EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019564 (Gene tree)
Gene ID: 101592922
Gene Symbol: -
Alias: -
Full Name: DNA repair and recombination protein RAD54B-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 2706 bases
Position: chrJH651562.1:3764330-3767035
Accession: 101592922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026182	ResIII	PF04851.15	3.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026629	-	2706	XM_023716331	ENSODEP00000026182	901 (aa)	XP_023572099	UPI0003340AF6

Gene Model

Click here to download ENSODEG00000019564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019564	-	89	90.199	ENSODEG00000002650	-	96	96.302
ENSODEG00000019564	-	59	32.492	ENSODEG00000016588	ERCC6L2	89	30.075
ENSODEG00000019564	-	55	30.934	ENSODEG00000002494	CHD1L	50	30.934
ENSODEG00000019564	-	64	48.136	ENSODEG00000008519	RAD54L	76	48.136
ENSODEG00000019564	-	65	31.856	ENSODEG00000012163	SMARCA1	52	31.856

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019564	-	80	87.431	ENSG00000265817	FSBP	99	87.431	Homo_sapiens
ENSODEG00000019564	-	99	84.158	ENSG00000197275	RAD54B	99	84.158	Homo_sapiens
ENSODEG00000019564	-	100	82.127	ENSAMEG00000005834	-	100	82.127	Ailuropoda_melanoleuca
ENSODEG00000019564	-	99	55.410	ENSACIG00000013005	rad54b	99	55.410	Amphilophus_citrinellus
ENSODEG00000019564	-	99	55.330	ENSAOCG00000008523	rad54b	99	55.437	Amphiprion_ocellaris
ENSODEG00000019564	-	99	55.470	ENSAPEG00000001673	rad54b	99	55.470	Amphiprion_percula
ENSODEG00000019564	-	99	55.275	ENSATEG00000001527	rad54b	99	55.275	Anabas_testudineus
ENSODEG00000019564	-	99	67.467	ENSAPLG00000014366	-	99	67.467	Anas_platyrhynchos
ENSODEG00000019564	-	88	69.837	ENSACAG00000003671	-	99	69.837	Anolis_carolinensis
ENSODEG00000019564	-	72	85.604	ENSANAG00000019528	-	99	85.604	Aotus_nancymaae
ENSODEG00000019564	-	99	55.336	ENSACLG00000007826	rad54b	99	55.336	Astatotilapia_calliptera
ENSODEG00000019564	-	86	57.848	ENSAMXG00000039985	rad54b	94	57.591	Astyanax_mexicanus
ENSODEG00000019564	-	100	80.659	ENSBTAG00000000632	RAD54B	100	80.659	Bos_taurus
ENSODEG00000019564	-	79	34.724	WBGene00013792	Y116A8C.13	85	35.060	Caenorhabditis_elegans
ENSODEG00000019564	-	99	82.599	ENSCJAG00000000080	-	99	85.615	Callithrix_jacchus
ENSODEG00000019564	-	100	80.811	ENSCAFG00000009179	RAD54B	99	80.811	Canis_familiaris
ENSODEG00000019564	-	100	80.482	ENSCAFG00020012084	-	99	80.482	Canis_lupus_dingo
ENSODEG00000019564	-	100	80.659	ENSCHIG00000008230	-	100	80.659	Capra_hircus
ENSODEG00000019564	-	100	83.864	ENSTSYG00000013234	-	100	83.864	Carlito_syrichta
ENSODEG00000019564	-	100	91.040	ENSCPOG00000011643	-	99	91.040	Cavia_porcellus
ENSODEG00000019564	-	99	82.690	ENSCCAG00000011754	-	99	85.596	Cebus_capucinus
ENSODEG00000019564	-	99	83.811	ENSCATG00000030661	-	99	86.999	Cercocebus_atys
ENSODEG00000019564	-	99	91.381	ENSCLAG00000010476	-	99	91.381	Chinchilla_lanigera
ENSODEG00000019564	-	99	83.590	ENSCSAG00000012712	-	99	83.590	Chlorocebus_sabaeus
