EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019419 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 243 bases
Position: chrJH651604.1:2978627-2978869
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026055	LSM	PF01423.22	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026484	-	243	-	ENSODEP00000026055	80 (aa)	-	-

Gene Model

Click here to download ENSODEG00000019419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019419's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019419	-	83	50.000	ENSODEG00000010328	-	78	50.000
ENSODEG00000019419	-	95	86.842	ENSODEG00000018684	-	99	86.842
ENSODEG00000019419	-	100	95.000	ENSODEG00000002307	-	100	95.000
ENSODEG00000019419	-	100	93.750	ENSODEG00000020420	-	100	93.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019419	-	100	96.250	ENSG00000164167	LSM6	100	96.250	Homo_sapiens
ENSODEG00000019419	-	100	93.750	ENSAPOG00000019832	lsm6	100	93.750	Acanthochromis_polyacanthus
ENSODEG00000019419	-	100	96.250	ENSAMEG00000016671	LSM6	100	96.250	Ailuropoda_melanoleuca
ENSODEG00000019419	-	100	93.750	ENSACIG00000016711	lsm6	100	93.750	Amphilophus_citrinellus
ENSODEG00000019419	-	100	93.750	ENSAOCG00000002110	lsm6	52	93.750	Amphiprion_ocellaris
ENSODEG00000019419	-	100	93.750	ENSAPEG00000023992	lsm6	100	93.750	Amphiprion_percula
ENSODEG00000019419	-	100	93.750	ENSATEG00000012610	lsm6	100	93.750	Anabas_testudineus
ENSODEG00000019419	-	96	96.104	ENSAPLG00000012594	LSM6	99	96.104	Anas_platyrhynchos
ENSODEG00000019419	-	100	96.250	ENSACAG00000004004	LSM6	100	96.250	Anolis_carolinensis
ENSODEG00000019419	-	100	83.750	ENSANAG00000021839	-	100	83.750	Aotus_nancymaae
ENSODEG00000019419	-	100	96.250	ENSANAG00000030568	-	100	96.250	Aotus_nancymaae
ENSODEG00000019419	-	100	93.750	ENSACLG00000025621	lsm6	100	93.750	Astatotilapia_calliptera
ENSODEG00000019419	-	100	95.000	ENSAMXG00000038738	lsm6	100	95.000	Astyanax_mexicanus
ENSODEG00000019419	-	100	96.250	ENSBTAG00000014060	LSM6	100	96.250	Bos_taurus
ENSODEG00000019419	-	100	90.000	ENSBTAG00000052085	-	100	90.000	Bos_taurus
ENSODEG00000019419	-	94	80.000	WBGene00003080	lsm-6	97	80.000	Caenorhabditis_elegans
ENSODEG00000019419	-	100	96.250	ENSCJAG00000002482	LSM6	100	96.250	Callithrix_jacchus
ENSODEG00000019419	-	100	96.250	ENSCAFG00000007738	LSM6	100	96.250	Canis_familiaris
ENSODEG00000019419	-	100	96.250	ENSCAFG00020025902	LSM6	100	96.250	Canis_lupus_dingo
ENSODEG00000019419	-	100	80.000	ENSCHIG00000024198	-	95	80.000	Capra_hircus
ENSODEG00000019419	-	100	96.250	ENSCHIG00000010334	-	100	96.250	Capra_hircus
ENSODEG00000019419	-	89	98.592	ENSCHIG00000012864	-	100	98.592	Capra_hircus
ENSODEG00000019419	-	80	90.625	ENSTSYG00000012759	-	84	90.625	Carlito_syrichta
ENSODEG00000019419	-	100	96.250	ENSTSYG00000026972	LSM6	100	96.250	Carlito_syrichta
ENSODEG00000019419	-	100	96.250	ENSCAPG00000008104	LSM6	100	96.250	Cavia_aperea
ENSODEG00000019419	-	81	95.385	ENSCAPG00000011179	-	100	95.385	Cavia_aperea
