EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019708 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 717 bases
Position: chrJH651580.1:9380670-9381386
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026307	LSM	PF01423.22	6.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026773	-	717	-	ENSODEP00000026307	238 (aa)	-	-

Gene Model

Click here to download ENSODEG00000019708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019708's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019708	-	82	88.776	ENSODEG00000016060	-	90	88.732
ENSODEG00000019708	-	93	79.039	ENSODEG00000016065	-	87	86.957
ENSODEG00000019708	-	96	99.563	ENSODEG00000013478	-	95	99.563
ENSODEG00000019708	-	93	92.308	ENSODEG00000004305	-	99	92.140
ENSODEG00000019708	-	89	99.061	ENSODEG00000020110	-	100	95.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019708	-	95	99.559	ENSG00000128739	SNRPN	100	99.408	Homo_sapiens
ENSODEG00000019708	-	92	99.087	ENSAMEG00000007034	SNRPN	98	95.798	Ailuropoda_melanoleuca
ENSODEG00000019708	-	96	99.123	ENSANAG00000034241	SNRPN	100	95.833	Aotus_nancymaae
ENSODEG00000019708	-	93	98.649	ENSBTAG00000008251	SNRPN	100	98.649	Bos_taurus
ENSODEG00000019708	-	95	99.559	ENSCJAG00000003759	-	100	95.833	Callithrix_jacchus
ENSODEG00000019708	-	98	97.436	ENSCJAG00000042622	-	98	97.436	Callithrix_jacchus
ENSODEG00000019708	-	93	98.643	ENSCAFG00000010127	SNRPN	100	95.417	Canis_familiaris
ENSODEG00000019708	-	93	98.649	ENSCAFG00020024075	SNRPN	100	95.417	Canis_lupus_dingo
ENSODEG00000019708	-	97	98.261	ENSCHIG00000017477	SNRPN	100	98.261	Capra_hircus
ENSODEG00000019708	-	89	99.061	ENSTSYG00000005248	SNRPN	100	95.833	Carlito_syrichta
ENSODEG00000019708	-	96	98.690	ENSCAPG00000003047	SNRPN	100	95.833	Cavia_aperea
ENSODEG00000019708	-	96	98.690	ENSCPOG00000020270	SNRPN	100	95.833	Cavia_porcellus
ENSODEG00000019708	-	95	99.559	ENSCCAG00000024231	SNRPN	100	95.833	Cebus_capucinus
ENSODEG00000019708	-	95	99.559	ENSCATG00000032518	SNRPN	100	95.833	Cercocebus_atys
ENSODEG00000019708	-	89	99.061	ENSCLAG00000011376	SNRPN	100	95.833	Chinchilla_lanigera
ENSODEG00000019708	-	89	99.061	ENSCSAG00000006406	SNRPN	100	95.833	Chlorocebus_sabaeus
ENSODEG00000019708	-	87	99.517	ENSCHOG00000001846	SNRPN	88	95.726	Choloepus_hoffmanni
ENSODEG00000019708	-	95	99.559	ENSCANG00000041156	SNRPN	100	95.833	Colobus_angolensis_palliatus
ENSODEG00000019708	-	89	99.052	ENSCGRG00001004136	Snrpn	100	95.417	Cricetulus_griseus_chok1gshd
ENSODEG00000019708	-	89	99.052	ENSCGRG00000001621	Snrpn	100	95.417	Cricetulus_griseus_crigri
ENSODEG00000019708	-	73	91.908	ENSCVAG00000014193	SNRPN	69	92.262	Cyprinodon_variegatus
ENSODEG00000019708	-	76	99.448	ENSDNOG00000037060	SNRPN	98	95.378	Dasypus_novemcinctus
ENSODEG00000019708	-	96	99.563	ENSDORG00000004527	Snrpn	95	99.563	Dipodomys_ordii
ENSODEG00000019708	-	93	98.643	ENSEASG00005017871	SNRPN	100	95.417	Equus_asinus_asinus
ENSODEG00000019708	-	93	98.643	ENSECAG00000018148	SNRPN	100	95.417	Equus_caballus
