EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019541 (Gene tree)
Gene ID: 101593336
Gene Symbol: -
Alias: -
Full Name: 28S ribosomal protein S16%2C mitochondrial
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 408 bases
Position: chrJH651595.1:6497596-6498003
Accession: 101593336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026161	Ribosomal_S16	PF00886.19	4.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026606	-	408	XM_004636437	ENSODEP00000026161	135 (aa)	XP_004636494	UPI000333FE81

Gene Model

Click here to download ENSODEG00000019541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019541	-	55	100.000	ENSODEG00000013980	-	93	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019541	-	100	90.370	ENSG00000182180	MRPS16	99	90.370	Homo_sapiens
ENSODEG00000019541	-	82	65.487	ENSAPOG00000012117	mrps16	82	65.487	Acanthochromis_polyacanthus
ENSODEG00000019541	-	97	87.023	ENSAMEG00000016931	MRPS16	92	89.167	Ailuropoda_melanoleuca
ENSODEG00000019541	-	100	59.124	ENSACIG00000008004	mrps16	87	63.866	Amphilophus_citrinellus
ENSODEG00000019541	-	82	66.372	ENSAOCG00000006801	mrps16	82	66.372	Amphiprion_ocellaris
ENSODEG00000019541	-	82	65.487	ENSAPEG00000004562	mrps16	82	65.487	Amphiprion_percula
ENSODEG00000019541	-	97	60.902	ENSATEG00000024962	mrps16	85	65.254	Anabas_testudineus
ENSODEG00000019541	-	100	88.148	ENSANAG00000036208	MRPS16	99	88.148	Aotus_nancymaae
ENSODEG00000019541	-	81	65.766	ENSACLG00000016154	mrps16	81	65.766	Astatotilapia_calliptera
ENSODEG00000019541	-	81	70.642	ENSAMXG00000040279	mrps16	89	66.667	Astyanax_mexicanus
ENSODEG00000019541	-	81	65.455	ENSBTAG00000053412	-	100	65.455	Bos_taurus
ENSODEG00000019541	-	100	86.667	ENSBTAG00000000950	MRPS16	92	89.516	Bos_taurus
ENSODEG00000019541	-	81	46.018	WBGene00018961	mrps-16	73	46.018	Caenorhabditis_elegans
ENSODEG00000019541	-	100	87.407	ENSCJAG00000007538	MRPS16	99	87.407	Callithrix_jacchus
ENSODEG00000019541	-	99	58.209	ENSCAFG00000008928	-	90	60.163	Canis_familiaris
ENSODEG00000019541	-	100	86.667	ENSCAFG00000031286	-	62	88.710	Canis_familiaris
ENSODEG00000019541	-	81	85.455	ENSCAFG00020025503	-	87	85.455	Canis_lupus_dingo
ENSODEG00000019541	-	99	84.211	ENSCAFG00020023773	-	90	86.066	Canis_lupus_dingo
ENSODEG00000019541	-	98	59.398	ENSCHIG00000016255	-	86	61.864	Capra_hircus
ENSODEG00000019541	-	100	88.889	ENSTSYG00000034400	-	100	88.889	Carlito_syrichta
ENSODEG00000019541	-	99	65.672	ENSTSYG00000014457	-	100	65.672	Carlito_syrichta
ENSODEG00000019541	-	97	67.939	ENSTSYG00000026797	-	89	68.548	Carlito_syrichta
ENSODEG00000019541	-	98	66.667	ENSTSYG00000036920	-	91	66.935	Carlito_syrichta
ENSODEG00000019541	-	96	82.308	ENSCAPG00000015053	MRPS16	100	82.308	Cavia_aperea
