EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019204 (Gene tree)
Gene ID: 101591322
Gene Symbol: RBM12B
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 2856 bases
Position: chrJH651649.1:4166352-4169207
Accession: 101591322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025872	RRM_1	PF00076.22	5.5e-28	1	2
ENSODEP00000025872	RRM_1	PF00076.22	5.5e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026269	RBM12B-201	2856	XM_004641311	ENSODEP00000025872	951 (aa)	XP_004641368	UPI000333EF53

Gene Model

Click here to download ENSODEG00000019204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019204	RBM12B	53	71.264	ENSODEG00000013870	RBM12	52	71.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019204	RBM12B	100	81.019	ENSG00000183808	RBM12B	100	98.780	Homo_sapiens
ENSODEG00000019204	RBM12B	60	48.052	ENSAPOG00000013963	rbm12b	87	48.052	Acanthochromis_polyacanthus
ENSODEG00000019204	RBM12B	100	77.927	ENSAMEG00000007134	RBM12B	100	76.471	Ailuropoda_melanoleuca
ENSODEG00000019204	RBM12B	51	41.463	ENSACIG00000014943	rbm12b	99	40.635	Amphilophus_citrinellus
ENSODEG00000019204	RBM12B	65	38.849	ENSAOCG00000024270	rbm12b	96	38.849	Amphiprion_ocellaris
ENSODEG00000019204	RBM12B	58	47.761	ENSAPEG00000022079	rbm12b	98	41.250	Amphiprion_percula
ENSODEG00000019204	RBM12B	59	46.753	ENSATEG00000004578	rbm12b	85	46.753	Anabas_testudineus
ENSODEG00000019204	RBM12B	75	60.403	ENSAPLG00000002020	RBM12B	100	60.403	Anas_platyrhynchos
ENSODEG00000019204	RBM12B	60	42.957	ENSACAG00000003463	RBM12B	53	42.957	Anolis_carolinensis
ENSODEG00000019204	RBM12B	100	79.592	ENSANAG00000034015	RBM12B	98	81.069	Aotus_nancymaae
ENSODEG00000019204	RBM12B	59	48.052	ENSACLG00000005578	rbm12b	84	48.052	Astatotilapia_calliptera
ENSODEG00000019204	RBM12B	62	48.052	ENSACLG00000005575	rbm12b	88	48.052	Astatotilapia_calliptera
ENSODEG00000019204	RBM12B	59	42.857	ENSAMXG00000041973	rbm12b	87	42.945	Astyanax_mexicanus
ENSODEG00000019204	RBM12B	100	76.155	ENSBTAG00000013408	RBM12B	100	76.495	Bos_taurus
ENSODEG00000019204	RBM12B	100	78.921	ENSCAFG00000009109	RBM12B	100	79.779	Canis_familiaris
ENSODEG00000019204	RBM12B	100	74.974	ENSCAFG00020012203	RBM12B	100	78.361	Canis_lupus_dingo
ENSODEG00000019204	RBM12B	88	75.000	ENSCHIG00000006790	RBM12B	97	75.000	Capra_hircus
ENSODEG00000019204	RBM12B	100	81.624	ENSTSYG00000012515	RBM12B	100	81.320	Carlito_syrichta
ENSODEG00000019204	RBM12B	100	93.908	ENSCAPG00000003543	RBM12B	100	93.908	Cavia_aperea
ENSODEG00000019204	RBM12B	100	93.908	ENSCPOG00000007815	RBM12B	100	93.908	Cavia_porcellus
ENSODEG00000019204	RBM12B	100	73.166	ENSCATG00000030769	RBM12B	100	78.174	Cercocebus_atys
