EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019152 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1902 bases
Position: chrJH651589.1:7455060-7456961
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025828	NOG1	PF06858.14	5.4e-26	1	1
ENSODEP00000025828	MMR_HSR1	PF01926.23	7.9e-18	1	1
ENSODEP00000025828	NOGCT	PF08155.11	2.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026217	-	1902	-	ENSODEP00000025828	633 (aa)	-	-

Gene Model

Click here to download ENSODEG00000019152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019152's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019152	-	100	97.476	ENSODEG00000000962	-	100	97.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019152	-	100	93.375	ENSG00000107937	GTPBP4	100	97.143	Homo_sapiens
ENSODEG00000019152	-	100	80.442	ENSAPOG00000020433	gtpbp4	100	77.165	Acanthochromis_polyacanthus
ENSODEG00000019152	-	100	92.587	ENSAMEG00000001845	GTPBP4	100	92.587	Ailuropoda_melanoleuca
ENSODEG00000019152	-	100	76.498	ENSACIG00000018629	gtpbp4	100	76.498	Amphilophus_citrinellus
ENSODEG00000019152	-	100	80.599	ENSAOCG00000000427	gtpbp4	93	80.599	Amphiprion_ocellaris
ENSODEG00000019152	-	100	80.757	ENSAPEG00000002544	gtpbp4	100	80.757	Amphiprion_percula
ENSODEG00000019152	-	100	81.546	ENSATEG00000012635	gtpbp4	95	81.546	Anabas_testudineus
ENSODEG00000019152	-	52	80.665	ENSAPLG00000013790	-	100	80.665	Anas_platyrhynchos
ENSODEG00000019152	-	100	83.123	ENSACAG00000002943	GTPBP4	100	83.123	Anolis_carolinensis
ENSODEG00000019152	-	99	81.458	ENSANAG00000022188	-	99	81.300	Aotus_nancymaae
ENSODEG00000019152	-	87	87.283	ENSANAG00000029209	-	100	90.120	Aotus_nancymaae
ENSODEG00000019152	-	71	84.598	ENSACLG00000026330	gtpbp4	92	90.667	Astatotilapia_calliptera
ENSODEG00000019152	-	100	80.284	ENSAMXG00000019771	gtpbp4	100	80.284	Astyanax_mexicanus
ENSODEG00000019152	-	100	92.271	ENSBTAG00000014917	GTPBP4	100	92.271	Bos_taurus
ENSODEG00000019152	-	99	50.946	WBGene00020297	nog-1	99	51.237	Caenorhabditis_elegans
ENSODEG00000019152	-	100	93.396	ENSCJAG00000008494	-	100	93.868	Callithrix_jacchus
ENSODEG00000019152	-	100	92.453	ENSCJAG00000022962	-	100	92.925	Callithrix_jacchus
ENSODEG00000019152	-	93	93.697	ENSCAFG00000005536	GTPBP4	100	93.697	Canis_familiaris
ENSODEG00000019152	-	100	93.691	ENSCAFG00020004307	GTPBP4	100	93.691	Canis_lupus_dingo
ENSODEG00000019152	-	100	92.114	ENSCHIG00000018346	GTPBP4	100	92.114	Capra_hircus
ENSODEG00000019152	-	100	93.375	ENSTSYG00000004977	GTPBP4	100	93.375	Carlito_syrichta
ENSODEG00000019152	-	99	82.919	ENSCAPG00000002134	GTPBP4	99	82.919	Cavia_aperea
ENSODEG00000019152	-	100	95.268	ENSCPOG00000013736	GTPBP4	100	95.268	Cavia_porcellus
ENSODEG00000019152	-	99	92.417	ENSCCAG00000021627	-	92	93.049	Cebus_capucinus