ENSODEG00000019541	-	100	94.074	ENSCPOG00000025500	MRPS16	100	94.074	Cavia_porcellus
ENSODEG00000019541	-	100	86.667	ENSCCAG00000037051	MRPS16	95	91.398	Cebus_capucinus
ENSODEG00000019541	-	100	85.185	ENSCATG00000040457	MRPS16	99	85.185	Cercocebus_atys
ENSODEG00000019541	-	100	93.333	ENSCLAG00000010443	MRPS16	92	94.355	Chinchilla_lanigera
ENSODEG00000019541	-	100	85.185	ENSCSAG00000000413	-	99	85.185	Chlorocebus_sabaeus
ENSODEG00000019541	-	100	84.444	ENSCSAG00000018976	-	99	84.444	Chlorocebus_sabaeus
ENSODEG00000019541	-	100	84.444	ENSCSAG00000018977	-	99	84.444	Chlorocebus_sabaeus
ENSODEG00000019541	-	99	85.714	ENSCHOG00000012520	MRPS16	93	87.097	Choloepus_hoffmanni
ENSODEG00000019541	-	92	66.935	ENSCPBG00000022282	MRPS16	96	66.935	Chrysemys_picta_bellii
ENSODEG00000019541	-	72	55.670	ENSCING00000024826	-	57	55.102	Ciona_intestinalis
ENSODEG00000019541	-	86	46.552	ENSCSAVG00000006333	-	56	51.546	Ciona_savignyi
ENSODEG00000019541	-	100	86.667	ENSCANG00000010568	MRPS16	99	86.667	Colobus_angolensis_palliatus
ENSODEG00000019541	-	100	88.148	ENSCGRG00001023386	Mrps16	100	88.148	Cricetulus_griseus_chok1gshd
ENSODEG00000019541	-	100	88.148	ENSCGRG00000002182	Mrps16	100	88.148	Cricetulus_griseus_crigri
ENSODEG00000019541	-	99	58.519	ENSCSEG00000021662	mrps16	84	64.602	Cynoglossus_semilaevis
ENSODEG00000019541	-	82	62.832	ENSCVAG00000012001	mrps16	87	61.864	Cyprinodon_variegatus
ENSODEG00000019541	-	95	65.625	ENSDARG00000098972	mrps16	90	71.552	Danio_rerio
ENSODEG00000019541	-	92	91.935	ENSDNOG00000047675	MRPS16	91	91.935	Dasypus_novemcinctus
ENSODEG00000019541	-	100	88.148	ENSDORG00000008275	-	92	91.129	Dipodomys_ordii
ENSODEG00000019541	-	67	75.824	ENSDORG00000023262	-	97	75.824	Dipodomys_ordii
ENSODEG00000019541	-	81	50.909	FBgn0033907	mRpS16	85	50.909	Drosophila_melanogaster
ENSODEG00000019541	-	74	57.000	ENSEBUG00000001088	mrps16	85	57.000	Eptatretus_burgeri
ENSODEG00000019541	-	93	90.400	ENSEASG00005017192	MRPS16	95	90.400	Equus_asinus_asinus
ENSODEG00000019541	-	93	90.400	ENSECAG00000009146	MRPS16	95	90.400	Equus_caballus
ENSODEG00000019541	-	82	63.717	ENSELUG00000011609	mrps16	85	63.717	Esox_lucius
ENSODEG00000019541	-	100	88.148	ENSFCAG00000037310	MRPS16	92	90.323	Felis_catus
ENSODEG00000019541	-	79	64.486	ENSFALG00000009917	MRPS16	82	65.789	Ficedula_albicollis
ENSODEG00000019541	-	93	96.032	ENSFDAG00000014014	MRPS16	91	95.968	Fukomys_damarensis
ENSODEG00000019541	-	99	57.037	ENSFHEG00000022624	mrps16	85	61.017	Fundulus_heteroclitus
ENSODEG00000019541	-	82	65.487	ENSGMOG00000001558	mrps16	88	65.487	Gadus_morhua
ENSODEG00000019541	-	80	73.148	ENSGALG00000050621	MRPS16	90	70.330	Gallus_gallus
ENSODEG00000019541	-	99	58.519	ENSGAFG00000012456	mrps16	85	62.712	Gambusia_affinis
