EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019218 (Gene tree)
Gene ID: 101581584
Gene Symbol: -
Alias: -
Full Name: 60S ribosomal protein L13a pseudogene
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 612 bases
Position: chrJH651642.1:6590504-6591115
Accession: 101581584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025882	Ribosomal_L13	PF00572.18	8.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026283	-	612	-	ENSODEP00000025882	203 (aa)	-	UPI000334142B

Gene Model

Click here to download ENSODEG00000019218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019218	-	100	99.015	ENSODEG00000016831	-	100	99.015
ENSODEG00000019218	-	100	98.522	ENSODEG00000020468	-	100	98.522
ENSODEG00000019218	-	100	97.537	ENSODEG00000020233	-	100	97.537

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019218	-	100	97.044	ENSG00000142541	RPL13A	100	97.183	Homo_sapiens
ENSODEG00000019218	-	98	86.935	ENSAPOG00000014084	rpl13a	97	86.935	Acanthochromis_polyacanthus
ENSODEG00000019218	-	100	97.537	ENSAMEG00000014027	RPL13A	100	97.537	Ailuropoda_melanoleuca
ENSODEG00000019218	-	98	85.859	ENSACIG00000004871	rpl13a	99	85.859	Amphilophus_citrinellus
ENSODEG00000019218	-	99	86.500	ENSAOCG00000002123	rpl13a	98	86.500	Amphiprion_ocellaris
ENSODEG00000019218	-	99	86.500	ENSAPEG00000018777	rpl13a	98	86.500	Amphiprion_percula
ENSODEG00000019218	-	99	87.000	ENSATEG00000012828	rpl13a	98	87.000	Anabas_testudineus
ENSODEG00000019218	-	100	88.670	ENSACAG00000017279	RPL13A	100	88.670	Anolis_carolinensis
ENSODEG00000019218	-	70	81.757	ENSANAG00000037443	-	100	81.757	Aotus_nancymaae
ENSODEG00000019218	-	99	81.683	ENSANAG00000021423	-	100	81.683	Aotus_nancymaae
ENSODEG00000019218	-	100	96.552	ENSANAG00000030530	RPL13A	100	96.552	Aotus_nancymaae
ENSODEG00000019218	-	70	95.070	ENSANAG00000013769	-	100	95.070	Aotus_nancymaae
ENSODEG00000019218	-	100	84.804	ENSANAG00000020868	-	100	84.804	Aotus_nancymaae
ENSODEG00000019218	-	99	85.500	ENSACLG00000016552	rpl13a	98	85.500	Astatotilapia_calliptera
ENSODEG00000019218	-	98	85.930	ENSAMXG00000033532	rpl13a	97	85.930	Astyanax_mexicanus
ENSODEG00000019218	-	100	96.552	ENSBTAG00000005296	RPL13A	100	96.552	Bos_taurus
ENSODEG00000019218	-	98	52.020	WBGene00004428	rpl-16	98	52.020	Caenorhabditis_elegans
ENSODEG00000019218	-	100	94.581	ENSCJAG00000040678	-	100	94.581	Callithrix_jacchus
ENSODEG00000019218	-	100	89.655	ENSCJAG00000046649	-	100	89.655	Callithrix_jacchus
ENSODEG00000019218	-	82	80.233	ENSCJAG00000008837	-	98	80.233	Callithrix_jacchus
ENSODEG00000019218	-	100	97.044	ENSCJAG00000000072	-	100	97.044	Callithrix_jacchus
ENSODEG00000019218	-	100	97.537	ENSCAFG00000029892	RPL13A	100	97.537	Canis_familiaris
