EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019266 (Gene tree)
Gene ID: 101587328
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein F
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1248 bases
Position: chrJH651596.1:1041715-1042962
Accession: 101587328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025927	zf-RNPHF	PF08080.12	1.6e-22	1	1
ENSODEP00000025927	RRM_1	PF00076.22	7.2e-29	1	2
ENSODEP00000025927	RRM_1	PF00076.22	7.2e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026331	-	1248	XM_004636562	ENSODEP00000025927	415 (aa)	XP_004636619	UPI000184D220

Gene Model

Click here to download ENSODEG00000019266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019266's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019266	-	94	43.421	ENSODEG00000001826	-	71	43.421
ENSODEG00000019266	-	99	92.961	ENSODEG00000002359	-	99	92.961
ENSODEG00000019266	-	50	71.667	ENSODEG00000004517	HNRNPH3	93	58.104
ENSODEG00000019266	-	99	75.243	ENSODEG00000001195	-	96	74.023
ENSODEG00000019266	-	87	42.105	ENSODEG00000010775	-	98	42.105
ENSODEG00000019266	-	99	75.000	ENSODEG00000007058	-	96	74.478
ENSODEG00000019266	-	87	41.558	ENSODEG00000004897	-	92	41.558
ENSODEG00000019266	-	89	61.725	ENSODEG00000007170	-	96	58.937

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019266	-	99	97.826	ENSG00000169813	HNRNPF	99	97.826	Homo_sapiens
ENSODEG00000019266	-	99	98.068	ENSAMEG00000018983	HNRNPF	99	98.068	Ailuropoda_melanoleuca
ENSODEG00000019266	-	99	94.686	ENSANAG00000033285	-	99	94.686	Aotus_nancymaae
ENSODEG00000019266	-	88	82.114	ENSANAG00000033452	-	89	82.114	Aotus_nancymaae
ENSODEG00000019266	-	99	97.585	ENSBTAG00000008853	HNRNPF	99	97.585	Bos_taurus
ENSODEG00000019266	-	99	80.383	ENSBTAG00000020513	-	99	80.383	Bos_taurus
ENSODEG00000019266	-	99	97.826	ENSCJAG00000008291	HNRNPF	99	97.826	Callithrix_jacchus
ENSODEG00000019266	-	99	98.068	ENSCAFG00000007044	HNRNPF	99	98.068	Canis_familiaris
ENSODEG00000019266	-	99	97.585	ENSCHIG00000006714	HNRNPF	99	97.585	Capra_hircus
ENSODEG00000019266	-	97	73.039	ENSCHIG00000022971	-	99	73.039	Capra_hircus
ENSODEG00000019266	-	99	97.343	ENSTSYG00000030439	-	99	97.343	Carlito_syrichta
ENSODEG00000019266	-	100	82.933	ENSTSYG00000002112	-	100	82.933	Carlito_syrichta
ENSODEG00000019266	-	100	100.000	ENSCAPG00000011521	HNRNPF	100	100.000	Cavia_aperea
ENSODEG00000019266	-	100	100.000	ENSCPOG00000003678	HNRNPF	100	100.000	Cavia_porcellus
ENSODEG00000019266	-	99	78.261	ENSCCAG00000028687	-	99	78.261	Cebus_capucinus
ENSODEG00000019266	-	99	97.585	ENSCCAG00000031457	-	99	97.585	Cebus_capucinus
ENSODEG00000019266	-	100	100.000	ENSCLAG00000005161	HNRNPF	100	100.000	Chinchilla_lanigera
ENSODEG00000019266	-	99	96.377	ENSCANG00000003086	-	99	96.377	Colobus_angolensis_palliatus
ENSODEG00000019266	-	99	98.792	ENSCGRG00001016276	Hnrnpf	99	98.792	Cricetulus_griseus_chok1gshd
