EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019784 (Gene tree)
Gene ID: 101563516
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerases I%2C II%2C and III subunit RPABC4
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 177 bases
Position: chrJH651565.1:4940110-4940286
Accession: 101563516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026365	DNA_RNApol_7kD	PF03604.13	2.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026849	-	177	XM_004632637	ENSODEP00000026365	58 (aa)	XP_004632694	UPI000333853F

Gene Model

Click here to download ENSODEG00000019784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019784	-	98	94.737	ENSODEG00000019324	-	98	94.737
ENSODEG00000019784	-	100	91.379	ENSODEG00000020129	-	100	91.379
ENSODEG00000019784	-	100	96.552	ENSODEG00000020322	-	100	96.552
ENSODEG00000019784	-	100	100.000	ENSODEG00000004358	-	100	100.000
ENSODEG00000019784	-	100	98.276	ENSODEG00000018618	-	100	98.276

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019784	-	100	98.276	ENSG00000147669	POLR2K	100	98.276	Homo_sapiens
ENSODEG00000019784	-	100	98.276	ENSAMEG00000000452	POLR2K	100	98.276	Ailuropoda_melanoleuca
ENSODEG00000019784	-	100	93.103	ENSAPEG00000010759	polr2k	100	93.103	Amphiprion_percula
ENSODEG00000019784	-	100	93.103	ENSATEG00000013218	polr2k	100	93.103	Anabas_testudineus
ENSODEG00000019784	-	100	91.379	ENSACAG00000020961	POLR2K	100	91.379	Anolis_carolinensis
ENSODEG00000019784	-	98	91.228	ENSANAG00000030159	-	100	91.228	Aotus_nancymaae
ENSODEG00000019784	-	100	98.276	ENSANAG00000031482	-	100	98.276	Aotus_nancymaae
ENSODEG00000019784	-	100	68.333	ENSAMXG00000038868	-	100	68.333	Astyanax_mexicanus
ENSODEG00000019784	-	100	98.276	ENSBTAG00000022539	POLR2K	100	98.276	Bos_taurus
ENSODEG00000019784	-	74	90.698	ENSBTAG00000052277	-	63	90.698	Bos_taurus
ENSODEG00000019784	-	100	98.276	ENSCJAG00000041308	-	82	98.276	Callithrix_jacchus
ENSODEG00000019784	-	100	98.276	ENSCJAG00000022168	-	100	98.276	Callithrix_jacchus
ENSODEG00000019784	-	100	94.828	ENSCAFG00000032117	POLR2K	100	94.828	Canis_familiaris
ENSODEG00000019784	-	100	94.828	ENSCAFG00020023694	-	100	94.828	Canis_lupus_dingo
ENSODEG00000019784	-	100	89.062	ENSCAFG00020011172	-	100	89.062	Canis_lupus_dingo
ENSODEG00000019784	-	100	98.276	ENSCAFG00020000296	-	100	98.276	Canis_lupus_dingo
ENSODEG00000019784	-	100	98.276	ENSCHIG00000012813	POLR2K	100	98.276	Capra_hircus
ENSODEG00000019784	-	100	98.276	ENSCHIG00000007790	-	100	98.276	Capra_hircus
ENSODEG00000019784	-	100	94.828	ENSTSYG00000035576	-	100	94.828	Carlito_syrichta
ENSODEG00000019784	-	98	94.737	ENSTSYG00000032761	-	100	94.737	Carlito_syrichta
ENSODEG00000019784	-	83	100.000	ENSCAPG00000017627	POLR2K	100	100.000	Cavia_aperea