ENSODEG00000019218	-	99	61.000	ENSCAFG00000003946	-	97	61.000	Canis_familiaris
ENSODEG00000019218	-	100	97.537	ENSCAFG00020024917	-	100	97.537	Canis_lupus_dingo
ENSODEG00000019218	-	100	92.611	ENSCHIG00000012581	-	100	92.611	Capra_hircus
ENSODEG00000019218	-	100	96.552	ENSCHIG00000021732	-	100	96.552	Capra_hircus
ENSODEG00000019218	-	98	72.864	ENSTSYG00000028115	-	96	75.377	Carlito_syrichta
ENSODEG00000019218	-	100	97.044	ENSTSYG00000008791	-	100	97.044	Carlito_syrichta
ENSODEG00000019218	-	98	97.487	ENSCAPG00000007267	RPL13A	100	97.487	Cavia_aperea
ENSODEG00000019218	-	100	98.030	ENSCPOG00000012417	RPL13A	100	98.030	Cavia_porcellus
ENSODEG00000019218	-	62	96.800	ENSCPOG00000023083	-	59	93.233	Cavia_porcellus
ENSODEG00000019218	-	100	97.044	ENSCCAG00000022898	RPL13A	100	97.044	Cebus_capucinus
ENSODEG00000019218	-	68	89.928	ENSCCAG00000020555	-	100	89.928	Cebus_capucinus
ENSODEG00000019218	-	68	96.403	ENSCCAG00000029220	-	96	96.403	Cebus_capucinus
ENSODEG00000019218	-	99	89.109	ENSCCAG00000034479	-	99	89.109	Cebus_capucinus
ENSODEG00000019218	-	100	96.552	ENSCATG00000011576	RPL13A	100	96.552	Cercocebus_atys
ENSODEG00000019218	-	100	98.522	ENSCLAG00000012323	RPL13A	100	98.522	Chinchilla_lanigera
ENSODEG00000019218	-	100	95.074	ENSCSAG00000019054	-	100	95.074	Chlorocebus_sabaeus
ENSODEG00000019218	-	100	87.192	ENSCPBG00000014922	RPL13A	95	87.192	Chrysemys_picta_bellii
ENSODEG00000019218	-	99	63.366	ENSCING00000014892	-	98	63.366	Ciona_intestinalis
ENSODEG00000019218	-	99	65.025	ENSCSAVG00000000666	-	99	65.025	Ciona_savignyi
ENSODEG00000019218	-	100	96.552	ENSCANG00000040885	-	100	96.552	Colobus_angolensis_palliatus
ENSODEG00000019218	-	100	95.567	ENSCANG00000000304	-	100	95.567	Colobus_angolensis_palliatus
ENSODEG00000019218	-	81	82.530	ENSCANG00000018732	-	100	82.530	Colobus_angolensis_palliatus
ENSODEG00000019218	-	100	96.059	ENSCGRG00001018651	-	100	96.059	Cricetulus_griseus_chok1gshd
ENSODEG00000019218	-	100	96.059	ENSCGRG00000005890	-	100	96.059	Cricetulus_griseus_crigri
ENSODEG00000019218	-	99	77.228	ENSCSEG00000002640	rpl13a	98	77.228	Cynoglossus_semilaevis
ENSODEG00000019218	-	99	75.500	ENSCVAG00000011043	rpl13a	97	75.500	Cyprinodon_variegatus
ENSODEG00000019218	-	99	86.000	ENSDARG00000044093	rpl13a	98	86.000	Danio_rerio
ENSODEG00000019218	-	100	96.552	ENSDNOG00000035370	-	100	96.552	Dasypus_novemcinctus
ENSODEG00000019218	-	100	96.059	ENSDORG00000012194	-	100	96.059	Dipodomys_ordii
ENSODEG00000019218	-	99	57.000	FBgn0037351	RpL13A	98	57.000	Drosophila_melanogaster
ENSODEG00000019218	-	100	93.103	ENSETEG00000005732	-	100	93.103	Echinops_telfairi
ENSODEG00000019218	-	100	78.325	ENSETEG00000017076	-	100	78.325	Echinops_telfairi
ENSODEG00000019218	-	98	68.342	ENSEBUG00000007234	rpl13a	100	67.553	Eptatretus_burgeri