ENSODEG00000019564	-	99	68.662	ENSCPBG00000003204	-	99	69.059	Chrysemys_picta_bellii
ENSODEG00000019564	-	99	83.590	ENSCANG00000017939	-	99	86.722	Colobus_angolensis_palliatus
ENSODEG00000019564	-	100	77.765	ENSCGRG00001020184	Rad54b	100	77.765	Cricetulus_griseus_chok1gshd
ENSODEG00000019564	-	100	76.549	ENSCGRG00000016752	Rad54b	100	76.549	Cricetulus_griseus_crigri
ENSODEG00000019564	-	90	57.282	ENSCSEG00000001601	rad54b	96	57.282	Cynoglossus_semilaevis
ENSODEG00000019564	-	99	56.925	ENSCVAG00000009200	rad54b	99	56.925	Cyprinodon_variegatus
ENSODEG00000019564	-	100	52.548	ENSDARG00000092134	rad54b	100	60.061	Danio_rerio
ENSODEG00000019564	-	99	79.912	ENSDNOG00000015535	-	99	79.912	Dasypus_novemcinctus
ENSODEG00000019564	-	100	81.898	ENSDORG00000002492	Rad54b	100	81.898	Dipodomys_ordii
ENSODEG00000019564	-	87	79.592	ENSETEG00000010605	-	100	79.592	Echinops_telfairi
ENSODEG00000019564	-	99	47.033	ENSEBUG00000009104	rad54b	98	47.033	Eptatretus_burgeri
ENSODEG00000019564	-	97	81.200	ENSEASG00005004021	-	100	81.200	Equus_asinus_asinus
ENSODEG00000019564	-	100	81.429	ENSECAG00000021949	-	99	81.429	Equus_caballus
ENSODEG00000019564	-	83	82.609	ENSEEUG00000008056	-	83	82.609	Erinaceus_europaeus
ENSODEG00000019564	-	99	53.454	ENSELUG00000009287	rad54b	99	53.454	Esox_lucius
ENSODEG00000019564	-	100	82.018	ENSFCAG00000015513	-	100	85.950	Felis_catus
ENSODEG00000019564	-	99	66.631	ENSFALG00000005467	-	99	66.631	Ficedula_albicollis
ENSODEG00000019564	-	99	89.317	ENSFDAG00000020541	-	100	89.317	Fukomys_damarensis
ENSODEG00000019564	-	87	58.595	ENSFHEG00000014382	rad54b	87	58.595	Fundulus_heteroclitus
ENSODEG00000019564	-	87	57.338	ENSGMOG00000014774	rad54b	99	57.463	Gadus_morhua
ENSODEG00000019564	-	99	67.650	ENSGALG00000043597	RAD54B	99	67.650	Gallus_gallus
ENSODEG00000019564	-	99	56.326	ENSGAFG00000007901	rad54b	99	56.326	Gambusia_affinis
ENSODEG00000019564	-	99	54.310	ENSGACG00000009128	rad54b	99	54.310	Gasterosteus_aculeatus
ENSODEG00000019564	-	99	67.974	ENSGAGG00000018747	-	99	67.974	Gopherus_agassizii
ENSODEG00000019564	-	100	83.754	ENSGGOG00000023516	-	100	83.754	Gorilla_gorilla
ENSODEG00000019564	-	99	54.818	ENSHBUG00000016017	rad54b	99	54.818	Haplochromis_burtoni
ENSODEG00000019564	-	100	88.755	ENSHGLG00000008263	RAD54B	99	88.755	Heterocephalus_glaber_female
ENSODEG00000019564	-	100	87.961	ENSHGLG00100008108	-	99	87.961	Heterocephalus_glaber_male
ENSODEG00000019564	-	99	53.736	ENSHCOG00000004764	rad54b	98	55.679	Hippocampus_comes
ENSODEG00000019564	-	99	52.421	ENSIPUG00000018531	rad54b	99	52.421	Ictalurus_punctatus
ENSODEG00000019564	-	99	82.667	ENSSTOG00000010791	-	99	82.667	Ictidomys_tridecemlineatus
ENSODEG00000019564	-	100	78.132	ENSJJAG00000010314	Rad54b	100	78.132	Jaculus_jaculus
ENSODEG00000019564	-	99	53.501	ENSKMAG00000004744	rad54b	99	53.501	Kryptolebias_marmoratus
ENSODEG00000019564	-	82	68.097	ENSLACG00000000859	-	100	68.097	Latimeria_chalumnae
ENSODEG00000019564	-	99	58.584	ENSLOCG00000010100	rad54b	98	62.019	Lepisosteus_oculatus
ENSODEG00000019564	-	89	82.550	ENSLAFG00000015315	-	100	82.550	Loxodonta_africana
