EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019840 (Gene tree)
Gene ID: 101579508
Gene Symbol: -
Alias: -
Full Name: ribosome-recycling factor%2C mitochondrial pseudogene
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 702 bases
Position: chrJH651531.1:7685007-7685708
Accession: 101579508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026414	RRF	PF01765.19	1.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026905	-	702	-	ENSODEP00000026414	234 (aa)	-	-

Gene Model

Click here to download ENSODEG00000019840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019840's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019840	-	100	97.009	ENSODEG00000002071	-	89	97.009

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019840	-	100	83.761	ENSG00000148187	MRRF	100	80.392	Homo_sapiens
ENSODEG00000019840	-	70	66.258	ENSAPOG00000001958	mrrf	87	58.850	Acanthochromis_polyacanthus
ENSODEG00000019840	-	100	83.761	ENSAMEG00000000756	MRRF	89	83.761	Ailuropoda_melanoleuca
ENSODEG00000019840	-	99	56.170	ENSACIG00000005017	mrrf	89	57.447	Amphilophus_citrinellus
ENSODEG00000019840	-	70	66.258	ENSAOCG00000006807	mrrf	89	57.328	Amphiprion_ocellaris
ENSODEG00000019840	-	70	66.258	ENSAPEG00000007934	mrrf	89	57.328	Amphiprion_percula
ENSODEG00000019840	-	72	66.864	ENSATEG00000019203	mrrf	77	67.222	Anabas_testudineus
ENSODEG00000019840	-	100	59.414	ENSAPLG00000014749	MRRF	89	57.322	Anas_platyrhynchos
ENSODEG00000019840	-	97	80.263	ENSANAG00000036027	-	87	80.263	Aotus_nancymaae
ENSODEG00000019840	-	99	83.691	ENSANAG00000027637	-	90	82.514	Aotus_nancymaae
ENSODEG00000019840	-	99	57.265	ENSACLG00000019898	mrrf	89	57.265	Astatotilapia_calliptera
ENSODEG00000019840	-	72	65.680	ENSAMXG00000013693	mrrf	70	66.111	Astyanax_mexicanus
ENSODEG00000019840	-	100	84.615	ENSBTAG00000018426	MRRF	75	84.615	Bos_taurus
ENSODEG00000019840	-	99	83.691	ENSCJAG00000020104	MRRF	90	81.967	Callithrix_jacchus
ENSODEG00000019840	-	100	83.761	ENSCAFG00000032643	MRRF	89	83.761	Canis_familiaris
ENSODEG00000019840	-	100	83.761	ENSCAFG00020015179	MRRF	89	83.761	Canis_lupus_dingo
ENSODEG00000019840	-	100	83.761	ENSCHIG00000026312	MRRF	89	83.761	Capra_hircus
ENSODEG00000019840	-	74	86.705	ENSTSYG00000036200	-	69	86.310	Carlito_syrichta
ENSODEG00000019840	-	100	86.325	ENSTSYG00000009925	-	93	83.422	Carlito_syrichta
ENSODEG00000019840	-	87	83.744	ENSCAPG00000008928	MRRF	88	83.744	Cavia_aperea
ENSODEG00000019840	-	100	92.735	ENSCPOG00000007351	MRRF	89	92.735	Cavia_porcellus
ENSODEG00000019840	-	99	78.448	ENSCCAG00000021452	-	87	78.448	Cebus_capucinus
