EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSODEG00000019683 (Gene tree)
Gene ID
101579936
Gene Symbol
LIG4
Alias
-
Full Name
DNA ligase 4
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Plus strand
Length
2736 bases
Position
chrJH651554.1:3715797-3718532
Accession
101579936
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000026283RNA_ligasePF09414.102.1e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000026748LIG4-2012736XM_004631171ENSODEP00000026283911 (aa)XP_004631228UPI000333E93B
Gene Model
Click here to download ENSODEG00000019683's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019683's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000019683LIG410087.706ENSG00000174405LIG410087.706Homo_sapiens
ENSODEG00000019683LIG49964.874ENSAPOG00000000866lig49965.093Acanthochromis_polyacanthus
ENSODEG00000019683LIG410084.852ENSAMEG00000019685LIG49984.852Ailuropoda_melanoleuca
ENSODEG00000019683LIG49965.050ENSACIG00000018309lig49965.270Amphilophus_citrinellus
ENSODEG00000019683LIG49964.602ENSAOCG00000011768lig49964.823Amphiprion_ocellaris
ENSODEG00000019683LIG49964.712ENSAPEG00000017815lig49964.934Amphiprion_percula
ENSODEG00000019683LIG49964.066ENSATEG00000005583lig49964.176Anabas_testudineus
ENSODEG00000019683LIG49773.977ENSAPLG00000001673LIG49973.977Anas_platyrhynchos
ENSODEG00000019683LIG49973.865ENSACAG00000014566LIG49973.865Anolis_carolinensis
ENSODEG00000019683LIG410087.267ENSANAG00000012446LIG410087.267Aotus_nancymaae
ENSODEG00000019683LIG49964.634ENSACLG00000027051lig49864.634Astatotilapia_calliptera
ENSODEG00000019683LIG49963.867ENSAMXG00000008192lig49363.867Astyanax_mexicanus
ENSODEG00000019683LIG410085.291ENSBTAG00000015868LIG410085.291Bos_taurus
ENSODEG00000019683LIG410086.937ENSCJAG00000014689LIG410086.937Callithrix_jacchus
ENSODEG00000019683LIG410087.157ENSCAFG00000006031LIG410087.157Canis_familiaris
ENSODEG00000019683LIG410087.157ENSCAFG00020021230LIG410087.157Canis_lupus_dingo
ENSODEG00000019683LIG410084.962ENSCHIG00000001019LIG410084.962Capra_hircus
ENSODEG00000019683LIG49992.248ENSCAPG00000006284LIG49992.248Cavia_aperea
ENSODEG00000019683LIG410092.097ENSCPOG00000014266LIG410092.097Cavia_porcellus
ENSODEG00000019683LIG410086.937ENSCCAG00000019971LIG410086.937Cebus_capucinus
ENSODEG00000019683LIG410087.267ENSCATG00000021075LIG410087.267Cercocebus_atys
ENSODEG00000019683LIG410092.536ENSCLAG00000003376LIG410092.536Chinchilla_lanigera
ENSODEG00000019683LIG410087.596ENSCSAG00000000211LIG410087.596Chlorocebus_sabaeus
ENSODEG00000019683LIG49977.017ENSCPBG00000023291LIG410076.445Chrysemys_picta_bellii
ENSODEG00000019683LIG46845.946ENSCING00000009536-9545.907Ciona_intestinalis
ENSODEG00000019683LIG48346.265ENSCSAVG00000010336-9846.194Ciona_savignyi
ENSODEG00000019683LIG410087.596ENSCANG00000005805LIG410087.596Colobus_angolensis_palliatus
