EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019513 (Gene tree)
Gene ID: 101568617
Gene Symbol: -
Alias: -
Full Name: exosome complex component RRP4
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 765 bases
Position: chrJH651646.1:4524195-4524959
Accession: 101568617
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026136	ECR1_N	PF14382.6	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026578	-	765	XM_012516906	ENSODEP00000026136	254 (aa)	XP_012372360	UPI00062A541F

Gene Model

Click here to download ENSODEG00000019513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019513	-	100	96.457	ENSODEG00000016880	-	86	96.457

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019513	-	100	93.701	ENSG00000130713	EXOSC2	87	93.701	Homo_sapiens
ENSODEG00000019513	-	99	78.968	ENSAPOG00000008861	exosc2	92	78.968	Acanthochromis_polyacanthus
ENSODEG00000019513	-	100	93.701	ENSAMEG00000016239	EXOSC2	87	93.701	Ailuropoda_melanoleuca
ENSODEG00000019513	-	100	79.134	ENSACIG00000019054	exosc2	87	79.134	Amphilophus_citrinellus
ENSODEG00000019513	-	100	79.528	ENSAOCG00000008577	exosc2	87	79.528	Amphiprion_ocellaris
ENSODEG00000019513	-	100	79.528	ENSAOCG00000004983	exosc2	87	79.528	Amphiprion_ocellaris
ENSODEG00000019513	-	100	79.528	ENSAPEG00000014088	exosc2	87	79.528	Amphiprion_percula
ENSODEG00000019513	-	100	79.528	ENSATEG00000018680	exosc2	87	79.528	Anabas_testudineus
ENSODEG00000019513	-	99	88.933	ENSAPLG00000012516	EXOSC2	87	88.933	Anas_platyrhynchos
ENSODEG00000019513	-	100	88.976	ENSACAG00000002706	EXOSC2	87	88.976	Anolis_carolinensis
ENSODEG00000019513	-	100	78.346	ENSACLG00000013613	exosc2	87	78.346	Astatotilapia_calliptera
ENSODEG00000019513	-	100	81.496	ENSAMXG00000042605	exosc2	86	81.496	Astyanax_mexicanus
ENSODEG00000019513	-	100	94.094	ENSBTAG00000048071	EXOSC2	87	94.094	Bos_taurus
ENSODEG00000019513	-	99	45.059	WBGene00022232	exos-2	83	45.059	Caenorhabditis_elegans
ENSODEG00000019513	-	100	93.701	ENSCJAG00000020537	EXOSC2	87	93.701	Callithrix_jacchus
ENSODEG00000019513	-	99	92.885	ENSCAFG00000019941	EXOSC2	86	92.885	Canis_familiaris
ENSODEG00000019513	-	100	92.913	ENSCAFG00020024047	EXOSC2	87	92.913	Canis_lupus_dingo
ENSODEG00000019513	-	100	94.094	ENSCHIG00000021398	EXOSC2	87	94.094	Capra_hircus
ENSODEG00000019513	-	100	94.094	ENSTSYG00000001805	EXOSC2	87	94.094	Carlito_syrichta
ENSODEG00000019513	-	100	96.850	ENSCPOG00000005902	EXOSC2	87	96.850	Cavia_porcellus
ENSODEG00000019513	-	100	93.701	ENSCCAG00000019749	EXOSC2	87	93.701	Cebus_capucinus
ENSODEG00000019513	-	100	94.094	ENSCATG00000025389	-	87	94.094	Cercocebus_atys