ENSODEG00000019840	-	99	83.190	ENSCCAG00000035511	-	88	83.190	Cebus_capucinus
ENSODEG00000019840	-	100	81.624	ENSCATG00000044253	MRRF	93	78.610	Cercocebus_atys
ENSODEG00000019840	-	100	92.308	ENSCLAG00000013089	MRRF	89	92.308	Chinchilla_lanigera
ENSODEG00000019840	-	100	82.906	ENSCSAG00000013379	MRRF	70	82.906	Chlorocebus_sabaeus
ENSODEG00000019840	-	78	57.923	ENSCHOG00000012757	MRRF	70	57.923	Choloepus_hoffmanni
ENSODEG00000019840	-	100	61.966	ENSCPBG00000009881	MRRF	88	61.966	Chrysemys_picta_bellii
ENSODEG00000019840	-	75	35.593	ENSCING00000018180	-	67	35.762	Ciona_intestinalis
ENSODEG00000019840	-	100	82.479	ENSCANG00000030811	MRRF	92	80.978	Colobus_angolensis_palliatus
ENSODEG00000019840	-	100	80.342	ENSCGRG00001014100	Mrrf	89	80.342	Cricetulus_griseus_chok1gshd
ENSODEG00000019840	-	100	79.915	ENSCGRG00000013789	Mrrf	89	79.915	Cricetulus_griseus_crigri
ENSODEG00000019840	-	99	54.741	ENSCSEG00000017565	mrrf	88	54.741	Cynoglossus_semilaevis
ENSODEG00000019840	-	70	66.871	ENSCVAG00000012428	mrrf	89	56.410	Cyprinodon_variegatus
ENSODEG00000019840	-	72	63.905	ENSDARG00000034174	mrrf	73	63.298	Danio_rerio
ENSODEG00000019840	-	100	85.043	ENSDNOG00000039795	MRRF	89	85.043	Dasypus_novemcinctus
ENSODEG00000019840	-	100	86.325	ENSDORG00000015863	Mrrf	89	86.325	Dipodomys_ordii
ENSODEG00000019840	-	68	35.625	FBgn0035980	mRRF1	63	35.404	Drosophila_melanogaster
ENSODEG00000019840	-	100	82.906	ENSETEG00000009835	MRRF	89	82.906	Echinops_telfairi
ENSODEG00000019840	-	86	35.323	ENSEBUG00000003834	mrrf	68	36.364	Eptatretus_burgeri
ENSODEG00000019840	-	100	85.043	ENSEASG00005021081	MRRF	70	85.043	Equus_asinus_asinus
ENSODEG00000019840	-	100	85.470	ENSECAG00000025085	MRRF	70	85.470	Equus_caballus
ENSODEG00000019840	-	77	75.556	ENSEEUG00000011183	MRRF	68	75.556	Erinaceus_europaeus
ENSODEG00000019840	-	72	63.314	ENSELUG00000005852	mrrf	77	57.214	Esox_lucius
ENSODEG00000019840	-	100	85.043	ENSFCAG00000038648	MRRF	84	85.043	Felis_catus
ENSODEG00000019840	-	100	57.563	ENSFALG00000001960	MRRF	89	57.143	Ficedula_albicollis
ENSODEG00000019840	-	100	91.026	ENSFDAG00000009671	MRRF	89	91.026	Fukomys_damarensis
ENSODEG00000019840	-	70	67.485	ENSFHEG00000012439	mrrf	74	64.796	Fundulus_heteroclitus
ENSODEG00000019840	-	100	51.915	ENSGMOG00000016602	mrrf	89	51.915	Gadus_morhua
ENSODEG00000019840	-	100	57.563	ENSGALG00000001333	MRRF	89	57.563	Gallus_gallus
ENSODEG00000019840	-	70	65.031	ENSGAFG00000007759	mrrf	96	55.745	Gambusia_affinis
ENSODEG00000019840	-	97	55.702	ENSGACG00000017355	mrrf	87	56.579	Gasterosteus_aculeatus