ENSODEG00000019541	-	82	65.487	ENSGACG00000001715	mrps16	83	65.487	Gasterosteus_aculeatus
ENSODEG00000019541	-	93	46.825	ENSGAGG00000005030	-	92	46.667	Gopherus_agassizii
ENSODEG00000019541	-	92	70.968	ENSGAGG00000000097	-	87	70.968	Gopherus_agassizii
ENSODEG00000019541	-	100	90.370	ENSGGOG00000015055	MRPS16	99	90.370	Gorilla_gorilla
ENSODEG00000019541	-	81	66.667	ENSHBUG00000015492	mrps16	82	66.667	Haplochromis_burtoni
ENSODEG00000019541	-	100	93.333	ENSHGLG00000012797	MRPS16	100	93.333	Heterocephalus_glaber_female
ENSODEG00000019541	-	100	93.333	ENSHGLG00100007890	MRPS16	100	93.333	Heterocephalus_glaber_male
ENSODEG00000019541	-	78	62.617	ENSHCOG00000020173	mrps16	91	61.864	Hippocampus_comes
ENSODEG00000019541	-	81	69.725	ENSIPUG00000003397	mrps16	83	68.468	Ictalurus_punctatus
ENSODEG00000019541	-	100	89.630	ENSSTOG00000027184	MRPS16	100	89.630	Ictidomys_tridecemlineatus
ENSODEG00000019541	-	100	88.148	ENSJJAG00000023255	Mrps16	93	89.516	Jaculus_jaculus
ENSODEG00000019541	-	100	55.474	ENSKMAG00000009755	mrps16	83	62.609	Kryptolebias_marmoratus
ENSODEG00000019541	-	100	55.474	ENSLBEG00000024661	mrps16	86	61.345	Labrus_bergylta
ENSODEG00000019541	-	85	70.435	ENSLACG00000019160	MRPS16	84	70.435	Latimeria_chalumnae
ENSODEG00000019541	-	85	69.565	ENSLOCG00000003927	mrps16	84	69.565	Lepisosteus_oculatus
ENSODEG00000019541	-	97	83.969	ENSLAFG00000023124	MRPS16	100	83.969	Loxodonta_africana
ENSODEG00000019541	-	100	85.185	ENSMFAG00000032103	MRPS16	99	85.185	Macaca_fascicularis
ENSODEG00000019541	-	69	87.097	ENSMMUG00000011284	MRPS16	94	87.097	Macaca_mulatta
ENSODEG00000019541	-	100	85.185	ENSMNEG00000041963	MRPS16	99	85.185	Macaca_nemestrina
ENSODEG00000019541	-	100	85.185	ENSMLEG00000044343	MRPS16	99	85.185	Mandrillus_leucophaeus
ENSODEG00000019541	-	100	59.124	ENSMAMG00000015181	mrps16	83	65.487	Mastacembelus_armatus
ENSODEG00000019541	-	80	70.642	ENSMGAG00000000893	MRPS16	86	71.186	Meleagris_gallopavo
ENSODEG00000019541	-	100	87.407	ENSMAUG00000010491	Mrps16	100	87.407	Mesocricetus_auratus
ENSODEG00000019541	-	100	88.889	ENSMICG00000042573	MRPS16	100	88.889	Microcebus_murinus
ENSODEG00000019541	-	100	86.667	ENSMOCG00000006927	Mrps16	100	86.667	Microtus_ochrogaster
ENSODEG00000019541	-	88	59.504	ENSMMOG00000010770	mrps16	88	59.504	Mola_mola
ENSODEG00000019541	-	97	70.229	ENSMODG00000000168	MRPS16	92	72.951	Monodelphis_domestica
ENSODEG00000019541	-	82	61.947	ENSMALG00000007222	mrps16	81	61.947	Monopterus_albus
ENSODEG00000019541	-	100	87.407	MGP_CAROLIEiJ_G0018987	Mrps16	100	87.407	Mus_caroli
ENSODEG00000019541	-	100	88.148	ENSMUSG00000049960	Mrps16	100	88.148	Mus_musculus
ENSODEG00000019541	-	92	88.710	MGP_PahariEiJ_G0030001	Mrps16	100	85.926	Mus_pahari