ENSODEG00000019683LIG410085.307ENSCGRG00001012072Lig410085.307Cricetulus_griseus_chok1gshd
ENSODEG00000019683LIG410085.307ENSCGRG00000013417Lig410085.307Cricetulus_griseus_crigri
ENSODEG00000019683LIG49765.455ENSCSEG00000013905lig49565.455Cynoglossus_semilaevis
ENSODEG00000019683LIG49964.563ENSCVAG00000007896lig49964.563Cyprinodon_variegatus
ENSODEG00000019683LIG49964.009ENSDARG00000060620lig49864.009Danio_rerio
ENSODEG00000019683LIG410085.965ENSDNOG00000000513LIG410085.965Dasypus_novemcinctus
ENSODEG00000019683LIG410086.169ENSDORG00000027303Lig410086.169Dipodomys_ordii
ENSODEG00000019683LIG48932.360FBgn0030506Lig49132.360Drosophila_melanogaster
ENSODEG00000019683LIG49981.486ENSETEG00000015563LIG410081.707Echinops_telfairi
ENSODEG00000019683LIG49943.218ENSEBUG00000014243lig49943.218Eptatretus_burgeri
ENSODEG00000019683LIG410087.047ENSEASG00005022073LIG410087.047Equus_asinus_asinus
ENSODEG00000019683LIG410086.498ENSECAG00000003257LIG410086.498Equus_caballus
ENSODEG00000019683LIG49964.648ENSELUG00000006787lig49964.537Esox_lucius
ENSODEG00000019683LIG410086.169ENSFCAG00000031985LIG410086.169Felis_catus
ENSODEG00000019683LIG48975.277ENSFALG00000004214LIG49875.277Ficedula_albicollis
ENSODEG00000019683LIG410091.328ENSFDAG00000008973LIG410091.328Fukomys_damarensis
ENSODEG00000019683LIG49964.009ENSFHEG00000007398lig48964.120Fundulus_heteroclitus
ENSODEG00000019683LIG48563.835ENSGMOG00000012843lig49964.083Gadus_morhua
ENSODEG00000019683LIG410073.362ENSGALG00000016854LIG410073.362Gallus_gallus
ENSODEG00000019683LIG49964.031ENSGAFG00000019779lig49563.586Gambusia_affinis
ENSODEG00000019683LIG49962.747ENSGACG00000014135lig49962.857Gasterosteus_aculeatus
ENSODEG00000019683LIG410087.596ENSGGOG00000027771LIG410087.596Gorilla_gorilla
ENSODEG00000019683LIG49964.412ENSHBUG00000006245lig49864.412Haplochromis_burtoni
ENSODEG00000019683LIG410091.218ENSHGLG00000000718LIG410091.218Heterocephalus_glaber_female
ENSODEG00000019683LIG410091.218ENSHGLG00100003265LIG410091.218Heterocephalus_glaber_male
ENSODEG00000019683LIG49963.666ENSHCOG00000012010lig49963.666Hippocampus_comes
ENSODEG00000019683LIG49964.615ENSIPUG00000013748lig49964.615Ictalurus_punctatus
ENSODEG00000019683LIG410086.608ENSSTOG00000024303LIG410086.608Ictidomys_tridecemlineatus
ENSODEG00000019683LIG410084.742ENSJJAG00000006750Lig410084.742Jaculus_jaculus
ENSODEG00000019683LIG49964.341ENSKMAG00000001149lig49964.341Kryptolebias_marmoratus
ENSODEG00000019683LIG49165.385ENSLBEG00000014578lig410065.625Labrus_bergylta
ENSODEG00000019683LIG49970.264ENSLACG00000003282LIG49970.264Latimeria_chalumnae
ENSODEG00000019683LIG49968.640ENSLOCG00000008901lig49868.791Lepisosteus_oculatus
ENSODEG00000019683LIG410083.790ENSLAFG00000031152LIG410083.680Loxodonta_africana
ENSODEG00000019683LIG410087.377ENSMFAG00000037235LIG410087.377Macaca_fascicularis