ENSODEG00000019784	-	100	98.276	ENSCPOG00000036717	POLR2K	100	98.276	Cavia_porcellus
ENSODEG00000019784	-	98	94.737	ENSCCAG00000002072	-	100	94.737	Cebus_capucinus
ENSODEG00000019784	-	100	98.276	ENSCCAG00000004867	-	100	98.276	Cebus_capucinus
ENSODEG00000019784	-	100	98.276	ENSCCAG00000019633	-	100	98.276	Cebus_capucinus
ENSODEG00000019784	-	100	98.276	ENSCATG00000007143	POLR2K	100	98.276	Cercocebus_atys
ENSODEG00000019784	-	100	100.000	ENSCLAG00000010033	POLR2K	100	100.000	Chinchilla_lanigera
ENSODEG00000019784	-	100	98.276	ENSCSAG00000012163	POLR2K	100	98.276	Chlorocebus_sabaeus
ENSODEG00000019784	-	100	87.931	ENSCHOG00000000784	-	100	87.931	Choloepus_hoffmanni
ENSODEG00000019784	-	88	94.118	ENSCHOG00000008820	-	100	94.118	Choloepus_hoffmanni
ENSODEG00000019784	-	100	98.276	ENSCHOG00000003599	POLR2K	100	98.276	Choloepus_hoffmanni
ENSODEG00000019784	-	100	98.276	ENSCANG00000041713	POLR2K	100	98.276	Colobus_angolensis_palliatus
ENSODEG00000019784	-	100	96.552	ENSCGRG00000011617	Polr2k	100	96.552	Cricetulus_griseus_crigri
ENSODEG00000019784	-	100	91.379	ENSCSEG00000017377	polr2k	100	91.379	Cynoglossus_semilaevis
ENSODEG00000019784	-	100	93.103	ENSCVAG00000022985	-	100	93.103	Cyprinodon_variegatus
ENSODEG00000019784	-	100	93.103	ENSCVAG00000005198	polr2k	100	93.103	Cyprinodon_variegatus
ENSODEG00000019784	-	100	93.103	ENSDARG00000075616	polr2k	100	93.103	Danio_rerio
ENSODEG00000019784	-	100	94.828	ENSDNOG00000047079	-	100	94.828	Dasypus_novemcinctus
ENSODEG00000019784	-	100	96.552	ENSDNOG00000030774	-	100	96.552	Dasypus_novemcinctus
ENSODEG00000019784	-	100	98.276	ENSDNOG00000049353	-	100	98.276	Dasypus_novemcinctus
ENSODEG00000019784	-	100	86.207	ENSDNOG00000038181	-	66	86.207	Dasypus_novemcinctus
ENSODEG00000019784	-	100	96.552	ENSDORG00000028386	Polr2k	100	96.552	Dipodomys_ordii
ENSODEG00000019784	-	81	82.979	FBgn0262954	Rpb12	82	82.979	Drosophila_melanogaster
ENSODEG00000019784	-	100	98.276	ENSEASG00005002840	-	100	98.276	Equus_asinus_asinus
ENSODEG00000019784	-	86	72.000	ENSEASG00005016441	-	51	72.000	Equus_asinus_asinus
ENSODEG00000019784	-	100	98.276	ENSECAG00000021345	POLR2K	100	98.276	Equus_caballus
ENSODEG00000019784	-	98	82.456	ENSECAG00000029464	-	72	82.456	Equus_caballus
ENSODEG00000019784	-	88	92.157	ENSEEUG00000015727	POLR2K	100	92.157	Erinaceus_europaeus
ENSODEG00000019784	-	100	94.828	ENSFALG00000005795	POLR2K	100	94.828	Ficedula_albicollis
ENSODEG00000019784	-	100	98.276	ENSFDAG00000000348	POLR2K	100	98.276	Fukomys_damarensis
ENSODEG00000019784	-	88	86.275	ENSFDAG00000018794	-	100	86.275	Fukomys_damarensis
ENSODEG00000019784	-	98	66.667	ENSFHEG00000019707	-	93	66.667	Fundulus_heteroclitus
ENSODEG00000019784	-	100	93.103	ENSGAFG00000010349	polr2k	100	93.103	Gambusia_affinis
ENSODEG00000019784	-	100	94.828	ENSGAGG00000009919	POLR2K	100	94.828	Gopherus_agassizii