ENSODEG00000019218	-	98	96.465	ENSEASG00005005007	RPL13A	86	96.465	Equus_asinus_asinus
ENSODEG00000019218	-	100	96.552	ENSECAG00000015832	RPL13A	100	96.552	Equus_caballus
ENSODEG00000019218	-	74	96.026	ENSEEUG00000014071	RPL13A	74	96.026	Erinaceus_europaeus
ENSODEG00000019218	-	98	86.432	ENSELUG00000014577	rpl13a	97	86.432	Esox_lucius
ENSODEG00000019218	-	100	96.059	ENSFCAG00000009194	RPL13A	100	96.059	Felis_catus
ENSODEG00000019218	-	100	98.522	ENSFDAG00000016892	RPL13A	100	98.522	Fukomys_damarensis
ENSODEG00000019218	-	99	86.500	ENSFHEG00000004165	rpl13a	98	86.500	Fundulus_heteroclitus
ENSODEG00000019218	-	98	85.427	ENSGMOG00000010791	rpl13a	93	85.427	Gadus_morhua
ENSODEG00000019218	-	99	86.500	ENSGAFG00000007578	rpl13a	98	86.500	Gambusia_affinis
ENSODEG00000019218	-	99	86.000	ENSGACG00000009310	rpl13a	99	86.000	Gasterosteus_aculeatus
ENSODEG00000019218	-	94	81.771	ENSGAGG00000002437	RPL13A	74	81.771	Gopherus_agassizii
ENSODEG00000019218	-	100	94.581	ENSGGOG00000023324	-	100	94.581	Gorilla_gorilla
ENSODEG00000019218	-	100	97.044	ENSGGOG00000002932	RPL13A	100	97.044	Gorilla_gorilla
ENSODEG00000019218	-	68	90.647	ENSGGOG00000039250	-	84	90.647	Gorilla_gorilla
ENSODEG00000019218	-	67	92.647	ENSGGOG00000039904	-	72	92.647	Gorilla_gorilla
ENSODEG00000019218	-	99	85.500	ENSHBUG00000023575	rpl13a	98	85.500	Haplochromis_burtoni
ENSODEG00000019218	-	100	99.015	ENSHGLG00000010070	RPL13A	100	99.015	Heterocephalus_glaber_female
ENSODEG00000019218	-	100	99.015	ENSHGLG00100010359	RPL13A	100	99.015	Heterocephalus_glaber_male
ENSODEG00000019218	-	99	85.500	ENSHCOG00000007902	rpl13a	99	86.364	Hippocampus_comes
ENSODEG00000019218	-	98	85.427	ENSIPUG00000014098	rpl13a	94	85.427	Ictalurus_punctatus
ENSODEG00000019218	-	100	94.608	ENSSTOG00000021558	RPL13A	99	96.465	Ictidomys_tridecemlineatus
ENSODEG00000019218	-	100	97.537	ENSJJAG00000000343	-	100	97.537	Jaculus_jaculus
ENSODEG00000019218	-	99	85.000	ENSKMAG00000009039	rpl13a	98	85.000	Kryptolebias_marmoratus
ENSODEG00000019218	-	99	86.500	ENSLBEG00000005434	rpl13a	98	86.500	Labrus_bergylta
ENSODEG00000019218	-	97	82.412	ENSLACG00000019092	RPL13A	95	82.828	Latimeria_chalumnae
ENSODEG00000019218	-	99	87.000	ENSLOCG00000004388	rpl13a	98	87.000	Lepisosteus_oculatus
ENSODEG00000019218	-	100	96.059	ENSLAFG00000016213	RPL13A	100	96.059	Loxodonta_africana
ENSODEG00000019218	-	100	88.942	ENSMFAG00000002765	-	100	88.942	Macaca_fascicularis
ENSODEG00000019218	-	100	85.714	ENSMFAG00000003121	-	100	86.207	Macaca_fascicularis
ENSODEG00000019218	-	100	96.552	ENSMFAG00000001097	-	100	96.552	Macaca_fascicularis
ENSODEG00000019218	-	100	88.942	ENSMMUG00000009018	-	100	88.942	Macaca_mulatta