ENSODEG00000019513	-	100	96.457	ENSCLAG00000006195	EXOSC2	87	96.457	Chinchilla_lanigera
ENSODEG00000019513	-	100	94.094	ENSCSAG00000014760	EXOSC2	87	94.094	Chlorocebus_sabaeus
ENSODEG00000019513	-	99	93.651	ENSCHOG00000000858	EXOSC2	86	93.651	Choloepus_hoffmanni
ENSODEG00000019513	-	100	88.976	ENSCPBG00000022626	EXOSC2	86	88.976	Chrysemys_picta_bellii
ENSODEG00000019513	-	96	63.200	ENSCING00000014934	-	83	63.200	Ciona_intestinalis
ENSODEG00000019513	-	92	66.387	ENSCSAVG00000003684	-	87	66.387	Ciona_savignyi
ENSODEG00000019513	-	100	94.094	ENSCANG00000039828	-	87	94.094	Colobus_angolensis_palliatus
ENSODEG00000019513	-	100	85.827	ENSCANG00000029298	-	86	85.827	Colobus_angolensis_palliatus
ENSODEG00000019513	-	100	94.488	ENSCGRG00001013981	Exosc2	87	94.488	Cricetulus_griseus_chok1gshd
ENSODEG00000019513	-	100	94.488	ENSCGRG00000017629	Exosc2	87	94.488	Cricetulus_griseus_crigri
ENSODEG00000019513	-	100	78.740	ENSCSEG00000016539	exosc2	87	78.740	Cynoglossus_semilaevis
ENSODEG00000019513	-	100	78.346	ENSCVAG00000022260	exosc2	87	78.346	Cyprinodon_variegatus
ENSODEG00000019513	-	100	79.528	ENSDARG00000028688	exosc2	86	79.528	Danio_rerio
ENSODEG00000019513	-	90	94.298	ENSDNOG00000025767	-	85	94.298	Dasypus_novemcinctus
ENSODEG00000019513	-	100	93.701	ENSDORG00000009238	Exosc2	87	93.701	Dipodomys_ordii
ENSODEG00000019513	-	98	59.761	FBgn0034879	Rrp4	84	60.159	Drosophila_melanogaster
ENSODEG00000019513	-	100	77.165	ENSETEG00000016130	-	92	77.165	Echinops_telfairi
ENSODEG00000019513	-	100	94.882	ENSEASG00005008475	EXOSC2	75	94.882	Equus_asinus_asinus
ENSODEG00000019513	-	100	94.882	ENSECAG00000007897	EXOSC2	75	94.882	Equus_caballus
ENSODEG00000019513	-	100	80.709	ENSELUG00000013641	exosc2	86	80.709	Esox_lucius
ENSODEG00000019513	-	100	93.307	ENSFCAG00000025936	EXOSC2	87	93.307	Felis_catus
ENSODEG00000019513	-	100	84.646	ENSFALG00000001446	EXOSC2	86	84.646	Ficedula_albicollis
ENSODEG00000019513	-	100	94.488	ENSFDAG00000017196	EXOSC2	87	94.488	Fukomys_damarensis
ENSODEG00000019513	-	100	79.134	ENSFHEG00000018571	exosc2	87	79.134	Fundulus_heteroclitus
ENSODEG00000019513	-	98	76.000	ENSGMOG00000011785	exosc2	86	76.000	Gadus_morhua
ENSODEG00000019513	-	100	88.189	ENSGALG00000040373	EXOSC2	86	88.189	Gallus_gallus
ENSODEG00000019513	-	99	78.261	ENSGAFG00000010283	exosc2	86	78.261	Gambusia_affinis
ENSODEG00000019513	-	100	77.559	ENSGACG00000016805	exosc2	86	77.559	Gasterosteus_aculeatus
ENSODEG00000019513	-	99	88.933	ENSGAGG00000021026	EXOSC2	95	88.933	Gopherus_agassizii
ENSODEG00000019513	-	100	92.913	ENSGGOG00000010578	EXOSC2	87	92.913	Gorilla_gorilla
ENSODEG00000019513	-	100	78.740	ENSHBUG00000022437	exosc2	87	78.740	Haplochromis_burtoni