ENSODEG00000019784	-	100	98.276	ENSGGOG00000024539	POLR2K	100	98.276	Gorilla_gorilla
ENSODEG00000019784	-	91	83.019	ENSGGOG00000015089	-	96	83.019	Gorilla_gorilla
ENSODEG00000019784	-	100	94.828	ENSHBUG00000002269	polr2k	100	94.828	Haplochromis_burtoni
ENSODEG00000019784	-	98	94.737	ENSHGLG00000021192	-	98	94.737	Heterocephalus_glaber_female
ENSODEG00000019784	-	100	98.276	ENSHGLG00000004285	POLR2K	100	98.276	Heterocephalus_glaber_female
ENSODEG00000019784	-	100	98.276	ENSHGLG00100005467	POLR2K	100	98.276	Heterocephalus_glaber_male
ENSODEG00000019784	-	100	87.931	ENSHCOG00000016287	polr2k	100	87.931	Hippocampus_comes
ENSODEG00000019784	-	81	95.745	ENSSTOG00000032566	-	96	95.745	Ictidomys_tridecemlineatus
ENSODEG00000019784	-	100	98.276	ENSSTOG00000006123	-	100	98.276	Ictidomys_tridecemlineatus
ENSODEG00000019784	-	97	83.929	ENSJJAG00000016100	-	88	83.929	Jaculus_jaculus
ENSODEG00000019784	-	98	84.211	ENSJJAG00000012986	-	98	84.211	Jaculus_jaculus
ENSODEG00000019784	-	95	87.273	ENSJJAG00000000698	-	95	87.273	Jaculus_jaculus
ENSODEG00000019784	-	100	96.552	ENSJJAG00000014209	-	100	96.552	Jaculus_jaculus
ENSODEG00000019784	-	100	96.552	ENSJJAG00000000271	-	100	96.552	Jaculus_jaculus
ENSODEG00000019784	-	100	94.828	ENSKMAG00000007731	polr2k	100	94.828	Kryptolebias_marmoratus
ENSODEG00000019784	-	100	94.828	ENSKMAG00000016379	-	100	94.828	Kryptolebias_marmoratus
ENSODEG00000019784	-	100	91.379	ENSLBEG00000027114	polr2k	100	91.379	Labrus_bergylta
ENSODEG00000019784	-	100	91.525	ENSLACG00000015753	POLR2K	100	91.525	Latimeria_chalumnae
ENSODEG00000019784	-	100	93.103	ENSLOCG00000009730	polr2k	100	93.103	Lepisosteus_oculatus
ENSODEG00000019784	-	98	92.982	ENSLAFG00000005254	-	100	92.982	Loxodonta_africana
ENSODEG00000019784	-	100	98.276	ENSMFAG00000030863	-	100	98.276	Macaca_fascicularis
ENSODEG00000019784	-	98	65.217	ENSMFAG00000039166	-	100	68.116	Macaca_fascicularis
ENSODEG00000019784	-	98	85.965	ENSMMUG00000040264	-	100	85.965	Macaca_mulatta
ENSODEG00000019784	-	100	98.276	ENSMMUG00000020714	-	100	98.276	Macaca_mulatta
ENSODEG00000019784	-	98	63.768	ENSMNEG00000033552	-	100	68.116	Macaca_nemestrina
ENSODEG00000019784	-	100	98.276	ENSMNEG00000023503	-	100	98.276	Macaca_nemestrina
ENSODEG00000019784	-	93	83.333	ENSMLEG00000012572	-	79	83.333	Mandrillus_leucophaeus
ENSODEG00000019784	-	100	98.276	ENSMLEG00000038200	POLR2K	100	98.276	Mandrillus_leucophaeus
ENSODEG00000019784	-	100	94.828	ENSMAMG00000014290	polr2k	100	94.828	Mastacembelus_armatus
ENSODEG00000019784	-	100	94.828	ENSMZEG00005003220	polr2k	100	94.828	Maylandia_zebra
ENSODEG00000019784	-	100	98.276	ENSMAUG00000010288	Polr2k	100	98.276	Mesocricetus_auratus
ENSODEG00000019784	-	100	98.276	ENSMICG00000044624	POLR2K	100	98.276	Microcebus_murinus