ENSODEG00000019218	-	100	96.552	ENSMMUG00000007551	RPL13A	100	96.552	Macaca_mulatta
ENSODEG00000019218	-	100	96.552	ENSMNEG00000034977	RPL13A	100	96.552	Macaca_nemestrina
ENSODEG00000019218	-	58	98.305	ENSMLEG00000038132	-	100	98.305	Mandrillus_leucophaeus
ENSODEG00000019218	-	99	86.000	ENSMAMG00000007425	rpl13a	84	86.000	Mastacembelus_armatus
ENSODEG00000019218	-	99	85.500	ENSMZEG00005004952	rpl13a	98	85.500	Maylandia_zebra
ENSODEG00000019218	-	100	91.133	ENSMAUG00000020351	-	100	91.133	Mesocricetus_auratus
ENSODEG00000019218	-	100	83.251	ENSMAUG00000012558	-	100	83.251	Mesocricetus_auratus
ENSODEG00000019218	-	100	96.059	ENSMAUG00000016402	-	100	96.059	Mesocricetus_auratus
ENSODEG00000019218	-	100	75.369	ENSMICG00000043457	-	100	75.369	Microcebus_murinus
ENSODEG00000019218	-	100	97.537	ENSMICG00000009318	-	100	97.537	Microcebus_murinus
ENSODEG00000019218	-	100	76.847	ENSMOCG00000016427	-	100	76.847	Microtus_ochrogaster
ENSODEG00000019218	-	100	95.567	ENSMOCG00000002774	-	100	95.567	Microtus_ochrogaster
ENSODEG00000019218	-	100	85.714	ENSMMOG00000010248	rpl13a	100	85.714	Mola_mola
ENSODEG00000019218	-	99	86.000	ENSMALG00000012804	rpl13a	98	86.000	Monopterus_albus
ENSODEG00000019218	-	100	95.567	MGP_CAROLIEiJ_G0029698	-	100	95.567	Mus_caroli
ENSODEG00000019218	-	100	96.059	ENSMUSG00000074129	Rpl13a	100	96.059	Mus_musculus
ENSODEG00000019218	-	100	95.567	MGP_PahariEiJ_G0012923	-	100	95.567	Mus_pahari
ENSODEG00000019218	-	100	96.059	MGP_SPRETEiJ_G0030796	Rpl13a	100	96.059	Mus_spretus
ENSODEG00000019218	-	100	93.103	MGP_SPRETEiJ_G0017763	-	100	93.103	Mus_spretus
ENSODEG00000019218	-	100	97.044	ENSMPUG00000002604	RPL13A	100	97.044	Mustela_putorius_furo
ENSODEG00000019218	-	98	96.985	ENSMLUG00000004945	RPL13A	98	96.985	Myotis_lucifugus
ENSODEG00000019218	-	100	97.537	ENSNGAG00000021984	-	100	97.537	Nannospalax_galili
ENSODEG00000019218	-	99	85.500	ENSNBRG00000024166	rpl13a	98	85.500	Neolamprologus_brichardi
ENSODEG00000019218	-	99	90.594	ENSNLEG00000012957	-	98	90.594	Nomascus_leucogenys
ENSODEG00000019218	-	100	92.611	ENSNLEG00000033213	-	100	92.611	Nomascus_leucogenys
ENSODEG00000019218	-	100	89.320	ENSNLEG00000005211	RPL13A	100	89.320	Nomascus_leucogenys
ENSODEG00000019218	-	85	82.659	ENSMEUG00000005199	RPL13A	100	82.659	Notamacropus_eugenii
ENSODEG00000019218	-	100	92.118	ENSOPRG00000001194	RPL13A	100	92.118	Ochotona_princeps
ENSODEG00000019218	-	99	85.000	ENSONIG00000003560	rpl13a	98	85.000	Oreochromis_niloticus
ENSODEG00000019218	-	100	92.611	ENSOANG00000000828	RPL13A	100	92.611	Ornithorhynchus_anatinus
ENSODEG00000019218	-	77	84.076	ENSOCUG00000026592	-	97	84.076	Oryctolagus_cuniculus
ENSODEG00000019218	-	99	85.000	ENSORLG00000014599	rpl13a	88	85.000	Oryzias_latipes