ENSODEG00000019152	-	100	71.136	ENSCCAG00000030115	-	100	71.136	Cebus_capucinus
ENSODEG00000019152	-	100	94.006	ENSCATG00000004303	GTPBP4	100	94.006	Cercocebus_atys
ENSODEG00000019152	-	100	95.741	ENSCLAG00000011323	GTPBP4	100	95.741	Chinchilla_lanigera
ENSODEG00000019152	-	100	94.164	ENSCSAG00000014097	GTPBP4	100	94.164	Chlorocebus_sabaeus
ENSODEG00000019152	-	96	95.148	ENSCHOG00000012602	GTPBP4	88	95.148	Choloepus_hoffmanni
ENSODEG00000019152	-	100	84.858	ENSCPBG00000008398	GTPBP4	100	84.858	Chrysemys_picta_bellii
ENSODEG00000019152	-	100	61.957	ENSCING00000001957	-	100	62.578	Ciona_intestinalis
ENSODEG00000019152	-	100	61.598	ENSCSAVG00000009793	-	99	76.375	Ciona_savignyi
ENSODEG00000019152	-	100	89.639	ENSCANG00000014168	GTPBP4	100	89.639	Colobus_angolensis_palliatus
ENSODEG00000019152	-	100	94.795	ENSCGRG00001013765	Gtpbp4	100	94.795	Cricetulus_griseus_chok1gshd
ENSODEG00000019152	-	100	94.795	ENSCGRG00000012171	Gtpbp4	100	94.795	Cricetulus_griseus_crigri
ENSODEG00000019152	-	100	76.341	ENSCSEG00000007352	gtpbp4	100	76.341	Cynoglossus_semilaevis
ENSODEG00000019152	-	100	79.653	ENSCVAG00000008993	gtpbp4	100	79.653	Cyprinodon_variegatus
ENSODEG00000019152	-	100	80.599	ENSDARG00000018961	gtpbp4	100	80.599	Danio_rerio
ENSODEG00000019152	-	67	92.706	ENSDNOG00000006746	GTPBP4	100	92.706	Dasypus_novemcinctus
ENSODEG00000019152	-	83	98.095	ENSDORG00000010884	Gtpbp4	96	98.095	Dipodomys_ordii
ENSODEG00000019152	-	100	57.599	FBgn0028473	Non1	100	57.599	Drosophila_melanogaster
ENSODEG00000019152	-	74	90.816	ENSETEG00000016840	-	71	90.816	Echinops_telfairi
ENSODEG00000019152	-	98	62.560	ENSEBUG00000010311	gtpbp4	99	62.560	Eptatretus_burgeri
ENSODEG00000019152	-	100	94.795	ENSEASG00005019082	GTPBP4	100	94.795	Equus_asinus_asinus
ENSODEG00000019152	-	100	94.795	ENSECAG00000001700	GTPBP4	100	94.795	Equus_caballus
ENSODEG00000019152	-	100	92.453	ENSEEUG00000009889	GTPBP4	91	92.453	Erinaceus_europaeus
ENSODEG00000019152	-	100	80.031	ENSELUG00000008578	gtpbp4	96	80.579	Esox_lucius
ENSODEG00000019152	-	100	93.533	ENSFCAG00000026213	GTPBP4	100	93.533	Felis_catus
ENSODEG00000019152	-	99	84.469	ENSFALG00000006971	GTPBP4	87	85.647	Ficedula_albicollis
ENSODEG00000019152	-	100	95.741	ENSFDAG00000000998	GTPBP4	100	95.741	Fukomys_damarensis
ENSODEG00000019152	-	100	80.757	ENSFHEG00000012922	gtpbp4	100	80.757	Fundulus_heteroclitus
ENSODEG00000019152	-	100	79.338	ENSGMOG00000016090	gtpbp4	100	79.338	Gadus_morhua
ENSODEG00000019152	-	100	85.489	ENSGALG00000006703	GTPBP4	100	85.489	Gallus_gallus
ENSODEG00000019152	-	100	80.915	ENSGAFG00000002075	gtpbp4	100	80.915	Gambusia_affinis
ENSODEG00000019152	-	100	80.284	ENSGACG00000017481	gtpbp4	100	80.284	Gasterosteus_aculeatus
ENSODEG00000019152	-	93	85.349	ENSGAGG00000018689	GTPBP4	100	85.349	Gopherus_agassizii