ENSODEG00000019683LIG410087.377ENSMMUG00000008874LIG410087.377Macaca_mulatta
ENSODEG00000019683LIG410087.377ENSMNEG00000023575LIG410087.377Macaca_nemestrina
ENSODEG00000019683LIG410087.377ENSMLEG00000026720LIG410087.377Mandrillus_leucophaeus
ENSODEG00000019683LIG49964.505ENSMAMG00000008472lig49964.725Mastacembelus_armatus
ENSODEG00000019683LIG49964.634ENSMZEG00005001855lig49864.634Maylandia_zebra
ENSODEG00000019683LIG410074.017ENSMGAG00000015532LIG410074.017Meleagris_gallopavo
ENSODEG00000019683LIG410082.437ENSMOCG00000019000Lig410082.437Microtus_ochrogaster
ENSODEG00000019683LIG49963.938ENSMMOG00000004390lig49963.938Mola_mola
ENSODEG00000019683LIG410080.022ENSMODG00000025064LIG410080.022Monodelphis_domestica
ENSODEG00000019683LIG49964.712ENSMALG00000008555lig49964.712Monopterus_albus
ENSODEG00000019683LIG410084.742MGP_CAROLIEiJ_G0030809Lig410084.742Mus_caroli
ENSODEG00000019683LIG410084.852ENSMUSG00000049717Lig410084.852Mus_musculus
ENSODEG00000019683LIG410084.413MGP_PahariEiJ_G0021270Lig410084.413Mus_pahari
ENSODEG00000019683LIG410085.071MGP_SPRETEiJ_G0031917Lig410085.071Mus_spretus
ENSODEG00000019683LIG410084.742ENSMPUG00000018675LIG410084.742Mustela_putorius_furo
ENSODEG00000019683LIG410086.828ENSMLUG00000001267LIG410086.828Myotis_lucifugus
ENSODEG00000019683LIG410084.303ENSNGAG00000013258Lig410084.303Nannospalax_galili
ENSODEG00000019683LIG49964.356ENSNBRG00000021252lig49964.356Neolamprologus_brichardi
ENSODEG00000019683LIG410087.377ENSNLEG00000007888LIG410087.377Nomascus_leucogenys
ENSODEG00000019683LIG410084.083ENSOPRG00000005765LIG410084.083Ochotona_princeps
ENSODEG00000019683LIG49964.634ENSONIG00000011969lig49764.856Oreochromis_niloticus
ENSODEG00000019683LIG410087.157ENSOCUG00000015734LIG410087.157Oryctolagus_cuniculus
ENSODEG00000019683LIG49963.767ENSORLG00000004041lig49963.987Oryzias_latipes
ENSODEG00000019683LIG49964.207ENSORLG00020019607lig49964.427Oryzias_latipes_hni
ENSODEG00000019683LIG49963.877ENSORLG00015017754lig49964.097Oryzias_latipes_hsok
ENSODEG00000019683LIG47469.675ENSOMEG00000003459lig49869.778Oryzias_melastigma
ENSODEG00000019683LIG410086.842ENSOGAG00000032120LIG49986.842Otolemur_garnettii
ENSODEG00000019683LIG48287.248ENSOARG00000005590LIG49887.248Ovis_aries
ENSODEG00000019683LIG410087.267ENSPPAG00000032998LIG410087.267Pan_paniscus
ENSODEG00000019683LIG410086.718ENSPPRG00000017804LIG410086.718Panthera_pardus
ENSODEG00000019683LIG410086.608ENSPTIG00000010051LIG410086.608Panthera_tigris_altaica
ENSODEG00000019683LIG410087.377ENSPTRG00000006025LIG410087.377Pan_troglodytes
ENSODEG00000019683LIG410087.377ENSPANG00000007562LIG410087.377Papio_anubis
ENSODEG00000019683LIG49964.835ENSPKIG00000011645lig49864.835Paramormyrops_kingsleyae
ENSODEG00000019683LIG49976.813ENSPSIG00000001504LIG49976.813Pelodiscus_sinensis