ENSODEG00000019541	-	100	86.667	MGP_SPRETEiJ_G0019865	Mrps16	100	86.667	Mus_spretus
ENSODEG00000019541	-	99	89.474	ENSMPUG00000003777	MRPS16	80	91.935	Mustela_putorius_furo
ENSODEG00000019541	-	92	87.903	ENSMLUG00000022951	MRPS16	100	87.407	Myotis_lucifugus
ENSODEG00000019541	-	99	86.667	ENSNGAG00000019881	Mrps16	91	87.903	Nannospalax_galili
ENSODEG00000019541	-	81	66.667	ENSNBRG00000020914	mrps16	81	66.667	Neolamprologus_brichardi
ENSODEG00000019541	-	100	68.148	ENSNLEG00000029922	-	88	69.355	Nomascus_leucogenys
ENSODEG00000019541	-	100	88.889	ENSNLEG00000018904	-	99	88.889	Nomascus_leucogenys
ENSODEG00000019541	-	100	90.370	ENSNLEG00000016597	-	99	90.370	Nomascus_leucogenys
ENSODEG00000019541	-	90	76.230	ENSMEUG00000008644	MRPS16	97	77.119	Notamacropus_eugenii
ENSODEG00000019541	-	97	84.733	ENSOPRG00000018616	MRPS16	95	87.903	Ochotona_princeps
ENSODEG00000019541	-	96	59.091	ENSONIG00000014282	mrps16	81	66.364	Oreochromis_niloticus
ENSODEG00000019541	-	100	69.630	ENSOANG00000012378	MRPS16	91	74.194	Ornithorhynchus_anatinus
ENSODEG00000019541	-	100	88.148	ENSOCUG00000023231	-	100	88.148	Oryctolagus_cuniculus
ENSODEG00000019541	-	100	84.444	ENSOCUG00000024223	-	100	84.444	Oryctolagus_cuniculus
ENSODEG00000019541	-	82	64.602	ENSORLG00000022084	mrps16	86	62.810	Oryzias_latipes
ENSODEG00000019541	-	82	63.717	ENSORLG00020019793	mrps16	86	61.983	Oryzias_latipes_hni
ENSODEG00000019541	-	82	64.602	ENSORLG00015015664	mrps16	82	64.602	Oryzias_latipes_hsok
ENSODEG00000019541	-	95	59.231	ENSOMEG00000021490	mrps16	89	61.290	Oryzias_melastigma
ENSODEG00000019541	-	100	86.667	ENSOGAG00000033867	MRPS16	99	86.667	Otolemur_garnettii
ENSODEG00000019541	-	99	88.722	ENSOARG00000007548	MRPS16	80	90.323	Ovis_aries
ENSODEG00000019541	-	100	90.370	ENSPPAG00000009406	MRPS16	99	90.370	Pan_paniscus
ENSODEG00000019541	-	100	88.148	ENSPPRG00000024759	MRPS16	92	90.323	Panthera_pardus
ENSODEG00000019541	-	100	88.148	ENSPTIG00000021428	MRPS16	92	90.323	Panthera_tigris_altaica
ENSODEG00000019541	-	100	90.370	ENSPTRG00000002627	MRPS16	99	90.370	Pan_troglodytes
ENSODEG00000019541	-	81	79.091	ENSPTRG00000044912	-	100	79.091	Pan_troglodytes
ENSODEG00000019541	-	100	84.444	ENSPANG00000022374	MRPS16	99	84.444	Papio_anubis
ENSODEG00000019541	-	100	62.963	ENSPKIG00000013816	mrps16	84	65.323	Paramormyrops_kingsleyae
ENSODEG00000019541	-	99	62.406	ENSPSIG00000005589	MRPS16	87	65.323	Pelodiscus_sinensis
ENSODEG00000019541	-	95	60.000	ENSPMGG00000013450	mrps16	97	61.905	Periophthalmus_magnuspinnatus
ENSODEG00000019541	-	100	87.407	ENSPEMG00000021378	Mrps16	91	91.057	Peromyscus_maniculatus_bairdii
ENSODEG00000019541	-	95	74.219	ENSPCIG00000015166	MRPS16	93	75.610	Phascolarctos_cinereus