ENSODEG00000019513	-	100	96.063	ENSHGLG00000012834	EXOSC2	87	96.063	Heterocephalus_glaber_female
ENSODEG00000019513	-	100	96.063	ENSHGLG00100007092	EXOSC2	87	96.063	Heterocephalus_glaber_male
ENSODEG00000019513	-	100	77.559	ENSHCOG00000019130	exosc2	87	77.559	Hippocampus_comes
ENSODEG00000019513	-	100	80.709	ENSIPUG00000015397	exosc2	86	80.709	Ictalurus_punctatus
ENSODEG00000019513	-	100	94.882	ENSSTOG00000005999	EXOSC2	87	94.882	Ictidomys_tridecemlineatus
ENSODEG00000019513	-	100	94.882	ENSJJAG00000003188	Exosc2	87	94.882	Jaculus_jaculus
ENSODEG00000019513	-	99	78.656	ENSKMAG00000017397	exosc2	87	78.656	Kryptolebias_marmoratus
ENSODEG00000019513	-	100	77.559	ENSLBEG00000019269	exosc2	87	77.559	Labrus_bergylta
ENSODEG00000019513	-	100	83.465	ENSLACG00000015530	EXOSC2	86	83.465	Latimeria_chalumnae
ENSODEG00000019513	-	99	93.676	ENSLAFG00000006984	EXOSC2	86	93.676	Loxodonta_africana
ENSODEG00000019513	-	100	94.094	ENSMFAG00000000597	-	87	94.094	Macaca_fascicularis
ENSODEG00000019513	-	100	79.528	ENSMFAG00000034160	-	72	79.528	Macaca_fascicularis
ENSODEG00000019513	-	100	90.945	ENSMMUG00000012498	EXOSC2	86	90.945	Macaca_mulatta
ENSODEG00000019513	-	100	94.094	ENSMNEG00000031861	-	87	94.094	Macaca_nemestrina
ENSODEG00000019513	-	100	79.921	ENSMNEG00000028704	-	78	79.921	Macaca_nemestrina
ENSODEG00000019513	-	100	94.094	ENSMLEG00000042587	-	87	94.094	Mandrillus_leucophaeus
ENSODEG00000019513	-	100	79.921	ENSMLEG00000029891	-	78	79.921	Mandrillus_leucophaeus
ENSODEG00000019513	-	100	79.134	ENSMAMG00000012466	exosc2	93	79.051	Mastacembelus_armatus
ENSODEG00000019513	-	100	77.953	ENSMZEG00005018737	exosc2	87	77.953	Maylandia_zebra
ENSODEG00000019513	-	100	87.402	ENSMGAG00000005450	EXOSC2	86	87.402	Meleagris_gallopavo
ENSODEG00000019513	-	100	94.094	ENSMAUG00000008299	Exosc2	87	94.094	Mesocricetus_auratus
ENSODEG00000019513	-	100	94.488	ENSMICG00000015495	EXOSC2	87	94.488	Microcebus_murinus
ENSODEG00000019513	-	100	94.882	ENSMOCG00000008262	Exosc2	87	94.882	Microtus_ochrogaster
ENSODEG00000019513	-	100	79.134	ENSMMOG00000009616	exosc2	87	79.134	Mola_mola
ENSODEG00000019513	-	100	90.157	ENSMODG00000012114	EXOSC2	87	90.157	Monodelphis_domestica
ENSODEG00000019513	-	100	79.528	ENSMALG00000022132	exosc2	87	79.528	Monopterus_albus
ENSODEG00000019513	-	100	94.094	MGP_CAROLIEiJ_G0023415	Exosc2	87	94.094	Mus_caroli
ENSODEG00000019513	-	100	94.094	ENSMUSG00000039356	Exosc2	87	94.094	Mus_musculus
ENSODEG00000019513	-	100	93.701	MGP_PahariEiJ_G0024872	Exosc2	87	93.701	Mus_pahari
ENSODEG00000019513	-	100	94.094	MGP_SPRETEiJ_G0024332	Exosc2	87	94.094	Mus_spretus
ENSODEG00000019513	-	100	92.913	ENSMPUG00000012686	EXOSC2	87	92.913	Mustela_putorius_furo