ENSODEG00000019419	-	100	96.250	ENSCPOG00000032655	LSM6	100	96.250	Cavia_porcellus
ENSODEG00000019419	-	100	96.250	ENSCCAG00000036437	LSM6	100	96.250	Cebus_capucinus
ENSODEG00000019419	-	99	94.937	ENSCCAG00000020665	-	99	94.937	Cebus_capucinus
ENSODEG00000019419	-	100	72.500	ENSCATG00000038799	-	100	72.500	Cercocebus_atys
ENSODEG00000019419	-	100	96.250	ENSCATG00000002770	-	100	96.250	Cercocebus_atys
ENSODEG00000019419	-	100	96.250	ENSCLAG00000005495	LSM6	100	96.250	Chinchilla_lanigera
ENSODEG00000019419	-	89	78.873	ENSCLAG00000005685	-	100	78.873	Chinchilla_lanigera
ENSODEG00000019419	-	100	96.250	ENSCSAG00000003421	LSM6	100	96.250	Chlorocebus_sabaeus
ENSODEG00000019419	-	100	75.000	ENSCHOG00000003420	LSM6	100	75.000	Choloepus_hoffmanni
ENSODEG00000019419	-	100	96.250	ENSCPBG00000027472	LSM6	84	96.250	Chrysemys_picta_bellii
ENSODEG00000019419	-	95	94.737	ENSCING00000019152	-	93	94.737	Ciona_intestinalis
ENSODEG00000019419	-	95	96.053	ENSCSAVG00000002065	-	93	96.053	Ciona_savignyi
ENSODEG00000019419	-	100	96.250	ENSCANG00000041263	-	100	96.250	Colobus_angolensis_palliatus
ENSODEG00000019419	-	100	68.750	ENSCANG00000035214	-	100	68.750	Colobus_angolensis_palliatus
ENSODEG00000019419	-	100	96.250	ENSCANG00000006849	-	100	96.250	Colobus_angolensis_palliatus
ENSODEG00000019419	-	100	96.250	ENSCGRG00001017142	Lsm6	100	96.250	Cricetulus_griseus_chok1gshd
ENSODEG00000019419	-	100	96.250	ENSCGRG00000008320	Lsm6	100	96.250	Cricetulus_griseus_crigri
ENSODEG00000019419	-	100	93.750	ENSCSEG00000000423	lsm6	100	93.750	Cynoglossus_semilaevis
ENSODEG00000019419	-	100	93.750	ENSCVAG00000001592	lsm6	100	93.750	Cyprinodon_variegatus
ENSODEG00000019419	-	100	95.000	ENSDARG00000036995	lsm6	100	95.000	Danio_rerio
ENSODEG00000019419	-	86	98.551	ENSDNOG00000040186	-	74	98.551	Dasypus_novemcinctus
ENSODEG00000019419	-	100	95.000	ENSDNOG00000044848	-	100	95.000	Dasypus_novemcinctus
ENSODEG00000019419	-	100	96.250	ENSDORG00000000933	Lsm6	100	96.250	Dipodomys_ordii
ENSODEG00000019419	-	96	83.117	FBgn0034564	CG9344	97	83.117	Drosophila_melanogaster
ENSODEG00000019419	-	60	95.833	ENSETEG00000013098	LSM6	100	95.833	Echinops_telfairi
ENSODEG00000019419	-	100	95.000	ENSEBUG00000017073	lsm6	100	95.000	Eptatretus_burgeri
ENSODEG00000019419	-	86	98.551	ENSEASG00005001533	LSM6	72	98.551	Equus_asinus_asinus
ENSODEG00000019419	-	100	96.250	ENSECAG00000021036	LSM6	100	96.250	Equus_caballus
ENSODEG00000019419	-	99	68.354	ENSEEUG00000002101	LSM6	100	68.354	Erinaceus_europaeus
ENSODEG00000019419	-	100	95.000	ENSELUG00000014301	LSM6	100	95.000	Esox_lucius
ENSODEG00000019419	-	100	96.250	ENSFCAG00000003047	LSM6	100	96.250	Felis_catus
ENSODEG00000019419	-	100	96.250	ENSFALG00000005509	LSM6	92	96.250	Ficedula_albicollis
ENSODEG00000019419	-	100	83.750	ENSFDAG00000019073	-	100	83.750	Fukomys_damarensis
ENSODEG00000019419	-	100	96.250	ENSFDAG00000020913	-	100	96.250	Fukomys_damarensis
