EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019473 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 234 bases
Position: chrJH651537.1:10700896-10701129
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026102	PWI	PF01480.17	2.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026538	-	234	-	ENSODEP00000026102	78 (aa)	-	-

Gene Model

Click here to download ENSODEG00000019473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019473	-	91	94.366	ENSODEG00000007221	-	97	90.667
ENSODEG00000019473	-	100	87.179	ENSODEG00000002361	-	100	87.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019473	-	100	96.154	ENSG00000133226	SRRM1	99	96.154	Homo_sapiens
ENSODEG00000019473	-	100	91.026	ENSAMXG00000040320	-	73	91.026	Astyanax_mexicanus
ENSODEG00000019473	-	97	94.737	ENSCHIG00000021159	-	54	94.737	Capra_hircus
ENSODEG00000019473	-	100	89.744	ENSCVAG00000000504	-	67	89.744	Cyprinodon_variegatus
ENSODEG00000019473	-	100	79.487	ENSFCAG00000044640	-	71	79.487	Felis_catus
ENSODEG00000019473	-	94	93.151	ENSFALG00000000476	SRRM1	100	95.775	Ficedula_albicollis
ENSODEG00000019473	-	100	89.744	ENSFHEG00000007359	-	80	89.744	Fundulus_heteroclitus
ENSODEG00000019473	-	100	96.154	ENSGALG00000001283	SRRM1	99	96.154	Gallus_gallus
ENSODEG00000019473	-	100	91.026	ENSHBUG00000020354	-	99	91.026	Haplochromis_burtoni
ENSODEG00000019473	-	100	75.641	ENSHGLG00100010430	-	96	75.641	Heterocephalus_glaber_male
ENSODEG00000019473	-	100	80.769	ENSHGLG00100017918	-	54	70.513	Heterocephalus_glaber_male
ENSODEG00000019473	-	100	91.026	ENSKMAG00000013810	-	87	91.026	Kryptolebias_marmoratus
ENSODEG00000019473	-	100	91.026	ENSMMOG00000002390	-	77	91.026	Mola_mola
ENSODEG00000019473	-	100	96.154	MGP_CAROLIEiJ_G0026636	Srrm1	51	95.775	Mus_caroli
ENSODEG00000019473	-	100	96.154	ENSMUSG00000028809	Srrm1	51	95.775	Mus_musculus
ENSODEG00000019473	-	100	96.154	MGP_PahariEiJ_G0028969	Srrm1	51	95.775	Mus_pahari
ENSODEG00000019473	-	100	96.154	MGP_SPRETEiJ_G0027616	Srrm1	51	95.775	Mus_spretus
ENSODEG00000019473	-	100	91.026	ENSORLG00020018419	-	99	91.026	Oryzias_latipes_hni
ENSODEG00000019473	-	91	84.507	ENSPTIG00000022093	-	70	84.507	Panthera_tigris_altaica
ENSODEG00000019473	-	100	91.026	ENSPMGG00000009036	-	73	91.026	Periophthalmus_magnuspinnatus
ENSODEG00000019473	-	100	91.026	ENSPMEG00000002615	-	99	91.026	Poecilia_mexicana
ENSODEG00000019473	-	100	91.026	ENSPMEG00000011776	-	99	91.026	Poecilia_mexicana
ENSODEG00000019473	-	100	89.744	ENSPNAG00000005888	-	75	89.744	Pygocentrus_nattereri
ENSODEG00000019473	-	100	96.154	ENSSBOG00000019884	SRRM1	99	96.154	Saimiri_boliviensis_boliviensis
ENSODEG00000019473	-	91	95.775	ENSTGUG00000016669	-	99	95.775	Taeniopygia_guttata
ENSODEG00000019473	-	100	96.154	ENSUAMG00000011740	-	87	96.154	Ursus_americanus