ENSODEG00000019840	-	100	61.538	ENSGAGG00000018315	MRRF	87	61.538	Gopherus_agassizii
ENSODEG00000019840	-	100	83.761	ENSGGOG00000036258	MRRF	92	82.609	Gorilla_gorilla
ENSODEG00000019840	-	99	52.564	ENSHBUG00000015190	mrrf	89	52.564	Haplochromis_burtoni
ENSODEG00000019840	-	100	90.171	ENSHGLG00000010828	MRRF	89	90.171	Heterocephalus_glaber_female
ENSODEG00000019840	-	100	90.171	ENSHGLG00100005757	MRRF	89	90.171	Heterocephalus_glaber_male
ENSODEG00000019840	-	70	65.644	ENSHCOG00000003122	mrrf	71	65.556	Hippocampus_comes
ENSODEG00000019840	-	85	49.756	ENSIPUG00000021524	mrrf	80	49.510	Ictalurus_punctatus
ENSODEG00000019840	-	100	89.316	ENSSTOG00000012632	MRRF	89	89.316	Ictidomys_tridecemlineatus
ENSODEG00000019840	-	100	85.470	ENSJJAG00000012872	Mrrf	89	85.470	Jaculus_jaculus
ENSODEG00000019840	-	78	64.481	ENSKMAG00000010695	mrrf	71	64.481	Kryptolebias_marmoratus
ENSODEG00000019840	-	72	63.905	ENSLBEG00000023948	mrrf	69	64.444	Labrus_bergylta
ENSODEG00000019840	-	100	57.741	ENSLACG00000010290	MRRF	85	57.741	Latimeria_chalumnae
ENSODEG00000019840	-	71	69.461	ENSLOCG00000003021	mrrf	75	63.402	Lepisosteus_oculatus
ENSODEG00000019840	-	100	83.333	ENSLAFG00000012138	MRRF	89	83.333	Loxodonta_africana
ENSODEG00000019840	-	100	81.624	ENSMFAG00000044303	MRRF	93	79.144	Macaca_fascicularis
ENSODEG00000019840	-	100	81.624	ENSMMUG00000012882	MRRF	93	79.144	Macaca_mulatta
ENSODEG00000019840	-	100	82.051	ENSMNEG00000041393	MRRF	93	79.679	Macaca_nemestrina
ENSODEG00000019840	-	100	82.479	ENSMLEG00000041718	MRRF	93	79.679	Mandrillus_leucophaeus
ENSODEG00000019840	-	70	65.031	ENSMAMG00000009215	mrrf	87	56.637	Mastacembelus_armatus
ENSODEG00000019840	-	99	57.265	ENSMZEG00005017909	mrrf	89	57.265	Maylandia_zebra
ENSODEG00000019840	-	74	67.052	ENSMGAG00000007925	MRRF	83	66.071	Meleagris_gallopavo
ENSODEG00000019840	-	100	80.769	ENSMAUG00000003771	Mrrf	89	80.769	Mesocricetus_auratus
ENSODEG00000019840	-	100	85.043	ENSMICG00000016168	MRRF	92	83.152	Microcebus_murinus
ENSODEG00000019840	-	100	81.624	ENSMOCG00000018514	Mrrf	89	81.624	Microtus_ochrogaster
ENSODEG00000019840	-	77	65.556	ENSMMOG00000021317	mrrf	67	65.556	Mola_mola
ENSODEG00000019840	-	70	66.871	ENSMALG00000017787	mrrf	70	67.222	Monopterus_albus
ENSODEG00000019840	-	100	81.197	MGP_CAROLIEiJ_G0023489	Mrrf	89	81.197	Mus_caroli
ENSODEG00000019840	-	100	80.342	ENSMUSG00000026887	Mrrf	89	80.342	Mus_musculus
ENSODEG00000019840	-	100	82.479	MGP_PahariEiJ_G0024946	Mrrf	89	82.479	Mus_pahari
ENSODEG00000019840	-	100	81.197	MGP_SPRETEiJ_G0024406	Mrrf	89	81.197	Mus_spretus
ENSODEG00000019840	-	100	83.761	ENSMPUG00000007190	MRRF	89	83.761	Mustela_putorius_furo