ENSODEG00000019419	-	100	93.750	ENSFHEG00000007948	lsm6	100	93.750	Fundulus_heteroclitus
ENSODEG00000019419	-	100	93.750	ENSGMOG00000015550	lsm6	100	93.750	Gadus_morhua
ENSODEG00000019419	-	100	96.250	ENSGALG00000009985	LSM6	100	96.250	Gallus_gallus
ENSODEG00000019419	-	100	93.750	ENSGAFG00000017763	lsm6	100	93.750	Gambusia_affinis
ENSODEG00000019419	-	99	94.937	ENSGACG00000017223	lsm6	99	94.937	Gasterosteus_aculeatus
ENSODEG00000019419	-	100	96.250	ENSGAGG00000020980	LSM6	100	96.250	Gopherus_agassizii
ENSODEG00000019419	-	100	96.250	ENSGGOG00000001310	LSM6	100	96.250	Gorilla_gorilla
ENSODEG00000019419	-	100	93.750	ENSHBUG00000008618	lsm6	100	93.750	Haplochromis_burtoni
ENSODEG00000019419	-	100	96.250	ENSHGLG00000000205	LSM6	100	96.250	Heterocephalus_glaber_female
ENSODEG00000019419	-	100	96.250	ENSHGLG00100014341	LSM6	100	96.250	Heterocephalus_glaber_male
ENSODEG00000019419	-	100	93.750	ENSHCOG00000005591	lsm6	100	93.750	Hippocampus_comes
ENSODEG00000019419	-	100	93.750	ENSIPUG00000004508	lsm6	100	93.750	Ictalurus_punctatus
ENSODEG00000019419	-	100	96.250	ENSSTOG00000002678	LSM6	100	96.250	Ictidomys_tridecemlineatus
ENSODEG00000019419	-	96	75.325	ENSJJAG00000016942	-	97	75.325	Jaculus_jaculus
ENSODEG00000019419	-	100	86.250	ENSJJAG00000011211	-	100	86.250	Jaculus_jaculus
ENSODEG00000019419	-	100	96.250	ENSJJAG00000013845	-	100	96.250	Jaculus_jaculus
ENSODEG00000019419	-	100	93.750	ENSKMAG00000004105	lsm6	100	93.750	Kryptolebias_marmoratus
ENSODEG00000019419	-	100	93.750	ENSLBEG00000018441	lsm6	100	93.750	Labrus_bergylta
ENSODEG00000019419	-	100	96.250	ENSLACG00000006937	LSM6	100	96.250	Latimeria_chalumnae
ENSODEG00000019419	-	100	95.000	ENSLOCG00000008852	lsm6	100	95.000	Lepisosteus_oculatus
ENSODEG00000019419	-	100	93.750	ENSLOCG00000017683	-	100	93.750	Lepisosteus_oculatus
ENSODEG00000019419	-	100	96.250	ENSLAFG00000001952	LSM6	100	96.250	Loxodonta_africana
ENSODEG00000019419	-	100	96.250	ENSMFAG00000033073	LSM6	100	96.250	Macaca_fascicularis
ENSODEG00000019419	-	100	73.750	ENSMNEG00000040412	-	100	73.750	Macaca_nemestrina
ENSODEG00000019419	-	100	96.250	ENSMNEG00000034820	-	100	96.250	Macaca_nemestrina
ENSODEG00000019419	-	100	96.250	ENSMLEG00000035153	LSM6	100	96.250	Mandrillus_leucophaeus
ENSODEG00000019419	-	100	93.750	ENSMAMG00000014029	lsm6	100	93.750	Mastacembelus_armatus
ENSODEG00000019419	-	100	93.750	ENSMZEG00005009146	lsm6	100	93.750	Maylandia_zebra
ENSODEG00000019419	-	100	96.250	ENSMGAG00000003802	LSM6	100	96.250	Meleagris_gallopavo
ENSODEG00000019419	-	100	96.250	ENSMAUG00000014938	Lsm6	100	96.250	Mesocricetus_auratus
ENSODEG00000019419	-	100	96.250	ENSMICG00000042599	LSM6	100	96.250	Microcebus_murinus
ENSODEG00000019419	-	98	88.462	ENSMICG00000047411	-	92	88.462	Microcebus_murinus
ENSODEG00000019419	-	100	96.250	ENSMOCG00000020049	Lsm6	100	96.250	Microtus_ochrogaster
ENSODEG00000019419	-	100	87.500	ENSMMOG00000007379	-	100	87.500	Mola_mola
ENSODEG00000019419	-	100	93.750	ENSMMOG00000005470	lsm6	100	93.750	Mola_mola