ENSODEG00000019708	-	92	98.630	ENSEEUG00000007440	-	99	95.378	Erinaceus_europaeus
ENSODEG00000019708	-	97	98.261	ENSFCAG00000022298	-	100	95.417	Felis_catus
ENSODEG00000019708	-	96	99.563	ENSFDAG00000016578	-	95	99.563	Fukomys_damarensis
ENSODEG00000019708	-	77	86.339	ENSFDAG00000010528	-	86	86.339	Fukomys_damarensis
ENSODEG00000019708	-	74	76.271	ENSGMOG00000018161	SNRPN	74	75.595	Gadus_morhua
ENSODEG00000019708	-	95	99.559	ENSGGOG00000003988	SNRPN	100	95.833	Gorilla_gorilla
ENSODEG00000019708	-	90	73.023	ENSGGOG00000024469	-	69	83.942	Gorilla_gorilla
ENSODEG00000019708	-	90	80.000	ENSHGLG00000020936	-	88	78.873	Heterocephalus_glaber_female
ENSODEG00000019708	-	89	99.061	ENSHGLG00000011924	SNRPN	100	95.833	Heterocephalus_glaber_female
ENSODEG00000019708	-	89	89.671	ENSHGLG00000019812	-	100	87.917	Heterocephalus_glaber_female
ENSODEG00000019708	-	95	78.333	ENSHGLG00000002327	-	88	84.038	Heterocephalus_glaber_female
ENSODEG00000019708	-	95	75.833	ENSHGLG00100004881	-	88	82.160	Heterocephalus_glaber_male
ENSODEG00000019708	-	89	99.061	ENSHGLG00100016559	SNRPN	100	95.833	Heterocephalus_glaber_male
ENSODEG00000019708	-	89	89.671	ENSHGLG00100021056	-	100	87.917	Heterocephalus_glaber_male
ENSODEG00000019708	-	89	99.061	ENSSTOG00000001339	SNRPN	100	95.833	Ictidomys_tridecemlineatus
ENSODEG00000019708	-	95	100.000	ENSLAFG00000009458	SNRPN	95	100.000	Loxodonta_africana
ENSODEG00000019708	-	97	98.261	ENSMFAG00000042235	SNRPN	100	95.833	Macaca_fascicularis
ENSODEG00000019708	-	97	98.261	ENSMMUG00000023139	SNURF	100	95.833	Macaca_mulatta
ENSODEG00000019708	-	95	99.559	ENSMNEG00000031291	SNRPN	100	95.833	Macaca_nemestrina
ENSODEG00000019708	-	95	99.559	ENSMLEG00000038837	SNRPN	100	95.833	Mandrillus_leucophaeus
ENSODEG00000019708	-	92	86.301	ENSMGAG00000008696	SNRPN	99	83.613	Meleagris_gallopavo
ENSODEG00000019708	-	96	99.127	ENSMAUG00000000051	Snrpn	100	99.127	Mesocricetus_auratus
ENSODEG00000019708	-	89	99.061	ENSMICG00000042356	SNRPN	100	95.833	Microcebus_murinus
ENSODEG00000019708	-	94	99.552	ENSMOCG00000015350	Snrpn	100	95.833	Microtus_ochrogaster
ENSODEG00000019708	-	93	93.665	ENSMODG00000013926	-	100	90.417	Monodelphis_domestica
ENSODEG00000019708	-	89	99.061	MGP_CAROLIEiJ_G0029815	Snrpn	100	95.833	Mus_caroli
ENSODEG00000019708	-	89	99.061	ENSMUSG00000102252	Snrpn	100	95.833	Mus_musculus
ENSODEG00000019708	-	89	99.061	MGP_PahariEiJ_G0013040	Snrpn	100	95.833	Mus_pahari
ENSODEG00000019708	-	89	99.061	MGP_SPRETEiJ_G0030918	Snrpn	100	95.833	Mus_spretus
ENSODEG00000019708	-	89	51.185	ENSMPUG00000007115	-	64	69.718	Mustela_putorius_furo
ENSODEG00000019708	-	93	98.643	ENSMPUG00000014638	-	100	95.417	Mustela_putorius_furo
ENSODEG00000019708	-	95	99.559	ENSMLUG00000023361	-	93	99.559	Myotis_lucifugus
ENSODEG00000019708	-	86	61.275	ENSMLUG00000025849	-	73	63.057	Myotis_lucifugus
ENSODEG00000019708	-	61	70.833	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSODEG00000019708	-	89	99.061	ENSNGAG00000000181	Snrpn	100	95.833	Nannospalax_galili