ENSODEG00000019541	-	99	59.259	ENSPFOG00000014130	mrps16	85	63.559	Poecilia_formosa
ENSODEG00000019541	-	99	59.259	ENSPLAG00000018686	mrps16	85	63.559	Poecilia_latipinna
ENSODEG00000019541	-	99	59.259	ENSPMEG00000009648	mrps16	85	63.559	Poecilia_mexicana
ENSODEG00000019541	-	100	56.204	ENSPREG00000005800	mrps16	85	62.712	Poecilia_reticulata
ENSODEG00000019541	-	100	87.407	ENSPCOG00000009898	MRPS16	92	88.710	Propithecus_coquereli
ENSODEG00000019541	-	99	85.714	ENSPVAG00000012996	MRPS16	93	87.903	Pteropus_vampyrus
ENSODEG00000019541	-	81	66.667	ENSPNYG00000018439	mrps16	82	66.667	Pundamilia_nyererei
ENSODEG00000019541	-	99	60.902	ENSPNAG00000027291	mrps16	85	67.826	Pygocentrus_nattereri
ENSODEG00000019541	-	100	87.407	ENSRNOG00000006898	Mrps16	100	87.407	Rattus_norvegicus
ENSODEG00000019541	-	100	87.407	ENSRBIG00000037015	MRPS16	99	87.407	Rhinopithecus_bieti
ENSODEG00000019541	-	100	87.407	ENSRROG00000040939	MRPS16	99	87.407	Rhinopithecus_roxellana
ENSODEG00000019541	-	100	87.407	ENSSBOG00000016492	MRPS16	99	87.407	Saimiri_boliviensis_boliviensis
ENSODEG00000019541	-	96	71.318	ENSSHAG00000003006	MRPS16	91	71.545	Sarcophilus_harrisii
ENSODEG00000019541	-	91	65.041	ENSSFOG00015007264	mrps16	87	65.041	Scleropages_formosus
ENSODEG00000019541	-	98	59.701	ENSSMAG00000014748	mrps16	85	63.478	Scophthalmus_maximus
ENSODEG00000019541	-	98	58.955	ENSSDUG00000015177	mrps16	82	65.487	Seriola_dumerili
ENSODEG00000019541	-	98	58.955	ENSSLDG00000004507	mrps16	82	65.487	Seriola_lalandi_dorsalis
ENSODEG00000019541	-	100	60.741	ENSSPUG00000012312	MRPS16	90	65.323	Sphenodon_punctatus
ENSODEG00000019541	-	80	67.273	ENSSPAG00000007520	mrps16	92	61.905	Stegastes_partitus
ENSODEG00000019541	-	78	64.486	ENSTRUG00000021325	mrps16	97	61.905	Takifugu_rubripes
ENSODEG00000019541	-	84	64.348	ENSTNIG00000014796	MRPS16	83	64.348	Tetraodon_nigroviridis
ENSODEG00000019541	-	84	64.348	ENSTNIG00000006736	mrps16	83	64.348	Tetraodon_nigroviridis
ENSODEG00000019541	-	95	87.500	ENSTTRG00000000825	MRPS16	93	89.076	Tursiops_truncatus
ENSODEG00000019541	-	100	87.407	ENSUAMG00000005153	MRPS16	92	89.516	Ursus_americanus
ENSODEG00000019541	-	100	87.407	ENSUMAG00000009089	MRPS16	92	89.516	Ursus_maritimus
ENSODEG00000019541	-	94	87.402	ENSVPAG00000007263	MRPS16	93	89.076	Vicugna_pacos
ENSODEG00000019541	-	99	84.211	ENSVVUG00000022733	-	90	86.066	Vulpes_vulpes
ENSODEG00000019541	-	75	77.228	ENSVVUG00000005415	-	89	77.228	Vulpes_vulpes
ENSODEG00000019541	-	100	60.000	ENSXETG00000001399	mrps16	82	67.241	Xenopus_tropicalis
ENSODEG00000019541	-	87	62.185	ENSXCOG00000008280	mrps16	83	64.486	Xiphophorus_couchianus
ENSODEG00000019541	-	95	60.769	ENSXMAG00000000052	mrps16	88	62.712	Xiphophorus_maculatus