ENSODEG00000019419	-	100	96.250	ENSMODG00000000526	LSM6	100	96.250	Monodelphis_domestica
ENSODEG00000019419	-	100	93.750	ENSMALG00000002419	lsm6	100	93.750	Monopterus_albus
ENSODEG00000019419	-	100	96.250	MGP_CAROLIEiJ_G0031245	Lsm6	100	96.250	Mus_caroli
ENSODEG00000019419	-	100	96.250	ENSMUSG00000031683	Lsm6	100	96.250	Mus_musculus
ENSODEG00000019419	-	100	96.250	MGP_PahariEiJ_G0022851	Lsm6	100	96.250	Mus_pahari
ENSODEG00000019419	-	100	96.250	MGP_SPRETEiJ_G0032365	Lsm6	100	96.250	Mus_spretus
ENSODEG00000019419	-	99	96.203	ENSMPUG00000006936	LSM6	92	96.203	Mustela_putorius_furo
ENSODEG00000019419	-	100	96.250	ENSMLUG00000026355	LSM6	100	96.250	Myotis_lucifugus
ENSODEG00000019419	-	100	96.250	ENSNGAG00000019116	Lsm6	100	96.250	Nannospalax_galili
ENSODEG00000019419	-	100	93.750	ENSNBRG00000004887	lsm6	100	93.750	Neolamprologus_brichardi
ENSODEG00000019419	-	100	96.250	ENSNLEG00000005584	LSM6	100	96.250	Nomascus_leucogenys
ENSODEG00000019419	-	100	95.000	ENSOPRG00000011199	LSM6	100	95.000	Ochotona_princeps
ENSODEG00000019419	-	100	93.750	ENSONIG00000010005	lsm6	100	93.750	Oreochromis_niloticus
ENSODEG00000019419	-	98	70.513	ENSOANG00000006895	-	100	70.513	Ornithorhynchus_anatinus
ENSODEG00000019419	-	98	70.513	ENSOANG00000006894	-	100	70.513	Ornithorhynchus_anatinus
ENSODEG00000019419	-	100	92.500	ENSORLG00000024158	lsm6	100	92.500	Oryzias_latipes
ENSODEG00000019419	-	100	92.500	ENSORLG00020017383	lsm6	100	92.500	Oryzias_latipes_hni
ENSODEG00000019419	-	100	92.500	ENSORLG00015016903	lsm6	100	92.500	Oryzias_latipes_hsok
ENSODEG00000019419	-	100	93.750	ENSOMEG00000000074	lsm6	100	93.750	Oryzias_melastigma
ENSODEG00000019419	-	100	96.250	ENSOGAG00000026665	-	100	96.250	Otolemur_garnettii
ENSODEG00000019419	-	100	96.250	ENSOGAG00000033153	-	100	96.250	Otolemur_garnettii
ENSODEG00000019419	-	99	89.873	ENSOARG00000011641	-	92	89.873	Ovis_aries
ENSODEG00000019419	-	86	98.551	ENSOARG00000008509	-	88	98.551	Ovis_aries
ENSODEG00000019419	-	100	96.250	ENSPPAG00000037929	LSM6	100	96.250	Pan_paniscus
ENSODEG00000019419	-	100	96.250	ENSPPRG00000012806	LSM6	100	96.250	Panthera_pardus
ENSODEG00000019419	-	100	96.250	ENSPTIG00000019769	LSM6	100	96.250	Panthera_tigris_altaica
ENSODEG00000019419	-	100	96.250	ENSPTRG00000016488	LSM6	100	96.250	Pan_troglodytes
ENSODEG00000019419	-	100	96.250	ENSPANG00000006552	LSM6	100	96.250	Papio_anubis
ENSODEG00000019419	-	100	95.000	ENSPKIG00000016176	lsm6	100	95.000	Paramormyrops_kingsleyae
ENSODEG00000019419	-	100	96.250	ENSPSIG00000016942	LSM6	100	96.250	Pelodiscus_sinensis
ENSODEG00000019419	-	100	93.750	ENSPMGG00000018004	lsm6	100	93.750	Periophthalmus_magnuspinnatus
ENSODEG00000019419	-	100	96.250	ENSPEMG00000012410	Lsm6	100	96.250	Peromyscus_maniculatus_bairdii
ENSODEG00000019419	-	100	95.000	ENSPMAG00000006949	lsm6	100	95.000	Petromyzon_marinus
ENSODEG00000019419	-	100	96.250	ENSPCIG00000023469	LSM6	80	98.551	Phascolarctos_cinereus