ENSODEG00000019513	-	99	94.862	ENSMLUG00000008776	EXOSC2	86	94.862	Myotis_lucifugus
ENSODEG00000019513	-	100	94.882	ENSNGAG00000019383	Exosc2	87	94.882	Nannospalax_galili
ENSODEG00000019513	-	100	78.346	ENSNBRG00000005453	exosc2	87	78.346	Neolamprologus_brichardi
ENSODEG00000019513	-	100	93.701	ENSNLEG00000012533	EXOSC2	87	93.701	Nomascus_leucogenys
ENSODEG00000019513	-	100	68.110	ENSMEUG00000000795	EXOSC2	87	68.110	Notamacropus_eugenii
ENSODEG00000019513	-	60	96.825	ENSOPRG00000008688	EXOSC2	52	96.825	Ochotona_princeps
ENSODEG00000019513	-	100	78.346	ENSONIG00000014086	exosc2	87	78.346	Oreochromis_niloticus
ENSODEG00000019513	-	100	88.583	ENSOANG00000001044	EXOSC2	87	88.583	Ornithorhynchus_anatinus
ENSODEG00000019513	-	100	94.094	ENSOCUG00000007138	EXOSC2	87	94.094	Oryctolagus_cuniculus
ENSODEG00000019513	-	100	79.528	ENSORLG00000007443	exosc2	87	79.528	Oryzias_latipes
ENSODEG00000019513	-	100	79.134	ENSORLG00020018902	exosc2	87	79.134	Oryzias_latipes_hni
ENSODEG00000019513	-	100	79.528	ENSORLG00015006767	exosc2	87	79.528	Oryzias_latipes_hsok
ENSODEG00000019513	-	100	78.346	ENSOMEG00000003533	exosc2	87	78.346	Oryzias_melastigma
ENSODEG00000019513	-	100	94.094	ENSOGAG00000007558	EXOSC2	87	94.094	Otolemur_garnettii
ENSODEG00000019513	-	99	93.676	ENSOARG00000007438	EXOSC2	86	93.676	Ovis_aries
ENSODEG00000019513	-	100	93.701	ENSPPAG00000034796	EXOSC2	87	93.701	Pan_paniscus
ENSODEG00000019513	-	100	93.701	ENSPPRG00000001089	EXOSC2	87	93.701	Panthera_pardus
ENSODEG00000019513	-	100	93.701	ENSPTIG00000021163	EXOSC2	87	93.701	Panthera_tigris_altaica
ENSODEG00000019513	-	100	93.701	ENSPTRG00000045766	-	87	93.701	Pan_troglodytes
ENSODEG00000019513	-	100	93.701	ENSPTRG00000021476	EXOSC2	87	93.701	Pan_troglodytes
ENSODEG00000019513	-	100	94.094	ENSPANG00000025966	EXOSC2	87	94.094	Papio_anubis
ENSODEG00000019513	-	100	79.921	ENSPKIG00000004271	exosc2	87	79.921	Paramormyrops_kingsleyae
ENSODEG00000019513	-	100	89.764	ENSPSIG00000006743	EXOSC2	86	89.764	Pelodiscus_sinensis
ENSODEG00000019513	-	99	77.866	ENSPMGG00000010980	exosc2	99	77.866	Periophthalmus_magnuspinnatus
ENSODEG00000019513	-	100	94.094	ENSPEMG00000006345	Exosc2	87	94.094	Peromyscus_maniculatus_bairdii
ENSODEG00000019513	-	100	82.283	ENSPMAG00000001280	exosc2	86	82.283	Petromyzon_marinus
ENSODEG00000019513	-	100	90.551	ENSPCIG00000024122	EXOSC2	84	90.551	Phascolarctos_cinereus
ENSODEG00000019513	-	99	78.346	ENSPFOG00000019819	exosc2	86	78.346	Poecilia_formosa
ENSODEG00000019513	-	99	78.656	ENSPLAG00000004605	exosc2	86	78.656	Poecilia_latipinna
ENSODEG00000019513	-	99	78.656	ENSPMEG00000010976	exosc2	86	78.656	Poecilia_mexicana