ENSODEG00000019564	-	99	83.811	ENSMFAG00000031629	-	99	86.860	Macaca_fascicularis
ENSODEG00000019564	-	99	83.811	ENSMMUG00000005659	-	99	83.811	Macaca_mulatta
ENSODEG00000019564	-	99	83.682	ENSMNEG00000016408	-	99	83.682	Macaca_nemestrina
ENSODEG00000019564	-	99	83.811	ENSMLEG00000006946	-	99	83.811	Mandrillus_leucophaeus
ENSODEG00000019564	-	99	55.410	ENSMAMG00000012269	rad54b	99	55.410	Mastacembelus_armatus
ENSODEG00000019564	-	99	54.818	ENSMZEG00005005281	rad54b	95	59.899	Maylandia_zebra
ENSODEG00000019564	-	99	66.703	ENSMGAG00000012024	-	99	66.703	Meleagris_gallopavo
ENSODEG00000019564	-	100	76.770	ENSMAUG00000013586	Rad54b	100	76.770	Mesocricetus_auratus
ENSODEG00000019564	-	92	84.928	ENSMICG00000000754	-	96	84.928	Microcebus_murinus
ENSODEG00000019564	-	100	75.385	ENSMOCG00000020035	Rad54b	99	75.385	Microtus_ochrogaster
ENSODEG00000019564	-	87	59.119	ENSMMOG00000003394	rad54b	89	59.119	Mola_mola
ENSODEG00000019564	-	89	75.841	ENSMODG00000007343	-	99	75.841	Monodelphis_domestica
ENSODEG00000019564	-	71	60.031	ENSMALG00000001520	rad54b	99	60.031	Monopterus_albus
ENSODEG00000019564	-	100	77.434	MGP_CAROLIEiJ_G0025810	Rad54b	100	77.434	Mus_caroli
ENSODEG00000019564	-	100	76.159	ENSMUSG00000078773	Rad54b	100	76.159	Mus_musculus
ENSODEG00000019564	-	100	76.711	MGP_PahariEiJ_G0023933	Rad54b	100	76.711	Mus_pahari
ENSODEG00000019564	-	100	76.932	MGP_SPRETEiJ_G0026758	Rad54b	100	76.932	Mus_spretus
ENSODEG00000019564	-	89	83.807	ENSMPUG00000008878	-	99	83.807	Mustela_putorius_furo
ENSODEG00000019564	-	99	80.110	ENSMLUG00000008953	-	99	80.110	Myotis_lucifugus
ENSODEG00000019564	-	100	80.109	ENSNGAG00000017537	Rad54b	100	80.109	Nannospalax_galili
ENSODEG00000019564	-	99	55.336	ENSNBRG00000013394	rad54b	99	55.336	Neolamprologus_brichardi
ENSODEG00000019564	-	99	84.378	ENSNLEG00000003062	-	99	87.431	Nomascus_leucogenys
ENSODEG00000019564	-	71	72.818	ENSMEUG00000012426	-	71	72.818	Notamacropus_eugenii
ENSODEG00000019564	-	99	54.984	ENSONIG00000006067	rad54b	99	54.984	Oreochromis_niloticus
ENSODEG00000019564	-	83	74.900	ENSOANG00000011348	-	100	74.900	Ornithorhynchus_anatinus
ENSODEG00000019564	-	100	81.099	ENSOCUG00000016478	-	99	81.099	Oryctolagus_cuniculus
ENSODEG00000019564	-	99	54.633	ENSORLG00000008918	rad54b	99	62.096	Oryzias_latipes
ENSODEG00000019564	-	71	62.096	ENSORLG00020012171	rad54b	99	62.096	Oryzias_latipes_hni
ENSODEG00000019564	-	99	54.228	ENSORLG00015018536	rad54b	99	54.228	Oryzias_latipes_hsok
ENSODEG00000019564	-	85	60.903	ENSOMEG00000004345	rad54b	99	60.903	Oryzias_melastigma
ENSODEG00000019564	-	99	81.628	ENSOGAG00000007854	-	99	81.628	Otolemur_garnettii
ENSODEG00000019564	-	89	83.827	ENSOARG00000007691	-	99	83.827	Ovis_aries
ENSODEG00000019564	-	99	82.398	ENSPPAG00000029572	-	99	82.398	Pan_paniscus
ENSODEG00000019564	-	100	82.127	ENSPPRG00000007571	-	100	86.088	Panthera_pardus
ENSODEG00000019564	-	80	86.226	ENSPTIG00000012670	-	100	86.226	Panthera_tigris_altaica
ENSODEG00000019564	-	99	84.048	ENSPTRG00000020427	-	99	87.293	Pan_troglodytes