ENSODEG00000019204	RBM12B	100	94.958	ENSCLAG00000017617	RBM12B	100	94.958	Chinchilla_lanigera
ENSODEG00000019204	RBM12B	100	81.219	ENSCSAG00000018559	RBM12B	100	78.222	Chlorocebus_sabaeus
ENSODEG00000019204	RBM12B	99	80.000	ENSCHOG00000008934	RBM12B	100	81.013	Choloepus_hoffmanni
ENSODEG00000019204	RBM12B	74	64.179	ENSCPBG00000003061	RBM12B	100	64.179	Chrysemys_picta_bellii
ENSODEG00000019204	RBM12B	100	72.775	ENSCANG00000030379	RBM12B	100	78.174	Colobus_angolensis_palliatus
ENSODEG00000019204	RBM12B	100	73.469	ENSCGRG00001008710	-	97	70.168	Cricetulus_griseus_chok1gshd
ENSODEG00000019204	RBM12B	60	48.052	ENSCSEG00000004610	rbm12b	82	48.052	Cynoglossus_semilaevis
ENSODEG00000019204	RBM12B	51	32.328	ENSCVAG00000009259	-	99	32.328	Cyprinodon_variegatus
ENSODEG00000019204	RBM12B	66	49.351	ENSCVAG00000011047	rbm12b	97	49.351	Cyprinodon_variegatus
ENSODEG00000019204	RBM12B	61	42.857	ENSDARG00000079717	rbm12b	81	42.857	Danio_rerio
ENSODEG00000019204	RBM12B	100	78.785	ENSDNOG00000041608	RBM12B	100	74.730	Dasypus_novemcinctus
ENSODEG00000019204	RBM12B	100	80.709	ENSDORG00000024034	-	100	80.709	Dipodomys_ordii
ENSODEG00000019204	RBM12B	67	70.755	ENSETEG00000013005	-	85	71.384	Echinops_telfairi
ENSODEG00000019204	RBM12B	65	31.004	ENSEBUG00000009015	-	99	31.004	Eptatretus_burgeri
ENSODEG00000019204	RBM12B	100	75.420	ENSEASG00005016297	RBM12B	100	79.307	Equus_asinus_asinus
ENSODEG00000019204	RBM12B	100	80.996	ENSECAG00000017870	RBM12B	100	80.793	Equus_caballus
ENSODEG00000019204	RBM12B	100	72.613	ENSFCAG00000029274	RBM12B	100	77.731	Felis_catus
ENSODEG00000019204	RBM12B	75	58.389	ENSFALG00000014893	RBM12B	100	58.389	Ficedula_albicollis
ENSODEG00000019204	RBM12B	100	91.605	ENSFDAG00000005576	RBM12B	97	91.605	Fukomys_damarensis
ENSODEG00000019204	RBM12B	59	49.351	ENSFHEG00000016425	rbm12b	86	49.351	Fundulus_heteroclitus
ENSODEG00000019204	RBM12B	61	45.333	ENSGMOG00000013467	rbm12b	90	45.333	Gadus_morhua
ENSODEG00000019204	RBM12B	75	59.060	ENSGALG00000035129	RBM12B	100	59.060	Gallus_gallus
ENSODEG00000019204	RBM12B	50	30.171	ENSGAFG00000007845	zgc:153215	98	30.171	Gambusia_affinis
ENSODEG00000019204	RBM12B	60	49.351	ENSGAFG00000007224	rbm12b	87	49.351	Gambusia_affinis
ENSODEG00000019204	RBM12B	60	45.455	ENSGACG00000008682	rbm12b	86	45.455	Gasterosteus_aculeatus
ENSODEG00000019204	RBM12B	73	64.662	ENSGAGG00000009774	RBM12B	100	64.662	Gopherus_agassizii
ENSODEG00000019204	RBM12B	100	75.000	ENSGGOG00000011909	RBM12B	100	78.782	Gorilla_gorilla
ENSODEG00000019204	RBM12B	60	48.052	ENSHBUG00000016227	rbm12b	84	48.052	Haplochromis_burtoni
ENSODEG00000019204	RBM12B	100	91.988	ENSHGLG00000009063	RBM12B	100	91.988	Heterocephalus_glaber_female
