EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019480 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 60S acidic ribosomal protein P1 pseudogene
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 345 bases
Position: chrJH651595.1:6522450-6522794
Accession: 101559963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026108	Ribosomal_60s	PF00428.19	9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026545	-	345	XM_004636438	ENSODEP00000026108	114 (aa)	XP_004636495	UPI0003337DE6

Gene Model

Click here to download ENSODEG00000019480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019480	-	100	95.614	ENSODEG00000019050	-	100	95.614
ENSODEG00000019480	-	99	86.726	ENSODEG00000003023	-	99	86.726
ENSODEG00000019480	-	100	94.737	ENSODEG00000019438	-	100	94.737
ENSODEG00000019480	-	100	79.825	ENSODEG00000003864	-	100	79.825
ENSODEG00000019480	-	100	97.368	ENSODEG00000015331	-	100	97.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019480	-	100	66.667	ENSAMEG00000004140	-	100	66.667	Ailuropoda_melanoleuca
ENSODEG00000019480	-	100	66.667	ENSANAG00000024227	-	100	66.667	Aotus_nancymaae
ENSODEG00000019480	-	100	96.491	ENSBTAG00000039728	-	100	96.491	Bos_taurus
ENSODEG00000019480	-	100	85.088	ENSCAFG00000017038	-	100	85.088	Canis_familiaris
ENSODEG00000019480	-	100	65.789	ENSCAFG00000016073	-	100	65.789	Canis_familiaris
ENSODEG00000019480	-	100	85.088	ENSCAFG00020002090	-	100	85.088	Canis_lupus_dingo
ENSODEG00000019480	-	100	63.158	ENSCHIG00000021994	-	98	51.786	Capra_hircus
ENSODEG00000019480	-	98	65.179	ENSCHIG00000011615	-	99	56.250	Capra_hircus
ENSODEG00000019480	-	81	90.217	ENSTSYG00000013927	-	88	90.217	Carlito_syrichta
ENSODEG00000019480	-	95	56.757	ENSCPOG00000032847	-	61	70.000	Cavia_porcellus
ENSODEG00000019480	-	100	73.684	ENSCLAG00000017688	-	100	58.772	Chinchilla_lanigera
ENSODEG00000019480	-	100	92.105	ENSCGRG00000020045	-	100	92.105	Cricetulus_griseus_crigri
ENSODEG00000019480	-	99	65.217	ENSDNOG00000038952	-	57	72.308	Dasypus_novemcinctus
ENSODEG00000019480	-	83	83.333	ENSEASG00005008178	-	58	84.375	Equus_asinus_asinus
ENSODEG00000019480	-	77	84.270	ENSECAG00000008501	-	51	84.375	Equus_caballus
ENSODEG00000019480	-	55	77.778	ENSFCAG00000033316	-	63	77.778	Felis_catus
ENSODEG00000019480	-	100	74.561	ENSGGOG00000026958	-	100	74.561	Gorilla_gorilla
ENSODEG00000019480	-	100	85.088	ENSJJAG00000002328	-	100	85.088	Jaculus_jaculus
ENSODEG00000019480	-	99	77.876	ENSLAFG00000032714	-	100	62.281	Loxodonta_africana
ENSODEG00000019480	-	100	63.158	ENSLAFG00000012585	-	100	64.912	Loxodonta_africana
ENSODEG00000019480	-	100	93.860	ENSMMUG00000029973	-	100	93.860	Macaca_mulatta
ENSODEG00000019480	-	99	69.912	ENSMICG00000033389	-	66	82.540	Microcebus_murinus
ENSODEG00000019480	-	98	73.684	ENSMODG00000023165	-	98	73.684	Monodelphis_domestica
ENSODEG00000019480	-	100	61.404	ENSMLUG00000022568	-	65	67.742	Myotis_lucifugus
ENSODEG00000019480	-	100	77.193	ENSNLEG00000036070	-	100	77.193	Nomascus_leucogenys
ENSODEG00000019480	-	79	70.652	ENSMEUG00000015282	-	100	70.652	Notamacropus_eugenii
ENSODEG00000019480	-	99	75.221	ENSPPAG00000034828	-	100	75.221	Pan_paniscus
ENSODEG00000019480	-	99	76.106	ENSPTRG00000046428	-	100	76.106	Pan_troglodytes
ENSODEG00000019480	-	98	66.372	ENSPCIG00000018547	-	97	71.171	Phascolarctos_cinereus
ENSODEG00000019480	-	54	75.410	ENSSSCG00000028362	-	58	75.410	Sus_scrofa
ENSODEG00000019480	-	99	86.726	ENSSSCG00000009677	-	91	86.726	Sus_scrofa