ENSODEG00000019266	-	94	74.293	ENSCGRG00001016206	-	88	74.293	Cricetulus_griseus_chok1gshd
ENSODEG00000019266	-	99	93.961	ENSDNOG00000030849	-	99	93.961	Dasypus_novemcinctus
ENSODEG00000019266	-	99	97.343	ENSDORG00000024298	-	99	97.343	Dipodomys_ordii
ENSODEG00000019266	-	99	94.686	ENSDORG00000024936	-	99	94.686	Dipodomys_ordii
ENSODEG00000019266	-	99	88.889	ENSDORG00000005431	-	99	88.889	Dipodomys_ordii
ENSODEG00000019266	-	99	90.580	ENSDORG00000008260	-	99	90.580	Dipodomys_ordii
ENSODEG00000019266	-	99	98.309	ENSEASG00005006903	HNRNPF	99	98.309	Equus_asinus_asinus
ENSODEG00000019266	-	99	94.444	ENSECAG00000003229	HNRNPF	99	94.444	Equus_caballus
ENSODEG00000019266	-	99	98.068	ENSFCAG00000028219	-	99	98.068	Felis_catus
ENSODEG00000019266	-	100	100.000	ENSFDAG00000011431	-	100	100.000	Fukomys_damarensis
ENSODEG00000019266	-	99	90.585	ENSFDAG00000007858	-	98	90.585	Fukomys_damarensis
ENSODEG00000019266	-	100	81.928	ENSFDAG00000015308	-	99	81.928	Fukomys_damarensis
ENSODEG00000019266	-	90	97.594	ENSGGOG00000010867	HNRNPF	93	97.594	Gorilla_gorilla
ENSODEG00000019266	-	100	99.759	ENSHGLG00000000147	-	100	99.759	Heterocephalus_glaber_female
ENSODEG00000019266	-	99	88.889	ENSHGLG00000017607	-	100	88.889	Heterocephalus_glaber_female
ENSODEG00000019266	-	98	95.213	ENSHGLG00000014139	-	97	95.213	Heterocephalus_glaber_female
ENSODEG00000019266	-	99	95.411	ENSHGLG00000010276	-	99	95.411	Heterocephalus_glaber_female
ENSODEG00000019266	-	91	88.032	ENSHGLG00100010905	-	97	88.032	Heterocephalus_glaber_male
ENSODEG00000019266	-	100	95.663	ENSHGLG00100019572	-	100	95.663	Heterocephalus_glaber_male
ENSODEG00000019266	-	99	98.762	ENSHGLG00100020825	-	100	98.762	Heterocephalus_glaber_male
ENSODEG00000019266	-	99	91.162	ENSHGLG00100019910	-	100	91.162	Heterocephalus_glaber_male
ENSODEG00000019266	-	99	95.169	ENSHGLG00100019558	-	100	95.169	Heterocephalus_glaber_male
ENSODEG00000019266	-	100	83.933	ENSSTOG00000023820	-	100	83.933	Ictidomys_tridecemlineatus
ENSODEG00000019266	-	99	99.517	ENSSTOG00000025560	-	99	99.517	Ictidomys_tridecemlineatus
ENSODEG00000019266	-	99	88.675	ENSSTOG00000022853	-	99	88.675	Ictidomys_tridecemlineatus
ENSODEG00000019266	-	99	87.923	ENSJJAG00000017385	-	99	87.923	Jaculus_jaculus
ENSODEG00000019266	-	99	81.884	ENSJJAG00000022288	-	99	81.884	Jaculus_jaculus
ENSODEG00000019266	-	99	64.493	ENSJJAG00000014424	-	99	64.493	Jaculus_jaculus
ENSODEG00000019266	-	98	94.355	ENSJJAG00000014334	-	99	94.355	Jaculus_jaculus
ENSODEG00000019266	-	99	73.141	ENSJJAG00000000554	-	99	73.141	Jaculus_jaculus
ENSODEG00000019266	-	100	95.673	ENSLAFG00000000424	HNRNPF	100	95.673	Loxodonta_africana
ENSODEG00000019266	-	99	97.826	ENSMFAG00000021184	HNRNPF	99	97.826	Macaca_fascicularis
ENSODEG00000019266	-	99	97.826	ENSMMUG00000020982	HNRNPF	99	97.826	Macaca_mulatta
ENSODEG00000019266	-	99	97.826	ENSMLEG00000023515	HNRNPF	99	97.826	Mandrillus_leucophaeus