ENSODEG00000019218	-	99	85.000	ENSORLG00020013090	rpl13a	88	85.000	Oryzias_latipes_hni
ENSODEG00000019218	-	99	85.075	ENSORLG00015011634	rpl13a	98	85.075	Oryzias_latipes_hsok
ENSODEG00000019218	-	99	86.000	ENSOMEG00000010232	rpl13a	88	86.000	Oryzias_melastigma
ENSODEG00000019218	-	99	94.581	ENSOGAG00000030280	-	99	94.581	Otolemur_garnettii
ENSODEG00000019218	-	100	97.044	ENSOGAG00000004625	-	100	97.044	Otolemur_garnettii
ENSODEG00000019218	-	100	89.655	ENSOGAG00000026177	-	100	89.655	Otolemur_garnettii
ENSODEG00000019218	-	97	77.551	ENSOARG00000017798	-	96	77.551	Ovis_aries
ENSODEG00000019218	-	99	96.020	ENSOARG00000013169	-	99	96.020	Ovis_aries
ENSODEG00000019218	-	100	95.074	ENSOARG00000020159	-	100	95.074	Ovis_aries
ENSODEG00000019218	-	100	97.044	ENSPPAG00000037365	RPL13A	100	97.044	Pan_paniscus
ENSODEG00000019218	-	100	94.581	ENSPPAG00000023659	-	100	94.581	Pan_paniscus
ENSODEG00000019218	-	67	92.647	ENSPPAG00000006023	-	71	92.647	Pan_paniscus
ENSODEG00000019218	-	100	92.611	ENSPPAG00000019107	-	100	92.611	Pan_paniscus
ENSODEG00000019218	-	100	96.059	ENSPPRG00000011265	RPL13A	100	96.059	Panthera_pardus
ENSODEG00000019218	-	67	97.778	ENSPTRG00000052284	-	92	97.778	Pan_troglodytes
ENSODEG00000019218	-	100	97.044	ENSPTRG00000011298	RPL13A	100	97.044	Pan_troglodytes
ENSODEG00000019218	-	100	95.567	ENSPTRG00000050666	-	100	95.567	Pan_troglodytes
ENSODEG00000019218	-	100	93.596	ENSPTRG00000049426	-	100	93.596	Pan_troglodytes
ENSODEG00000019218	-	70	96.479	ENSPTRG00000042978	-	100	96.479	Pan_troglodytes
ENSODEG00000019218	-	100	96.552	ENSPANG00000012050	RPL13A	100	96.552	Papio_anubis
ENSODEG00000019218	-	99	85.500	ENSPKIG00000000720	rpl13a	98	85.500	Paramormyrops_kingsleyae
ENSODEG00000019218	-	98	88.442	ENSPSIG00000018234	RPL13A	100	88.442	Pelodiscus_sinensis
ENSODEG00000019218	-	98	86.935	ENSPMGG00000010552	rpl13a	96	86.935	Periophthalmus_magnuspinnatus
ENSODEG00000019218	-	100	96.552	ENSPEMG00000009221	-	100	96.552	Peromyscus_maniculatus_bairdii
ENSODEG00000019218	-	98	85.427	ENSPMAG00000006362	rpl13a	97	85.427	Petromyzon_marinus
ENSODEG00000019218	-	100	92.611	ENSPCIG00000007340	-	100	92.611	Phascolarctos_cinereus
ENSODEG00000019218	-	83	73.964	ENSPCIG00000014063	-	90	73.964	Phascolarctos_cinereus
ENSODEG00000019218	-	99	85.500	ENSPFOG00000013546	rpl13a	98	85.500	Poecilia_formosa
ENSODEG00000019218	-	99	85.500	ENSPLAG00000016066	rpl13a	98	85.500	Poecilia_latipinna
ENSODEG00000019218	-	99	85.500	ENSPMEG00000018384	rpl13a	98	85.500	Poecilia_mexicana
ENSODEG00000019218	-	99	85.500	ENSPREG00000020079	rpl13a	98	85.500	Poecilia_reticulata
ENSODEG00000019218	-	100	97.044	ENSPPYG00000006798	-	100	97.044	Pongo_abelii
ENSODEG00000019218	-	100	97.044	ENSPPYG00000010251	-	100	97.044	Pongo_abelii