ENSODEG00000019152	-	100	93.533	ENSGGOG00000013372	GTPBP4	100	93.533	Gorilla_gorilla
ENSODEG00000019152	-	100	81.073	ENSHBUG00000000192	gtpbp4	100	81.073	Haplochromis_burtoni
ENSODEG00000019152	-	100	94.953	ENSHGLG00000013071	GTPBP4	100	94.953	Heterocephalus_glaber_female
ENSODEG00000019152	-	100	94.953	ENSHGLG00100017850	GTPBP4	100	94.953	Heterocephalus_glaber_male
ENSODEG00000019152	-	100	86.457	ENSHGLG00100002964	-	100	86.457	Heterocephalus_glaber_male
ENSODEG00000019152	-	100	80.945	ENSHCOG00000011543	gtpbp4	100	80.945	Hippocampus_comes
ENSODEG00000019152	-	100	80.915	ENSIPUG00000014417	GTPBP4	100	80.915	Ictalurus_punctatus
ENSODEG00000019152	-	100	94.637	ENSSTOG00000010042	-	100	94.637	Ictidomys_tridecemlineatus
ENSODEG00000019152	-	100	85.962	ENSSTOG00000023023	-	100	85.962	Ictidomys_tridecemlineatus
ENSODEG00000019152	-	100	92.744	ENSJJAG00000010021	Gtpbp4	100	92.744	Jaculus_jaculus
ENSODEG00000019152	-	100	78.707	ENSKMAG00000021705	gtpbp4	100	78.707	Kryptolebias_marmoratus
ENSODEG00000019152	-	100	75.906	ENSLBEG00000021419	gtpbp4	100	79.592	Labrus_bergylta
ENSODEG00000019152	-	100	82.019	ENSLACG00000001449	GTPBP4	100	82.019	Latimeria_chalumnae
ENSODEG00000019152	-	100	78.923	ENSLOCG00000012279	gtpbp4	100	78.923	Lepisosteus_oculatus
ENSODEG00000019152	-	100	93.060	ENSLAFG00000018578	GTPBP4	100	93.060	Loxodonta_africana
ENSODEG00000019152	-	100	93.691	ENSMFAG00000046251	GTPBP4	100	93.691	Macaca_fascicularis
ENSODEG00000019152	-	100	90.852	ENSMMUG00000010813	GTPBP4	100	90.852	Macaca_mulatta
ENSODEG00000019152	-	100	93.849	ENSMNEG00000044366	GTPBP4	100	93.849	Macaca_nemestrina
ENSODEG00000019152	-	100	93.691	ENSMLEG00000039605	GTPBP4	100	93.691	Mandrillus_leucophaeus
ENSODEG00000019152	-	100	81.230	ENSMAMG00000013763	gtpbp4	92	81.230	Mastacembelus_armatus
ENSODEG00000019152	-	100	81.230	ENSMZEG00005006621	gtpbp4	100	81.230	Maylandia_zebra
ENSODEG00000019152	-	100	94.479	ENSMAUG00000000571	Gtpbp4	100	94.479	Mesocricetus_auratus
ENSODEG00000019152	-	100	94.164	ENSMICG00000013332	GTPBP4	100	94.164	Microcebus_murinus
ENSODEG00000019152	-	100	94.795	ENSMOCG00000002209	Gtpbp4	100	94.795	Microtus_ochrogaster
ENSODEG00000019152	-	100	77.603	ENSMMOG00000011257	gtpbp4	100	77.603	Mola_mola
ENSODEG00000019152	-	100	89.117	ENSMODG00000005978	GTPBP4	100	89.117	Monodelphis_domestica
ENSODEG00000019152	-	100	79.338	ENSMALG00000012488	gtpbp4	100	79.338	Monopterus_albus
ENSODEG00000019152	-	99	93.038	MGP_CAROLIEiJ_G0018215	Gtpbp4	100	93.659	Mus_caroli
ENSODEG00000019152	-	100	94.164	ENSMUSG00000021149	Gtpbp4	100	94.164	Mus_musculus
ENSODEG00000019152	-	100	94.006	MGP_PahariEiJ_G0019265	Gtpbp4	100	94.006	Mus_pahari
ENSODEG00000019152	-	99	93.987	MGP_SPRETEiJ_G0019073	Gtpbp4	100	93.987	Mus_spretus
ENSODEG00000019152	-	93	92.504	ENSMPUG00000016221	GTPBP4	100	92.504	Mustela_putorius_furo