ENSODEG00000019204	RBM12B	100	91.988	ENSHGLG00100021324	RBM12B	100	91.988	Heterocephalus_glaber_male
ENSODEG00000019204	RBM12B	65	41.353	ENSHCOG00000014952	rbm12b	97	41.353	Hippocampus_comes
ENSODEG00000019204	RBM12B	72	48.315	ENSIPUG00000001167	RBM12B	97	48.315	Ictalurus_punctatus
ENSODEG00000019204	RBM12B	100	81.456	ENSSTOG00000027445	RBM12B	100	76.551	Ictidomys_tridecemlineatus
ENSODEG00000019204	RBM12B	100	73.214	ENSJJAG00000004165	-	100	75.210	Jaculus_jaculus
ENSODEG00000019204	RBM12B	59	48.684	ENSKMAG00000013715	rbm12b	89	48.684	Kryptolebias_marmoratus
ENSODEG00000019204	RBM12B	59	48.684	ENSKMAG00000013704	rbm12b	86	48.684	Kryptolebias_marmoratus
ENSODEG00000019204	RBM12B	62	67.949	ENSLACG00000007177	RBM12B	99	52.941	Latimeria_chalumnae
ENSODEG00000019204	RBM12B	59	50.649	ENSLOCG00000018344	rbm12b	86	50.649	Lepisosteus_oculatus
ENSODEG00000019204	RBM12B	100	72.865	ENSLAFG00000029949	RBM12B	100	71.174	Loxodonta_africana
ENSODEG00000019204	RBM12B	100	73.194	ENSMFAG00000045430	RBM12B	100	78.279	Macaca_fascicularis
ENSODEG00000019204	RBM12B	100	81.219	ENSMMUG00000005558	RBM12B	100	80.357	Macaca_mulatta
ENSODEG00000019204	RBM12B	100	73.194	ENSMNEG00000041292	RBM12B	100	78.279	Macaca_nemestrina
ENSODEG00000019204	RBM12B	100	76.341	ENSMLEG00000037288	RBM12B	100	79.622	Mandrillus_leucophaeus
ENSODEG00000019204	RBM12B	60	50.649	ENSMAMG00000011998	rbm12b	87	50.649	Mastacembelus_armatus
ENSODEG00000019204	RBM12B	62	48.052	ENSMZEG00005015005	rbm12b	90	48.052	Maylandia_zebra
ENSODEG00000019204	RBM12B	62	48.052	ENSMZEG00005014845	rbm12b	89	47.297	Maylandia_zebra
ENSODEG00000019204	RBM12B	51	58.641	ENSMGAG00000011985	RBM12B	99	58.641	Meleagris_gallopavo
ENSODEG00000019204	RBM12B	100	73.605	ENSMAUG00000021752	-	100	70.693	Mesocricetus_auratus
ENSODEG00000019204	RBM12B	100	79.212	ENSMICG00000036969	RBM12B	100	77.101	Microcebus_murinus
ENSODEG00000019204	RBM12B	100	65.477	ENSMOCG00000005603	-	100	67.715	Microtus_ochrogaster
ENSODEG00000019204	RBM12B	69	37.223	ENSMMOG00000002404	rbm12b	94	37.223	Mola_mola
ENSODEG00000019204	RBM12B	90	64.476	ENSMODG00000007436	RBM12B	98	65.415	Monodelphis_domestica
ENSODEG00000019204	RBM12B	59	51.282	ENSMALG00000012059	rbm12b	85	51.282	Monopterus_albus
ENSODEG00000019204	RBM12B	100	71.547	ENSMUSG00000052137	Rbm12b2	100	66.352	Mus_musculus
ENSODEG00000019204	RBM12B	100	65.199	ENSMUSG00000046667	Rbm12b1	100	66.143	Mus_musculus
ENSODEG00000019204	RBM12B	100	65.612	MGP_SPRETEiJ_G0026765	-	100	69.906	Mus_spretus
ENSODEG00000019204	RBM12B	100	71.099	MGP_SPRETEiJ_G0026766	-	100	66.876	Mus_spretus