ENSODEG00000019513	-	99	78.261	ENSPREG00000014306	exosc2	86	78.261	Poecilia_reticulata
ENSODEG00000019513	-	100	93.307	ENSPPYG00000019695	EXOSC2	87	93.307	Pongo_abelii
ENSODEG00000019513	-	100	93.701	ENSPCAG00000013400	EXOSC2	87	93.701	Procavia_capensis
ENSODEG00000019513	-	100	94.488	ENSPCOG00000017639	EXOSC2	87	94.488	Propithecus_coquereli
ENSODEG00000019513	-	100	92.520	ENSPVAG00000001513	EXOSC2	87	92.520	Pteropus_vampyrus
ENSODEG00000019513	-	100	78.740	ENSPNYG00000007383	exosc2	87	78.740	Pundamilia_nyererei
ENSODEG00000019513	-	100	80.709	ENSPNAG00000014281	exosc2	86	80.709	Pygocentrus_nattereri
ENSODEG00000019513	-	100	93.701	ENSRNOG00000009245	Exosc2	87	93.701	Rattus_norvegicus
ENSODEG00000019513	-	100	86.220	ENSRBIG00000029791	-	86	86.220	Rhinopithecus_bieti
ENSODEG00000019513	-	100	93.701	ENSRBIG00000031203	-	87	93.701	Rhinopithecus_bieti
ENSODEG00000019513	-	100	84.646	ENSRROG00000043609	-	86	84.646	Rhinopithecus_roxellana
ENSODEG00000019513	-	100	93.701	ENSRROG00000010827	-	87	93.701	Rhinopithecus_roxellana
ENSODEG00000019513	-	95	42.238	YHR069C	-	77	42.238	Saccharomyces_cerevisiae
ENSODEG00000019513	-	100	93.701	ENSSBOG00000022712	EXOSC2	87	93.701	Saimiri_boliviensis_boliviensis
ENSODEG00000019513	-	100	89.370	ENSSHAG00000016050	EXOSC2	87	89.370	Sarcophilus_harrisii
ENSODEG00000019513	-	100	79.528	ENSSFOG00015011245	exosc2	87	79.528	Scleropages_formosus
ENSODEG00000019513	-	100	77.953	ENSSMAG00000003112	exosc2	87	77.953	Scophthalmus_maximus
ENSODEG00000019513	-	100	77.432	ENSSDUG00000004634	exosc2	87	77.432	Seriola_dumerili
ENSODEG00000019513	-	100	78.346	ENSSLDG00000010616	exosc2	87	78.346	Seriola_lalandi_dorsalis
ENSODEG00000019513	-	100	88.976	ENSSPUG00000013391	EXOSC2	86	88.976	Sphenodon_punctatus
ENSODEG00000019513	-	100	78.740	ENSSPAG00000022947	exosc2	87	78.740	Stegastes_partitus
ENSODEG00000019513	-	100	94.488	ENSSSCG00000005704	EXOSC2	87	94.488	Sus_scrofa
ENSODEG00000019513	-	100	83.858	ENSTGUG00000004697	EXOSC2	86	83.858	Taeniopygia_guttata
ENSODEG00000019513	-	100	74.409	ENSTRUG00000022436	exosc2	86	74.409	Takifugu_rubripes
ENSODEG00000019513	-	100	86.220	ENSTTRG00000015159	EXOSC2	87	86.220	Tursiops_truncatus
ENSODEG00000019513	-	94	91.176	ENSUAMG00000009651	EXOSC2	85	91.176	Ursus_americanus
ENSODEG00000019513	-	100	93.701	ENSUMAG00000018726	EXOSC2	87	93.701	Ursus_maritimus
ENSODEG00000019513	-	100	92.913	ENSVVUG00000027665	EXOSC2	87	92.913	Vulpes_vulpes
ENSODEG00000019513	-	100	78.740	ENSXETG00000001340	exosc2	87	78.740	Xenopus_tropicalis
ENSODEG00000019513	-	99	78.656	ENSXMAG00000005265	exosc2	86	78.656	Xiphophorus_maculatus