ENSODEG00000019683LIG49962.667ENSPMGG00000013486lig49962.239Periophthalmus_magnuspinnatus
ENSODEG00000019683LIG410083.991ENSPEMG00000000076Lig410083.991Peromyscus_maniculatus_bairdii
ENSODEG00000019683LIG410080.921ENSPCIG00000021882LIG410080.571Phascolarctos_cinereus
ENSODEG00000019683LIG49963.960ENSPFOG00000000797lig49963.516Poecilia_formosa
ENSODEG00000019683LIG49963.849ENSPLAG00000001196lig49963.407Poecilia_latipinna
ENSODEG00000019683LIG49963.960ENSPMEG00000021353lig49963.886Poecilia_mexicana
ENSODEG00000019683LIG49963.515ENSPREG00000007323lig49963.447Poecilia_reticulata
ENSODEG00000019683LIG410087.596ENSPPYG00000005540LIG410087.596Pongo_abelii
ENSODEG00000019683LIG410086.059ENSPVAG00000016403LIG410086.059Pteropus_vampyrus
ENSODEG00000019683LIG49964.523ENSPNYG00000009660lig49864.523Pundamilia_nyererei
ENSODEG00000019683LIG410063.527ENSPNAG00000028069LIG410063.527Pygocentrus_nattereri
ENSODEG00000019683LIG410063.527ENSPNAG00000028056lig410063.527Pygocentrus_nattereri
ENSODEG00000019683LIG410083.205ENSRNOG00000014605Lig410083.205Rattus_norvegicus
ENSODEG00000019683LIG410086.498ENSRBIG00000039962LIG410086.498Rhinopithecus_bieti
ENSODEG00000019683LIG410087.596ENSRROG00000006040LIG410087.596Rhinopithecus_roxellana
ENSODEG00000019683LIG410086.828ENSSBOG00000019029LIG410086.828Saimiri_boliviensis_boliviensis
ENSODEG00000019683LIG410076.948ENSSHAG00000009525LIG410076.948Sarcophilus_harrisii
ENSODEG00000019683LIG410064.629ENSSFOG00015012835lig410064.629Scleropages_formosus
ENSODEG00000019683LIG49961.905ENSSMAG00000011267lig49961.905Scophthalmus_maximus
ENSODEG00000019683LIG49964.856ENSSDUG00000010343lig49864.856Seriola_dumerili
ENSODEG00000019683LIG49963.123ENSSLDG00000003239lig49963.123Seriola_lalandi_dorsalis
ENSODEG00000019683LIG410079.869ENSSARG00000006573LIG410079.869Sorex_araneus
ENSODEG00000019683LIG49376.185ENSSPUG00000002444LIG410076.185Sphenodon_punctatus
ENSODEG00000019683LIG49964.491ENSSPAG00000001609lig49964.491Stegastes_partitus
ENSODEG00000019683LIG410084.962ENSSSCG00000009540LIG410084.962Sus_scrofa
ENSODEG00000019683LIG49973.894ENSTGUG00000010795LIG49973.894Taeniopygia_guttata
ENSODEG00000019683LIG49964.009ENSTRUG00000009984lig49964.009Takifugu_rubripes
ENSODEG00000019683LIG49964.452ENSTNIG00000010348lig49964.673Tetraodon_nigroviridis
ENSODEG00000019683LIG410087.157ENSTBEG00000017741LIG410087.157Tupaia_belangeri
ENSODEG00000019683LIG410086.498ENSTTRG00000012660LIG410086.498Tursiops_truncatus
ENSODEG00000019683LIG410084.962ENSUAMG00000003773LIG410084.962Ursus_americanus
ENSODEG00000019683LIG410069.323ENSXETG00000002654lig410069.323Xenopus_tropicalis
ENSODEG00000019683LIG49963.889ENSXCOG00000017401lig49963.447Xiphophorus_couchianus
ENSODEG00000019683LIG49964.000ENSXMAG00000015142lig49963.557Xiphophorus_maculatus

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