ENSODEG00000019784	-	100	98.276	ENSMOCG00000009880	Polr2k	100	98.276	Microtus_ochrogaster
ENSODEG00000019784	-	100	93.103	ENSMMOG00000017945	polr2k	100	93.103	Mola_mola
ENSODEG00000019784	-	100	96.552	ENSMODG00000006312	POLR2K	100	96.552	Monodelphis_domestica
ENSODEG00000019784	-	100	96.552	MGP_CAROLIEiJ_G0019735	Polr2k	100	96.552	Mus_caroli
ENSODEG00000019784	-	100	96.552	ENSMUSG00000045996	Polr2k	100	96.552	Mus_musculus
ENSODEG00000019784	-	100	96.552	MGP_PahariEiJ_G0019744	-	100	96.552	Mus_pahari
ENSODEG00000019784	-	100	94.828	MGP_SPRETEiJ_G0020631	Polr2k	100	94.828	Mus_spretus
ENSODEG00000019784	-	98	89.474	ENSMLUG00000029803	-	100	89.474	Myotis_lucifugus
ENSODEG00000019784	-	100	94.828	ENSMLUG00000030053	-	100	94.828	Myotis_lucifugus
ENSODEG00000019784	-	100	98.276	ENSNGAG00000020950	Polr2k	100	98.276	Nannospalax_galili
ENSODEG00000019784	-	100	94.828	ENSNBRG00000013533	polr2k	100	94.828	Neolamprologus_brichardi
ENSODEG00000019784	-	91	83.019	ENSNLEG00000018544	-	96	83.019	Nomascus_leucogenys
ENSODEG00000019784	-	91	94.340	ENSNLEG00000031897	-	69	94.340	Nomascus_leucogenys
ENSODEG00000019784	-	100	98.276	ENSMEUG00000000401	POLR2K	100	98.276	Notamacropus_eugenii
ENSODEG00000019784	-	100	86.207	ENSOPRG00000005504	-	100	86.207	Ochotona_princeps
ENSODEG00000019784	-	100	86.207	ENSOPRG00000015675	-	100	86.207	Ochotona_princeps
ENSODEG00000019784	-	100	98.276	ENSOPRG00000009562	-	100	98.276	Ochotona_princeps
ENSODEG00000019784	-	100	79.310	ENSOPRG00000010172	-	100	79.310	Ochotona_princeps
ENSODEG00000019784	-	100	96.552	ENSOCUG00000029376	-	100	96.552	Oryctolagus_cuniculus
ENSODEG00000019784	-	100	94.828	ENSOCUG00000016854	-	100	94.828	Oryctolagus_cuniculus
ENSODEG00000019784	-	100	93.103	ENSORLG00015010501	polr2k	100	93.103	Oryzias_latipes_hsok
ENSODEG00000019784	-	100	98.276	ENSOARG00000001480	POLR2K	100	98.276	Ovis_aries
ENSODEG00000019784	-	100	98.276	ENSPPAG00000040441	POLR2K	100	98.276	Pan_paniscus
ENSODEG00000019784	-	100	98.276	ENSPTRG00000020470	POLR2K	100	98.276	Pan_troglodytes
ENSODEG00000019784	-	100	98.276	ENSPANG00000011129	-	100	98.276	Papio_anubis
ENSODEG00000019784	-	100	94.828	ENSPSIG00000004097	POLR2K	100	94.828	Pelodiscus_sinensis
ENSODEG00000019784	-	100	94.828	ENSPMGG00000022982	polr2k	100	94.828	Periophthalmus_magnuspinnatus
ENSODEG00000019784	-	100	84.483	ENSPEMG00000001038	-	72	84.483	Peromyscus_maniculatus_bairdii
ENSODEG00000019784	-	100	98.276	ENSPEMG00000012015	-	100	98.276	Peromyscus_maniculatus_bairdii
ENSODEG00000019784	-	100	91.379	ENSPEMG00000008788	-	100	91.379	Peromyscus_maniculatus_bairdii
ENSODEG00000019784	-	100	93.103	ENSPMEG00000022211	polr2k	100	93.103	Poecilia_mexicana
ENSODEG00000019784	-	100	98.276	ENSPPYG00000018786	POLR2K	100	98.276	Pongo_abelii