ENSODEG00000019204	RBM12B	100	80.420	ENSMPUG00000018637	RBM12B	100	75.421	Mustela_putorius_furo
ENSODEG00000019204	RBM12B	100	74.097	ENSMLUG00000002359	RBM12B	100	74.483	Myotis_lucifugus
ENSODEG00000019204	RBM12B	100	79.874	ENSNGAG00000002801	-	100	80.294	Nannospalax_galili
ENSODEG00000019204	RBM12B	62	48.052	ENSNBRG00000015057	rbm12b	90	48.052	Neolamprologus_brichardi
ENSODEG00000019204	RBM12B	100	75.393	ENSNLEG00000032050	RBM12B	100	79.727	Nomascus_leucogenys
ENSODEG00000019204	RBM12B	62	48.052	ENSONIG00000020612	rbm12b	90	48.052	Oreochromis_niloticus
ENSODEG00000019204	RBM12B	77	68.000	ENSOANG00000015735	-	97	68.000	Ornithorhynchus_anatinus
ENSODEG00000019204	RBM12B	100	74.895	ENSOCUG00000010353	RBM12B	100	77.859	Oryctolagus_cuniculus
ENSODEG00000019204	RBM12B	60	50.649	ENSORLG00000008228	rbm12b	85	50.649	Oryzias_latipes
ENSODEG00000019204	RBM12B	60	50.649	ENSORLG00020013619	rbm12b	85	50.649	Oryzias_latipes_hni
ENSODEG00000019204	RBM12B	60	50.649	ENSORLG00015019999	rbm12b	85	50.649	Oryzias_latipes_hsok
ENSODEG00000019204	RBM12B	59	51.948	ENSOMEG00000022523	rbm12b	83	51.948	Oryzias_melastigma
ENSODEG00000019204	RBM12B	100	81.339	ENSOGAG00000002979	RBM12B	100	81.339	Otolemur_garnettii
ENSODEG00000019204	RBM12B	100	73.845	ENSPTIG00000020071	RBM12B	100	77.731	Panthera_tigris_altaica
ENSODEG00000019204	RBM12B	100	75.499	ENSPTRG00000020420	RBM12B	100	80.252	Pan_troglodytes
ENSODEG00000019204	RBM12B	100	76.446	ENSPANG00000035535	RBM12B	100	79.727	Papio_anubis
ENSODEG00000019204	RBM12B	59	49.351	ENSPKIG00000018719	rbm12b	85	49.351	Paramormyrops_kingsleyae
ENSODEG00000019204	RBM12B	50	32.296	ENSPKIG00000014851	zgc:153215	98	32.296	Paramormyrops_kingsleyae
ENSODEG00000019204	RBM12B	74	64.925	ENSPSIG00000001348	RBM12B	100	64.925	Pelodiscus_sinensis
ENSODEG00000019204	RBM12B	100	71.039	ENSPEMG00000008279	-	100	71.983	Peromyscus_maniculatus_bairdii
ENSODEG00000019204	RBM12B	94	64.609	ENSPCIG00000008556	RBM12B	100	64.609	Phascolarctos_cinereus
ENSODEG00000019204	RBM12B	63	42.500	ENSPFOG00000020937	rbm12b	90	42.500	Poecilia_formosa
ENSODEG00000019204	RBM12B	63	42.500	ENSPLAG00000018782	rbm12b	93	42.500	Poecilia_latipinna
ENSODEG00000019204	RBM12B	63	42.241	ENSPMEG00000011418	rbm12b	93	42.241	Poecilia_mexicana
ENSODEG00000019204	RBM12B	63	42.500	ENSPREG00000020770	rbm12b	93	42.500	Poecilia_reticulata
ENSODEG00000019204	RBM12B	100	80.819	ENSPPYG00000018745	RBM12B	100	79.920	Pongo_abelii
ENSODEG00000019204	RBM12B	100	75.420	ENSPCOG00000023546	RBM12B	100	79.832	Propithecus_coquereli
ENSODEG00000019204	RBM12B	100	78.184	ENSPVAG00000011803	RBM12B	100	79.853	Pteropus_vampyrus