ENSODEG00000019419	-	100	93.750	ENSPFOG00000008881	lsm6	100	93.750	Poecilia_formosa
ENSODEG00000019419	-	100	93.750	ENSPLAG00000003202	lsm6	100	93.750	Poecilia_latipinna
ENSODEG00000019419	-	100	93.750	ENSPMEG00000004000	lsm6	100	93.750	Poecilia_mexicana
ENSODEG00000019419	-	100	93.750	ENSPREG00000023235	lsm6	100	93.750	Poecilia_reticulata
ENSODEG00000019419	-	100	96.250	ENSPPYG00000015105	LSM6	100	96.250	Pongo_abelii
ENSODEG00000019419	-	100	96.250	ENSPCOG00000013899	LSM6	100	96.250	Propithecus_coquereli
ENSODEG00000019419	-	100	93.750	ENSPNYG00000012614	lsm6	100	93.750	Pundamilia_nyererei
ENSODEG00000019419	-	100	95.000	ENSPNAG00000018779	lsm6	100	95.000	Pygocentrus_nattereri
ENSODEG00000019419	-	100	96.250	ENSRNOG00000049370	LOC100360750	100	96.250	Rattus_norvegicus
ENSODEG00000019419	-	100	96.250	ENSRNOG00000030374	Lsm6	100	96.250	Rattus_norvegicus
ENSODEG00000019419	-	100	96.250	ENSRBIG00000027878	LSM6	100	96.250	Rhinopithecus_bieti
ENSODEG00000019419	-	100	96.250	ENSRROG00000024868	LSM6	100	96.250	Rhinopithecus_roxellana
ENSODEG00000019419	-	94	40.506	YDR378C	-	92	44.304	Saccharomyces_cerevisiae
ENSODEG00000019419	-	100	70.000	ENSSBOG00000028103	-	100	70.000	Saimiri_boliviensis_boliviensis
ENSODEG00000019419	-	100	96.250	ENSSBOG00000021229	-	100	96.250	Saimiri_boliviensis_boliviensis
ENSODEG00000019419	-	100	95.000	ENSSFOG00015016480	lsm6	100	95.000	Scleropages_formosus
ENSODEG00000019419	-	100	93.750	ENSSMAG00000004550	lsm6	100	93.750	Scophthalmus_maximus
ENSODEG00000019419	-	100	93.750	ENSSDUG00000020459	lsm6	50	93.750	Seriola_dumerili
ENSODEG00000019419	-	100	93.750	ENSSLDG00000020533	lsm6	83	93.750	Seriola_lalandi_dorsalis
ENSODEG00000019419	-	86	95.652	ENSSLDG00000004136	-	59	95.652	Seriola_lalandi_dorsalis
ENSODEG00000019419	-	60	95.833	ENSSARG00000000689	LSM6	100	95.833	Sorex_araneus
ENSODEG00000019419	-	100	96.250	ENSSPUG00000008657	LSM6	100	96.250	Sphenodon_punctatus
ENSODEG00000019419	-	100	93.750	ENSSPAG00000003246	lsm6	100	93.750	Stegastes_partitus
ENSODEG00000019419	-	100	96.250	ENSSSCG00000035973	LSM6	100	96.250	Sus_scrofa
ENSODEG00000019419	-	100	96.250	ENSTGUG00000002663	LSM6	100	96.250	Taeniopygia_guttata
ENSODEG00000019419	-	100	93.750	ENSTRUG00000023398	lsm6	100	93.750	Takifugu_rubripes
ENSODEG00000019419	-	100	93.750	ENSTNIG00000017725	lsm6	100	93.750	Tetraodon_nigroviridis
ENSODEG00000019419	-	100	96.250	ENSTTRG00000004609	LSM6	100	96.250	Tursiops_truncatus
ENSODEG00000019419	-	98	89.744	ENSUAMG00000014213	LSM6	64	89.744	Ursus_americanus
ENSODEG00000019419	-	98	89.744	ENSUMAG00000015727	LSM6	64	89.744	Ursus_maritimus
ENSODEG00000019419	-	100	96.250	ENSVPAG00000006922	LSM6	100	96.250	Vicugna_pacos
ENSODEG00000019419	-	100	96.250	ENSVVUG00000009254	LSM6	68	96.250	Vulpes_vulpes
ENSODEG00000019419	-	100	96.250	ENSXETG00000023683	lsm6	100	96.250	Xenopus_tropicalis
ENSODEG00000019419	-	100	93.750	ENSXMAG00000009606	lsm6	100	93.750	Xiphophorus_maculatus