ENSODEG00000019152	-	100	92.902	ENSMLUG00000028192	GTPBP4	100	92.902	Myotis_lucifugus
ENSODEG00000019152	-	100	93.060	ENSNGAG00000015364	Gtpbp4	100	93.060	Nannospalax_galili
ENSODEG00000019152	-	86	86.420	ENSNBRG00000019965	gtpbp4	86	86.420	Neolamprologus_brichardi
ENSODEG00000019152	-	100	93.849	ENSNLEG00000013495	GTPBP4	100	93.849	Nomascus_leucogenys
ENSODEG00000019152	-	64	87.879	ENSMEUG00000016215	-	72	90.625	Notamacropus_eugenii
ENSODEG00000019152	-	89	95.418	ENSOPRG00000008671	GTPBP4	86	95.418	Ochotona_princeps
ENSODEG00000019152	-	100	81.230	ENSONIG00000017707	gtpbp4	100	81.230	Oreochromis_niloticus
ENSODEG00000019152	-	99	86.593	ENSOANG00000006095	-	99	86.593	Ornithorhynchus_anatinus
ENSODEG00000019152	-	100	92.587	ENSOCUG00000016120	-	100	92.587	Oryctolagus_cuniculus
ENSODEG00000019152	-	59	86.016	ENSOCUG00000014716	-	100	86.016	Oryctolagus_cuniculus
ENSODEG00000019152	-	100	79.653	ENSORLG00000006151	gtpbp4	100	79.653	Oryzias_latipes
ENSODEG00000019152	-	100	79.653	ENSORLG00020020899	gtpbp4	100	79.653	Oryzias_latipes_hni
ENSODEG00000019152	-	100	79.495	ENSORLG00015020562	gtpbp4	100	79.495	Oryzias_latipes_hsok
ENSODEG00000019152	-	100	79.653	ENSOMEG00000019684	gtpbp4	100	79.653	Oryzias_melastigma
ENSODEG00000019152	-	100	93.849	ENSOGAG00000011941	GTPBP4	100	93.849	Otolemur_garnettii
ENSODEG00000019152	-	100	91.523	ENSOARG00000015047	GTPBP4	100	91.366	Ovis_aries
ENSODEG00000019152	-	100	93.533	ENSPPAG00000042066	GTPBP4	100	93.533	Pan_paniscus
ENSODEG00000019152	-	100	93.691	ENSPPRG00000009895	GTPBP4	100	93.691	Panthera_pardus
ENSODEG00000019152	-	100	93.691	ENSPTIG00000008569	GTPBP4	100	93.691	Panthera_tigris_altaica
ENSODEG00000019152	-	71	93.377	ENSPTRG00000002236	GTPBP4	86	93.960	Pan_troglodytes
ENSODEG00000019152	-	100	93.849	ENSPANG00000023543	GTPBP4	100	93.849	Papio_anubis
ENSODEG00000019152	-	100	80.599	ENSPKIG00000012301	gtpbp4	100	80.599	Paramormyrops_kingsleyae
ENSODEG00000019152	-	56	89.076	ENSPSIG00000005442	GTPBP4	93	89.076	Pelodiscus_sinensis
ENSODEG00000019152	-	100	77.603	ENSPMGG00000001462	gtpbp4	100	77.603	Periophthalmus_magnuspinnatus
ENSODEG00000019152	-	100	94.006	ENSPEMG00000015091	-	100	94.006	Peromyscus_maniculatus_bairdii
ENSODEG00000019152	-	100	70.347	ENSPEMG00000012279	-	100	70.347	Peromyscus_maniculatus_bairdii
ENSODEG00000019152	-	100	74.132	ENSPMAG00000000905	gtpbp4	100	74.132	Petromyzon_marinus
ENSODEG00000019152	-	100	89.590	ENSPCIG00000026082	GTPBP4	100	89.590	Phascolarctos_cinereus
ENSODEG00000019152	-	100	81.073	ENSPFOG00000000026	gtpbp4	100	81.073	Poecilia_formosa
ENSODEG00000019152	-	92	81.538	ENSPLAG00000002898	gtpbp4	97	81.538	Poecilia_latipinna
ENSODEG00000019152	-	100	81.230	ENSPMEG00000016422	gtpbp4	100	81.230	Poecilia_mexicana