ENSODEG00000019204	RBM12B	62	48.052	ENSPNYG00000016696	rbm12b	90	48.052	Pundamilia_nyererei
ENSODEG00000019204	RBM12B	59	49.351	ENSPNAG00000008126	rbm12b	84	49.351	Pygocentrus_nattereri
ENSODEG00000019204	RBM12B	100	63.627	ENSRNOG00000016330	Rbm12b	100	65.900	Rattus_norvegicus
ENSODEG00000019204	RBM12B	90	68.176	ENSRNOG00000055292	LOC679087	100	65.076	Rattus_norvegicus
ENSODEG00000019204	RBM12B	100	76.050	ENSRBIG00000035046	RBM12B	100	79.643	Rhinopithecus_bieti
ENSODEG00000019204	RBM12B	100	69.874	ENSRROG00000023660	RBM12B	100	77.125	Rhinopithecus_roxellana
ENSODEG00000019204	RBM12B	100	76.972	ENSSBOG00000027592	RBM12B	100	79.307	Saimiri_boliviensis_boliviensis
ENSODEG00000019204	RBM12B	90	64.789	ENSSHAG00000015335	RBM12B	100	65.728	Sarcophilus_harrisii
ENSODEG00000019204	RBM12B	51	34.195	ENSSFOG00015009427	zgc:153215	99	34.195	Scleropages_formosus
ENSODEG00000019204	RBM12B	60	46.753	ENSSFOG00015001584	rbm12b	86	46.753	Scleropages_formosus
ENSODEG00000019204	RBM12B	60	49.351	ENSSMAG00000019708	rbm12b	87	49.351	Scophthalmus_maximus
ENSODEG00000019204	RBM12B	60	49.351	ENSSDUG00000006856	rbm12b	86	49.351	Seriola_dumerili
ENSODEG00000019204	RBM12B	60	49.351	ENSSLDG00000016156	rbm12b	86	49.351	Seriola_lalandi_dorsalis
ENSODEG00000019204	RBM12B	83	77.508	ENSSARG00000011845	-	86	77.508	Sorex_araneus
ENSODEG00000019204	RBM12B	51	55.385	ENSSPUG00000016954	RBM12B	91	55.385	Sphenodon_punctatus
ENSODEG00000019204	RBM12B	67	49.351	ENSSPAG00000006774	rbm12b	97	49.351	Stegastes_partitus
ENSODEG00000019204	RBM12B	100	80.832	ENSSSCG00000006110	RBM12B	100	79.154	Sus_scrofa
ENSODEG00000019204	RBM12B	53	55.728	ENSTGUG00000011860	RBM12B	100	55.728	Taeniopygia_guttata
ENSODEG00000019204	RBM12B	60	49.351	ENSTRUG00000013738	rbm12b	87	49.351	Takifugu_rubripes
ENSODEG00000019204	RBM12B	86	80.630	ENSTBEG00000000449	RBM12B	87	80.630	Tupaia_belangeri
ENSODEG00000019204	RBM12B	100	76.341	ENSUAMG00000023639	RBM12B	100	79.937	Ursus_americanus
ENSODEG00000019204	RBM12B	100	80.672	ENSUMAG00000016008	RBM12B	100	80.672	Ursus_maritimus
ENSODEG00000019204	RBM12B	88	90.378	ENSVPAG00000001080	RBM12B	90	90.378	Vicugna_pacos
ENSODEG00000019204	RBM12B	100	75.605	ENSVVUG00000002694	RBM12B	100	78.466	Vulpes_vulpes
ENSODEG00000019204	RBM12B	59	42.466	ENSXETG00000014696	rbm12b	81	40.230	Xenopus_tropicalis
ENSODEG00000019204	RBM12B	72	46.332	ENSXETG00000014694	rbm12b	100	46.843	Xenopus_tropicalis
ENSODEG00000019204	RBM12B	52	30.453	ENSXETG00000025920	-	97	30.453	Xenopus_tropicalis
ENSODEG00000019204	RBM12B	51	30.620	ENSXCOG00000019654	zgc:153215	98	30.620	Xiphophorus_couchianus
ENSODEG00000019204	RBM12B	63	43.333	ENSXMAG00000014213	rbm12b	93	43.333	Xiphophorus_maculatus