ENSODEG00000019564	-	99	83.921	ENSPANG00000019566	-	99	83.921	Papio_anubis
ENSODEG00000019564	-	99	57.314	ENSPKIG00000014974	rad54b	99	57.314	Paramormyrops_kingsleyae
ENSODEG00000019564	-	99	66.775	ENSPSIG00000002383	-	98	72.727	Pelodiscus_sinensis
ENSODEG00000019564	-	100	77.876	ENSPEMG00000012133	Rad54b	100	77.876	Peromyscus_maniculatus_bairdii
ENSODEG00000019564	-	87	57.322	ENSPMAG00000002916	rad54b	99	57.572	Petromyzon_marinus
ENSODEG00000019564	-	89	76.750	ENSPCIG00000020151	-	94	75.965	Phascolarctos_cinereus
ENSODEG00000019564	-	99	55.626	ENSPFOG00000023411	rad54b	99	55.614	Poecilia_formosa
ENSODEG00000019564	-	99	55.945	ENSPLAG00000010430	rad54b	99	55.945	Poecilia_latipinna
ENSODEG00000019564	-	99	55.732	ENSPMEG00000016873	rad54b	99	55.720	Poecilia_mexicana
ENSODEG00000019564	-	99	56.813	ENSPREG00000018443	rad54b	99	56.813	Poecilia_reticulata
ENSODEG00000019564	-	99	84.048	ENSPPYG00000018750	-	99	84.048	Pongo_abelii
ENSODEG00000019564	-	99	84.708	ENSPCOG00000026845	-	99	87.017	Propithecus_coquereli
ENSODEG00000019564	-	88	84.459	ENSPVAG00000000261	-	92	84.459	Pteropus_vampyrus
ENSODEG00000019564	-	87	58.942	ENSPNYG00000018303	rad54b	96	58.942	Pundamilia_nyererei
ENSODEG00000019564	-	99	54.298	ENSPNAG00000000295	rad54b	99	54.298	Pygocentrus_nattereri
ENSODEG00000019564	-	100	75.332	ENSRNOG00000039949	Rad54b	100	75.332	Rattus_norvegicus
ENSODEG00000019564	-	99	83.150	ENSRBIG00000020419	-	99	83.150	Rhinopithecus_bieti
ENSODEG00000019564	-	99	83.150	ENSRROG00000039897	-	99	83.150	Rhinopithecus_roxellana
ENSODEG00000019564	-	79	37.500	YBR073W	RDH54	79	37.736	Saccharomyces_cerevisiae
ENSODEG00000019564	-	99	82.709	ENSSBOG00000028501	-	99	82.709	Saimiri_boliviensis_boliviensis
ENSODEG00000019564	-	99	72.167	ENSSHAG00000017038	-	99	72.167	Sarcophilus_harrisii
ENSODEG00000019564	-	63	64.386	ENSSFOG00015008483	rad54b	88	64.386	Scleropages_formosus
ENSODEG00000019564	-	99	54.065	ENSSMAG00000018659	rad54b	99	54.254	Scophthalmus_maximus
ENSODEG00000019564	-	99	53.659	ENSSDUG00000001122	rad54b	98	54.083	Seriola_dumerili
ENSODEG00000019564	-	99	53.968	ENSSLDG00000013787	rad54b	99	54.382	Seriola_lalandi_dorsalis
ENSODEG00000019564	-	99	67.991	ENSSPUG00000016497	-	99	67.991	Sphenodon_punctatus
ENSODEG00000019564	-	99	56.018	ENSSPAG00000012800	rad54b	99	56.127	Stegastes_partitus
ENSODEG00000019564	-	99	80.620	ENSSSCG00000006101	-	99	84.403	Sus_scrofa
ENSODEG00000019564	-	99	66.703	ENSTGUG00000011880	-	99	66.703	Taeniopygia_guttata
ENSODEG00000019564	-	99	53.708	ENSTRUG00000010015	rad54b	99	54.228	Takifugu_rubripes
ENSODEG00000019564	-	100	78.132	ENSTTRG00000006312	-	100	78.132	Tursiops_truncatus
ENSODEG00000019564	-	100	82.127	ENSUMAG00000016401	-	100	82.127	Ursus_maritimus
ENSODEG00000019564	-	100	80.132	ENSVPAG00000003157	-	100	80.132	Vicugna_pacos
ENSODEG00000019564	-	99	55.260	ENSXETG00000025924	rad54b	99	59.398	Xenopus_tropicalis
ENSODEG00000019564	-	99	56.216	ENSXMAG00000013141	rad54b	99	56.216	Xiphophorus_maculatus