ENSODEG00000019152	-	100	76.972	ENSPREG00000019870	gtpbp4	100	76.972	Poecilia_reticulata
ENSODEG00000019152	-	100	93.691	ENSPPYG00000002037	GTPBP4	100	93.691	Pongo_abelii
ENSODEG00000019152	-	97	87.642	ENSPCOG00000014602	-	100	87.642	Propithecus_coquereli
ENSODEG00000019152	-	100	89.590	ENSPCOG00000014382	-	100	89.590	Propithecus_coquereli
ENSODEG00000019152	-	92	93.396	ENSPVAG00000005882	GTPBP4	86	93.396	Pteropus_vampyrus
ENSODEG00000019152	-	100	71.924	ENSPNYG00000024251	gtpbp4	100	71.924	Pundamilia_nyererei
ENSODEG00000019152	-	100	81.230	ENSPNAG00000019977	gtpbp4	100	81.230	Pygocentrus_nattereri
ENSODEG00000019152	-	100	93.711	ENSRNOG00000016217	Gtpbp4	100	94.025	Rattus_norvegicus
ENSODEG00000019152	-	100	93.691	ENSRBIG00000028875	GTPBP4	100	93.691	Rhinopithecus_bieti
ENSODEG00000019152	-	100	93.691	ENSRROG00000030798	GTPBP4	100	93.691	Rhinopithecus_roxellana
ENSODEG00000019152	-	99	44.907	YPL093W	-	99	44.907	Saccharomyces_cerevisiae
ENSODEG00000019152	-	100	93.711	ENSSBOG00000028421	GTPBP4	100	93.711	Saimiri_boliviensis_boliviensis
ENSODEG00000019152	-	99	88.854	ENSSHAG00000014713	GTPBP4	94	88.854	Sarcophilus_harrisii
ENSODEG00000019152	-	100	80.599	ENSSFOG00015003167	gtpbp4	100	80.599	Scleropages_formosus
ENSODEG00000019152	-	100	80.442	ENSSMAG00000005863	gtpbp4	100	80.442	Scophthalmus_maximus
ENSODEG00000019152	-	100	80.757	ENSSDUG00000006534	gtpbp4	100	80.757	Seriola_dumerili
ENSODEG00000019152	-	100	80.757	ENSSLDG00000020688	gtpbp4	100	80.757	Seriola_lalandi_dorsalis
ENSODEG00000019152	-	61	98.020	ENSSARG00000003409	-	79	98.020	Sorex_araneus
ENSODEG00000019152	-	100	84.858	ENSSPUG00000002153	GTPBP4	100	84.858	Sphenodon_punctatus
ENSODEG00000019152	-	63	71.033	ENSSPAG00000014583	gtpbp4	100	71.033	Stegastes_partitus
ENSODEG00000019152	-	100	89.748	ENSSSCG00000028602	GTPBP4	100	89.748	Sus_scrofa
ENSODEG00000019152	-	99	83.599	ENSTGUG00000000820	GTPBP4	100	84.873	Taeniopygia_guttata
ENSODEG00000019152	-	100	79.653	ENSTRUG00000003900	gtpbp4	100	79.653	Takifugu_rubripes
ENSODEG00000019152	-	100	80.915	ENSTNIG00000007992	gtpbp4	100	80.915	Tetraodon_nigroviridis
ENSODEG00000019152	-	100	79.343	ENSTBEG00000003613	GTPBP4	100	79.186	Tupaia_belangeri
ENSODEG00000019152	-	100	86.562	ENSTTRG00000011163	GTPBP4	100	86.562	Tursiops_truncatus
ENSODEG00000019152	-	100	93.375	ENSUAMG00000013191	GTPBP4	100	93.375	Ursus_americanus
ENSODEG00000019152	-	93	93.015	ENSUMAG00000016138	GTPBP4	100	93.015	Ursus_maritimus
ENSODEG00000019152	-	100	93.533	ENSVVUG00000008608	GTPBP4	98	93.533	Vulpes_vulpes
ENSODEG00000019152	-	100	72.713	ENSXETG00000018097	gtpbp4	100	73.874	Xenopus_tropicalis
ENSODEG00000019152	-	100	75.039	ENSXCOG00000019953	gtpbp4	98	75.039	Xiphophorus_couchianus
ENSODEG00000019152	-	100	80.377	ENSXMAG00000006719	gtpbp4	100	80.377	Xiphophorus_maculatus