ENSODEG00000019266	-	99	98.792	ENSMAUG00000007892	Hnrnpf	99	98.792	Mesocricetus_auratus
ENSODEG00000019266	-	99	80.238	ENSMICG00000044171	-	99	80.238	Microcebus_murinus
ENSODEG00000019266	-	99	79.903	ENSMICG00000043739	-	99	79.903	Microcebus_murinus
ENSODEG00000019266	-	99	97.585	ENSMOCG00000014915	Hnrnpf	99	97.585	Microtus_ochrogaster
ENSODEG00000019266	-	99	98.792	ENSMUSG00000042079	Hnrnpf	99	98.792	Mus_musculus
ENSODEG00000019266	-	99	97.585	MGP_PahariEiJ_G0026903	-	99	97.585	Mus_pahari
ENSODEG00000019266	-	99	98.241	ENSMPUG00000017283	HNRNPF	98	98.241	Mustela_putorius_furo
ENSODEG00000019266	-	99	95.663	ENSMLUG00000007261	HNRNPF	99	95.663	Myotis_lucifugus
ENSODEG00000019266	-	99	98.309	ENSNGAG00000010409	-	99	98.309	Nannospalax_galili
ENSODEG00000019266	-	99	70.531	ENSNGAG00000009482	-	99	70.531	Nannospalax_galili
ENSODEG00000019266	-	99	80.193	ENSNGAG00000014079	-	99	80.193	Nannospalax_galili
ENSODEG00000019266	-	99	97.826	ENSNLEG00000019098	HNRNPF	99	97.826	Nomascus_leucogenys
ENSODEG00000019266	-	99	98.551	ENSOCUG00000024719	-	99	98.551	Oryctolagus_cuniculus
ENSODEG00000019266	-	99	92.995	ENSOCUG00000024604	-	99	92.995	Oryctolagus_cuniculus
ENSODEG00000019266	-	100	91.106	ENSOGAG00000013734	-	100	91.106	Otolemur_garnettii
ENSODEG00000019266	-	99	93.720	ENSOGAG00000030480	-	99	93.720	Otolemur_garnettii
ENSODEG00000019266	-	99	98.634	ENSOARG00000003995	HNRNPF	91	98.634	Ovis_aries
ENSODEG00000019266	-	99	80.193	ENSOARG00000016658	-	99	80.193	Ovis_aries
ENSODEG00000019266	-	99	98.068	ENSPPRG00000021222	HNRNPF	99	98.068	Panthera_pardus
ENSODEG00000019266	-	99	98.068	ENSPTIG00000009644	HNRNPF	99	98.068	Panthera_tigris_altaica
ENSODEG00000019266	-	99	97.826	ENSPTRG00000002446	HNRNPF	99	97.826	Pan_troglodytes
ENSODEG00000019266	-	99	97.585	ENSPANG00000002212	HNRNPF	99	97.585	Papio_anubis
ENSODEG00000019266	-	99	97.826	ENSPPYG00000002212	HNRNPF	99	97.826	Pongo_abelii
ENSODEG00000019266	-	99	95.422	ENSPCAG00000013169	HNRNPF	99	95.422	Procavia_capensis
ENSODEG00000019266	-	99	96.860	ENSPVAG00000011646	HNRNPF	99	96.860	Pteropus_vampyrus
ENSODEG00000019266	-	99	98.792	ENSRNOG00000014562	Hnrnpf	99	98.792	Rattus_norvegicus
ENSODEG00000019266	-	99	97.826	ENSRROG00000001235	HNRNPF	99	97.826	Rhinopithecus_roxellana
ENSODEG00000019266	-	99	97.826	ENSSBOG00000018361	HNRNPF	99	97.826	Saimiri_boliviensis_boliviensis
ENSODEG00000019266	-	99	97.826	ENSSARG00000010059	HNRNPF	99	97.826	Sorex_araneus
ENSODEG00000019266	-	99	58.072	ENSSSCG00000024956	-	96	58.072	Sus_scrofa
ENSODEG00000019266	-	99	98.148	ENSSSCG00000010203	-	99	98.148	Sus_scrofa
ENSODEG00000019266	-	97	71.287	ENSTBEG00000016094	HNRNPF	99	71.287	Tupaia_belangeri
ENSODEG00000019266	-	99	98.068	ENSUAMG00000000455	HNRNPF	99	98.068	Ursus_americanus
ENSODEG00000019266	-	99	98.068	ENSUMAG00000016485	HNRNPF	99	98.068	Ursus_maritimus
ENSODEG00000019266	-	99	98.068	ENSVVUG00000021261	HNRNPF	99	98.068	Vulpes_vulpes