ENSODEG00000019784	-	100	96.552	ENSPCAG00000000746	POLR2K	100	96.552	Procavia_capensis
ENSODEG00000019784	-	100	96.552	ENSPCOG00000026981	-	100	96.552	Propithecus_coquereli
ENSODEG00000019784	-	100	94.828	ENSPCOG00000007173	-	100	94.828	Propithecus_coquereli
ENSODEG00000019784	-	100	98.276	ENSPVAG00000009991	POLR2K	100	98.276	Pteropus_vampyrus
ENSODEG00000019784	-	100	94.828	ENSPNYG00000012241	polr2k	100	94.828	Pundamilia_nyererei
ENSODEG00000019784	-	100	98.276	ENSRNOG00000010408	Polr2k	100	98.276	Rattus_norvegicus
ENSODEG00000019784	-	98	82.456	ENSRBIG00000032617	-	80	82.456	Rhinopithecus_bieti
ENSODEG00000019784	-	100	98.276	ENSRBIG00000035082	POLR2K	100	98.276	Rhinopithecus_bieti
ENSODEG00000019784	-	98	82.456	ENSRROG00000036861	-	80	82.456	Rhinopithecus_roxellana
ENSODEG00000019784	-	100	98.276	ENSRROG00000043844	-	100	98.276	Rhinopithecus_roxellana
ENSODEG00000019784	-	100	98.276	ENSSBOG00000010968	-	100	98.276	Saimiri_boliviensis_boliviensis
ENSODEG00000019784	-	100	74.138	ENSSBOG00000028601	-	100	74.138	Saimiri_boliviensis_boliviensis
ENSODEG00000019784	-	100	96.552	ENSSBOG00000019574	-	100	96.552	Saimiri_boliviensis_boliviensis
ENSODEG00000019784	-	100	98.276	ENSSHAG00000006381	POLR2K	100	98.276	Sarcophilus_harrisii
ENSODEG00000019784	-	100	93.103	ENSSFOG00015002881	polr2k	100	93.103	Scleropages_formosus
ENSODEG00000019784	-	100	94.828	ENSSMAG00000007196	polr2k	100	94.828	Scophthalmus_maximus
ENSODEG00000019784	-	100	94.828	ENSSLDG00000013975	polr2k	100	94.828	Seriola_lalandi_dorsalis
ENSODEG00000019784	-	88	98.039	ENSSARG00000001557	POLR2K	100	98.039	Sorex_araneus
ENSODEG00000019784	-	100	96.552	ENSSPUG00000018205	POLR2K	100	96.552	Sphenodon_punctatus
ENSODEG00000019784	-	100	89.655	ENSSSCG00000037160	-	100	89.655	Sus_scrofa
ENSODEG00000019784	-	100	98.276	ENSSSCG00000021180	POLR2K	100	98.276	Sus_scrofa
ENSODEG00000019784	-	84	95.918	ENSSSCG00000036795	-	100	95.918	Sus_scrofa
ENSODEG00000019784	-	100	94.828	ENSTGUG00000012051	-	100	94.828	Taeniopygia_guttata
ENSODEG00000019784	-	100	94.828	ENSTGUG00000018366	-	100	94.828	Taeniopygia_guttata
ENSODEG00000019784	-	100	98.276	ENSTBEG00000010260	-	100	98.276	Tupaia_belangeri
ENSODEG00000019784	-	98	85.965	ENSTBEG00000003799	-	98	85.965	Tupaia_belangeri
ENSODEG00000019784	-	100	98.276	ENSTTRG00000007489	POLR2K	100	98.276	Tursiops_truncatus
ENSODEG00000019784	-	95	72.727	ENSUAMG00000008073	-	77	72.727	Ursus_americanus
ENSODEG00000019784	-	100	98.276	ENSUMAG00000017508	-	100	98.276	Ursus_maritimus
ENSODEG00000019784	-	95	72.727	ENSUMAG00000021763	-	77	72.727	Ursus_maritimus
ENSODEG00000019784	-	100	98.276	ENSVPAG00000009630	POLR2K	100	98.276	Vicugna_pacos
ENSODEG00000019784	-	100	89.655	ENSXETG00000025929	polr2k	100	89.655	Xenopus_tropicalis