM4B	97	95.652	Panthera_pardus
ENSODEG00000019143	-	99	92.958	ENSPTIG00000015426	RBM4B	97	95.652	Panthera_tigris_altaica
ENSODEG00000019143	-	100	96.503	ENSPTIG00000016180	RBM4	100	96.503	Panthera_tigris_altaica
ENSODEG00000019143	-	100	93.007	ENSPTRG00000003935	RBM4B	97	95.652	Pan_troglodytes
ENSODEG00000019143	-	98	94.286	ENSPANG00000020672	RBM4B	97	95.652	Papio_anubis
ENSODEG00000019143	-	99	93.617	ENSPCOG00000027885	RBM4B	97	95.652	Propithecus_coquereli
ENSODEG00000019143	-	100	95.804	ENSRNOG00000050741	Rbm4	100	95.804	Rattus_norvegicus
ENSODEG00000019143	-	98	94.286	ENSRBIG00000019394	RBM4B	97	95.652	Rhinopithecus_bieti
ENSODEG00000019143	-	100	92.308	ENSRROG00000032796	-	87	95.652	Rhinopithecus_roxellana
ENSODEG00000019143	-	98	94.286	ENSRROG00000032850	RBM4B	97	95.652	Rhinopithecus_roxellana
ENSODEG00000019143	-	98	93.571	ENSSBOG00000034474	RBM4B	97	94.928	Saimiri_boliviensis_boliviensis
ENSODEG00000019143	-	100	95.804	ENSUAMG00000014882	RBM4	100	95.804	Ursus_americanus
ENSODEG00000019143	-	100	95.105	ENSUMAG00000011738	-	100	95.105	Ursus_maritimus
ENSODEG00000019143	-	99	85.816	ENSVVUG00000011717	-	96	85.816	Vulpes_vulpes