ENSODEG00000019840	-	100	85.897	ENSMLUG00000004799	MRRF	89	85.897	Myotis_lucifugus
ENSODEG00000019840	-	100	85.043	ENSNGAG00000020224	Mrrf	89	85.043	Nannospalax_galili
ENSODEG00000019840	-	99	56.838	ENSNBRG00000021100	mrrf	89	56.838	Neolamprologus_brichardi
ENSODEG00000019840	-	100	83.761	ENSNLEG00000030419	MRRF	92	82.609	Nomascus_leucogenys
ENSODEG00000019840	-	100	61.966	ENSMEUG00000015710	MRRF	89	61.966	Notamacropus_eugenii
ENSODEG00000019840	-	99	81.974	ENSOPRG00000010395	MRRF	89	81.974	Ochotona_princeps
ENSODEG00000019840	-	99	57.265	ENSONIG00000003726	mrrf	89	57.265	Oreochromis_niloticus
ENSODEG00000019840	-	100	67.521	ENSOANG00000008199	MRRF	97	67.521	Ornithorhynchus_anatinus
ENSODEG00000019840	-	100	84.255	ENSOCUG00000008530	MRRF	89	84.255	Oryctolagus_cuniculus
ENSODEG00000019840	-	99	50.644	ENSORLG00000009966	mrrf	69	60.976	Oryzias_latipes
ENSODEG00000019840	-	99	50.644	ENSORLG00020013435	mrrf	65	60.606	Oryzias_latipes_hni
ENSODEG00000019840	-	99	51.073	ENSORLG00015001687	mrrf	66	60.479	Oryzias_latipes_hsok
ENSODEG00000019840	-	99	51.931	ENSOMEG00000001486	mrrf	89	50.431	Oryzias_melastigma
ENSODEG00000019840	-	100	84.188	ENSOGAG00000003046	MRRF	89	84.188	Otolemur_garnettii
ENSODEG00000019840	-	100	83.761	ENSOARG00000014134	MRRF	89	83.761	Ovis_aries
ENSODEG00000019840	-	100	82.906	ENSPPAG00000041496	MRRF	92	81.522	Pan_paniscus
ENSODEG00000019840	-	100	85.043	ENSPPRG00000013309	MRRF	92	83.696	Panthera_pardus
ENSODEG00000019840	-	100	85.043	ENSPTIG00000007271	MRRF	89	85.043	Panthera_tigris_altaica
ENSODEG00000019840	-	100	82.906	ENSPTRG00000021324	MRRF	92	82.065	Pan_troglodytes
ENSODEG00000019840	-	100	82.051	ENSPANG00000025844	MRRF	93	79.144	Papio_anubis
ENSODEG00000019840	-	77	60.000	ENSPKIG00000005396	mrrf	63	60.366	Paramormyrops_kingsleyae
ENSODEG00000019840	-	100	63.248	ENSPSIG00000013622	MRRF	89	63.248	Pelodiscus_sinensis
ENSODEG00000019840	-	77	65.556	ENSPMGG00000023953	mrrf	65	65.556	Periophthalmus_magnuspinnatus
ENSODEG00000019840	-	100	82.906	ENSPEMG00000012001	Mrrf	89	82.906	Peromyscus_maniculatus_bairdii
ENSODEG00000019840	-	100	73.932	ENSPCIG00000025530	MRRF	89	73.932	Phascolarctos_cinereus
ENSODEG00000019840	-	70	65.031	ENSPFOG00000019705	mrrf	89	55.319	Poecilia_formosa
ENSODEG00000019840	-	70	65.031	ENSPLAG00000005592	mrrf	89	55.319	Poecilia_latipinna
ENSODEG00000019840	-	70	65.031	ENSPMEG00000014013	mrrf	89	55.319	Poecilia_mexicana
ENSODEG00000019840	-	70	64.417	ENSPREG00000009134	mrrf	89	54.894	Poecilia_reticulata
ENSODEG00000019840	-	99	81.116	ENSPPYG00000020693	-	89	81.116	Pongo_abelii