ENSODEG00000019218	-	100	96.059	ENSPCAG00000004086	RPL13A	100	96.059	Procavia_capensis
ENSODEG00000019218	-	100	97.537	ENSPCOG00000023898	RPL13A	100	97.537	Propithecus_coquereli
ENSODEG00000019218	-	98	77.340	ENSPCOG00000016293	-	98	77.340	Propithecus_coquereli
ENSODEG00000019218	-	100	96.552	ENSPVAG00000010958	RPL13A	100	96.552	Pteropus_vampyrus
ENSODEG00000019218	-	99	85.500	ENSPNYG00000019779	rpl13a	98	85.500	Pundamilia_nyererei
ENSODEG00000019218	-	98	86.364	ENSPNAG00000026887	rpl13a	97	86.364	Pygocentrus_nattereri
ENSODEG00000019218	-	100	96.059	ENSRNOG00000062298	Rpl13a	100	96.059	Rattus_norvegicus
ENSODEG00000019218	-	100	96.059	ENSRBIG00000044737	RPL13A	99	96.059	Rhinopithecus_bieti
ENSODEG00000019218	-	67	88.235	ENSRROG00000028369	-	68	88.235	Rhinopithecus_roxellana
ENSODEG00000019218	-	100	96.552	ENSRROG00000042976	-	100	96.552	Rhinopithecus_roxellana
ENSODEG00000019218	-	100	90.148	ENSRROG00000036041	-	100	90.148	Rhinopithecus_roxellana
ENSODEG00000019218	-	92	55.729	YNL069C	RPL16B	97	56.250	Saccharomyces_cerevisiae
ENSODEG00000019218	-	94	56.923	YIL133C	RPL16A	98	56.923	Saccharomyces_cerevisiae
ENSODEG00000019218	-	100	78.636	ENSSBOG00000024635	-	100	78.636	Saimiri_boliviensis_boliviensis
ENSODEG00000019218	-	100	96.059	ENSSBOG00000028481	RPL13A	100	96.059	Saimiri_boliviensis_boliviensis
ENSODEG00000019218	-	98	83.920	ENSSFOG00015001972	rpl13a	98	83.500	Scleropages_formosus
ENSODEG00000019218	-	99	86.000	ENSSDUG00000017181	rpl13a	100	86.432	Seriola_dumerili
ENSODEG00000019218	-	99	86.000	ENSSLDG00000002561	rpl13a	98	86.000	Seriola_lalandi_dorsalis
ENSODEG00000019218	-	82	60.241	ENSSLDG00000007920	-	85	60.714	Seriola_lalandi_dorsalis
ENSODEG00000019218	-	53	73.394	ENSSPUG00000014548	RPL13A	86	73.394	Sphenodon_punctatus
ENSODEG00000019218	-	100	96.569	ENSSSCG00000034448	-	100	96.569	Sus_scrofa
ENSODEG00000019218	-	95	73.958	ENSSSCG00000031204	-	92	79.070	Sus_scrofa
ENSODEG00000019218	-	99	86.000	ENSTRUG00000023611	rpl13a	98	86.000	Takifugu_rubripes
ENSODEG00000019218	-	100	96.552	ENSTTRG00000005485	RPL13A	100	96.552	Tursiops_truncatus
ENSODEG00000019218	-	100	97.537	ENSUAMG00000008438	RPL13A	100	97.537	Ursus_americanus
ENSODEG00000019218	-	100	97.537	ENSUMAG00000002385	RPL13A	100	97.537	Ursus_maritimus
ENSODEG00000019218	-	98	94.444	ENSVPAG00000006564	RPL13A	100	94.444	Vicugna_pacos
ENSODEG00000019218	-	100	97.537	ENSVVUG00000022597	RPL13A	100	97.537	Vulpes_vulpes
ENSODEG00000019218	-	98	90.955	ENSXETG00000014144	rpl13a	86	90.955	Xenopus_tropicalis
ENSODEG00000019218	-	99	86.500	ENSXCOG00000004826	rpl13a	98	86.500	Xiphophorus_couchianus
ENSODEG00000019218	-	99	86.500	ENSXMAG00000027604	rpl13a	98	86.500	Xiphophorus_maculatus