ENSODEG00000019708	-	89	80.751	ENSNLEG00000001376	SNRPN	99	79.583	Nomascus_leucogenys
ENSODEG00000019708	-	89	98.598	ENSOCUG00000003532	-	100	94.606	Oryctolagus_cuniculus
ENSODEG00000019708	-	74	91.525	ENSORLG00020007490	SNRPN	69	92.857	Oryzias_latipes_hni
ENSODEG00000019708	-	74	91.525	ENSORLG00015003332	SNRPN	69	92.857	Oryzias_latipes_hsok
ENSODEG00000019708	-	74	92.090	ENSOMEG00000002066	SNRPN	69	93.452	Oryzias_melastigma
ENSODEG00000019708	-	89	99.061	ENSOGAG00000007392	SNRPN	100	95.833	Otolemur_garnettii
ENSODEG00000019708	-	93	98.643	ENSOARG00000009080	SNRPN	100	95.417	Ovis_aries
ENSODEG00000019708	-	97	98.261	ENSPPAG00000027650	SNRPN	100	95.833	Pan_paniscus
ENSODEG00000019708	-	93	71.622	ENSPPAG00000034049	-	65	79.720	Pan_paniscus
ENSODEG00000019708	-	93	98.643	ENSPPRG00000019878	-	100	95.417	Panthera_pardus
ENSODEG00000019708	-	86	63.902	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSODEG00000019708	-	97	97.826	ENSPTIG00000004537	SNRPN	100	95.000	Panthera_tigris_altaica
ENSODEG00000019708	-	93	72.072	ENSPTRG00000052400	-	65	80.420	Pan_troglodytes
ENSODEG00000019708	-	97	98.261	ENSPTRG00000006826	SNRPN	100	95.833	Pan_troglodytes
ENSODEG00000019708	-	95	99.559	ENSPANG00000020142	SNRPN	100	95.833	Papio_anubis
ENSODEG00000019708	-	89	99.061	ENSPEMG00000012911	-	100	95.833	Peromyscus_maniculatus_bairdii
ENSODEG00000019708	-	90	94.860	ENSPEMG00000020979	-	100	91.667	Peromyscus_maniculatus_bairdii
ENSODEG00000019708	-	89	85.446	ENSPEMG00000013920	-	100	84.167	Peromyscus_maniculatus_bairdii
ENSODEG00000019708	-	76	97.238	ENSPCIG00000004699	-	67	94.787	Phascolarctos_cinereus
ENSODEG00000019708	-	73	93.064	ENSPMEG00000020674	SNRPN	69	92.857	Poecilia_mexicana
ENSODEG00000019708	-	89	99.061	ENSPPYG00000006269	SNURF	100	95.833	Pongo_abelii
ENSODEG00000019708	-	99	96.596	ENSPCOG00000014231	SNRPN	100	95.833	Propithecus_coquereli
ENSODEG00000019708	-	89	99.061	ENSRNOG00000059764	Snrpn	100	95.833	Rattus_norvegicus
ENSODEG00000019708	-	95	99.559	ENSRBIG00000041765	SNRPN	100	95.833	Rhinopithecus_bieti
ENSODEG00000019708	-	95	99.559	ENSRROG00000035157	SNRPN	100	95.833	Rhinopithecus_roxellana
ENSODEG00000019708	-	93	97.738	ENSSBOG00000024929	-	100	94.583	Saimiri_boliviensis_boliviensis
ENSODEG00000019708	-	95	99.559	ENSSBOG00000000110	-	100	95.833	Saimiri_boliviensis_boliviensis
ENSODEG00000019708	-	76	97.238	ENSSHAG00000010257	-	86	94.787	Sarcophilus_harrisii
ENSODEG00000019708	-	92	76.256	ENSSARG00000000072	SNRPN	78	100.000	Sorex_araneus
ENSODEG00000019708	-	96	99.123	ENSSSCG00000028124	SNRPN	98	99.123	Sus_scrofa
ENSODEG00000019708	-	93	98.643	ENSTTRG00000010966	SNRPN	89	95.417	Tursiops_truncatus
ENSODEG00000019708	-	94	98.661	ENSUAMG00000016284	SNRPN	78	98.661	Ursus_americanus
ENSODEG00000019708	-	93	98.643	ENSUMAG00000025589	SNRPN	100	95.417	Ursus_maritimus
ENSODEG00000019708	-	97	98.261	ENSVVUG00000017971	SNRPN	94	98.261	Vulpes_vulpes