ENSODEG00000019840	-	100	83.761	ENSPPYG00000019570	MRRF	89	83.761	Pongo_abelii
ENSODEG00000019840	-	100	82.906	ENSPCAG00000005641	MRRF	99	82.906	Procavia_capensis
ENSODEG00000019840	-	100	79.060	ENSPCOG00000012906	-	89	79.060	Propithecus_coquereli
ENSODEG00000019840	-	100	85.043	ENSPCOG00000026480	-	92	83.152	Propithecus_coquereli
ENSODEG00000019840	-	100	83.761	ENSPVAG00000000864	MRRF	89	83.761	Pteropus_vampyrus
ENSODEG00000019840	-	99	56.410	ENSPNYG00000012453	mrrf	89	56.410	Pundamilia_nyererei
ENSODEG00000019840	-	70	67.485	ENSPNAG00000017686	mrrf	72	65.574	Pygocentrus_nattereri
ENSODEG00000019840	-	100	82.906	ENSRNOG00000025997	Mrrf	89	82.906	Rattus_norvegicus
ENSODEG00000019840	-	100	82.906	ENSRBIG00000035112	MRRF	93	79.679	Rhinopithecus_bieti
ENSODEG00000019840	-	100	82.906	ENSRROG00000028983	MRRF	93	79.679	Rhinopithecus_roxellana
ENSODEG00000019840	-	99	82.759	ENSSBOG00000022727	MRRF	88	82.759	Saimiri_boliviensis_boliviensis
ENSODEG00000019840	-	100	74.359	ENSSHAG00000012469	MRRF	89	74.359	Sarcophilus_harrisii
ENSODEG00000019840	-	83	54.774	ENSSFOG00015001131	mrrf	75	55.779	Scleropages_formosus
ENSODEG00000019840	-	70	64.417	ENSSMAG00000020126	mrrf	88	54.274	Scophthalmus_maximus
ENSODEG00000019840	-	70	66.258	ENSSDUG00000016181	mrrf	73	64.894	Seriola_dumerili
ENSODEG00000019840	-	70	66.258	ENSSLDG00000016309	mrrf	73	64.894	Seriola_lalandi_dorsalis
ENSODEG00000019840	-	99	53.017	ENSSPUG00000001582	MRRF	88	52.586	Sphenodon_punctatus
ENSODEG00000019840	-	72	63.314	ENSSPAG00000005380	mrrf	87	55.804	Stegastes_partitus
ENSODEG00000019840	-	100	83.761	ENSSSCG00000005532	MRRF	89	83.761	Sus_scrofa
ENSODEG00000019840	-	80	66.310	ENSTGUG00000006813	MRRF	89	57.083	Taeniopygia_guttata
ENSODEG00000019840	-	70	36.810	ENSTRUG00000005792	mrrf	72	39.247	Takifugu_rubripes
ENSODEG00000019840	-	72	46.023	ENSTNIG00000004946	mrrf	88	42.562	Tetraodon_nigroviridis
ENSODEG00000019840	-	100	83.333	ENSTBEG00000016569	MRRF	89	83.333	Tupaia_belangeri
ENSODEG00000019840	-	74	91.860	ENSTTRG00000007123	MRRF	84	91.667	Tursiops_truncatus
ENSODEG00000019840	-	100	83.761	ENSUMAG00000003435	MRRF	90	83.761	Ursus_maritimus
ENSODEG00000019840	-	100	70.085	ENSVPAG00000008622	MRRF	89	70.085	Vicugna_pacos
ENSODEG00000019840	-	100	82.479	ENSVVUG00000009449	MRRF	69	82.479	Vulpes_vulpes
ENSODEG00000019840	-	72	64.497	ENSXETG00000016327	mrrf	71	65.000	Xenopus_tropicalis
ENSODEG00000019840	-	70	65.031	ENSXCOG00000005067	mrrf	88	56.223	Xiphophorus_couchianus
ENSODEG00000019840	-	70	65.031	ENSXMAG00000023463	mrrf	89	55.696	Xiphophorus_maculatus