EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019880 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 543 bases
Position: chrJH651628.1:589221-589763
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026449	MMR_HSR1	PF01926.23	8.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000026945	-	543	-	ENSODEP00000026449	180 (aa)	-	-

Gene Model

Click here to download ENSODEG00000019880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019880	-	96	33.333	ENSODEG00000009293	ARL8B	87	31.056
ENSODEG00000019880	-	99	57.222	ENSODEG00000011800	ARF5	89	59.006
ENSODEG00000019880	-	99	98.333	ENSODEG00000010531	-	100	98.333
ENSODEG00000019880	-	87	35.897	ENSODEG00000008664	-	84	35.897
ENSODEG00000019880	-	94	36.364	ENSODEG00000000685	ARL6	88	37.423
ENSODEG00000019880	-	100	98.343	ENSODEG00000019783	-	100	98.343
ENSODEG00000019880	-	99	47.486	ENSODEG00000019939	-	90	50.311
ENSODEG00000019880	-	63	32.283	ENSODEG00000000054	RAB22A	61	32.283
ENSODEG00000019880	-	99	47.486	ENSODEG00000013924	ARL5B	89	50.311
ENSODEG00000019880	-	99	47.486	ENSODEG00000003628	-	90	50.311
ENSODEG00000019880	-	97	39.560	ENSODEG00000006469	ARL4A	84	39.881
ENSODEG00000019880	-	100	55.801	ENSODEG00000000958	-	92	56.627
ENSODEG00000019880	-	97	39.560	ENSODEG00000019848	-	80	39.881
ENSODEG00000019880	-	96	33.333	ENSODEG00000011676	ARL8A	87	31.677
ENSODEG00000019880	-	100	53.591	ENSODEG00000007639	-	91	53.614
ENSODEG00000019880	-	98	33.158	ENSODEG00000006629	ARFRP1	84	34.503
ENSODEG00000019880	-	91	44.242	ENSODEG00000019069	-	90	44.242
ENSODEG00000019880	-	82	32.667	ENSODEG00000009842	ARL10	60	32.667
ENSODEG00000019880	-	100	40.957	ENSODEG00000019668	ARL4C	88	41.667
ENSODEG00000019880	-	99	38.547	ENSODEG00000000430	-	89	40.994
ENSODEG00000019880	-	100	50.276	ENSODEG00000002138	-	91	50.602
ENSODEG00000019880	-	100	55.801	ENSODEG00000004009	-	92	57.229
ENSODEG00000019880	-	91	41.818	ENSODEG00000019246	-	90	41.818
ENSODEG00000019880	-	90	35.119	ENSODEG00000020552	ARL4D	85	35.119
ENSODEG00000019880	-	77	46.429	ENSODEG00000014792	ARL2-SNX15	77	46.429
ENSODEG00000019880	-	90	45.679	ENSODEG00000008389	ARL3	89	45.679

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019880	-	100	97.238	ENSG00000120805	ARL1	100	97.238	Homo_sapiens
ENSODEG00000019880	-	100	91.713	ENSAPOG00000002469	arl1	95	92.814	Acanthochromis_polyacanthus
ENSODEG00000019880	-	99	97.222	ENSAMEG00000016452	ARL1	99	97.222	Ailuropoda_melanoleuca
ENSODEG00000019880	-	99	90.503	ENSACIG00000007953	arl1	93	91.018	Amphilophus_citrinellus
ENSODEG00000019880	-	100	91.713	ENSAOCG00000013008	arl1	92	92.814	Amphiprion_ocellaris
ENSODEG00000019880	-	100	91.713	ENSAPEG00000013187	arl1	95	92.814	Amphiprion_percula
ENSODEG00000019880	-	99	92.179	ENSATEG00000005559	arl1	90	92.814	Anabas_testudineus
ENSODEG00000019880	-	100	95.028	ENSAPLG00000016092	ARL1	92	95.808	Anas_platyrhynchos
ENSODEG00000019880	-	100	96.685	ENSACAG00000011602	ARL1	100	96.685	Anolis_carolinensis
ENSODEG00000019880	-	100	97.790	ENSANAG00000023491	ARL1	100	97.790	Aotus_nancymaae
ENSODEG00000019880	-	100	92.818	ENSACLG00000008188	arl1	92	93.413	Astatotilapia_calliptera
ENSODEG00000019880	-	100	93.370	ENSAMXG00000021056	arl1	96	94.012	Astyanax_mexicanus
ENSODEG00000019880	-	100	97.790	ENSBTAG00000011883	ARL1	100	97.790	Bos_taurus
ENSODEG00000019880	-	100	70.718	WBGene00000187	arl-1	93	71.856	Caenorhabditis_elegans
ENSODEG00000019880	-	100	97.790	ENSCJAG00000001966	ARL1	100	97.790	Callithrix_jacchus
ENSODEG00000019880	-	100	97.790	ENSCAFG00000006992	ARL1	100	97.790	Canis_familiaris
ENSODEG00000019880	-	100	97.790	ENSCAFG00020024333	ARL1	100	97.790	Canis_lupus_dingo
ENSODEG00000019880	-	94	97.647	ENSCHIG00000024524	ARL1	100	97.647	Capra_hircus
ENSODEG00000019880	-	99	97.765	ENSTSYG00000013257	-	100	97.765	Carlito_syrichta
ENSODEG00000019880	-	76	97.794	ENSCAPG00000001010	ARL1	99	97.794	Cavia_aperea
ENSODEG00000019880	-	100	97.790	ENSCPOG00000026014	ARL1	100	97.790	Cavia_porcellus
ENSODEG00000019880	-	100	97.790	ENSCCAG00000025938	ARL1	100	97.790	Cebus_capucinus
ENSODEG00000019880	-	100	96.685	ENSCLAG00000008180	ARL1	100	96.685	Chinchilla_lanigera
ENSODEG00000019880	-	100	97.238	ENSCSAG00000003368	ARL1	100	97.238	Chlorocebus_sabaeus
ENSODEG00000019880	-	100	94.475	ENSCPBG00000004906	ARL1	92	94.611	Chrysemys_picta_bellii
ENSODEG00000019880	-	88	45.062	ENSCING00000004577	-	90	44.231	Ciona_intestinalis
ENSODEG00000019880	-	99	77.778	ENSCING00000019794	-	89	78.261	Ciona_intestinalis
ENSODEG00000019880	-	99	77.222	ENSCSAVG00000007620	-	88	77.640	Ciona_savignyi
ENSODEG00000019880	-	100	96.685	ENSCANG00000033548	ARL1	100	96.685	Colobus_angolensis_palliatus
ENSODEG00000019880	-	100	98.343	ENSCGRG00001010446	Arl1	100	98.343	Cricetulus_griseus_chok1gshd
ENSODEG00000019880	-	100	97.238	ENSCGRG00000009856	Arl1	90	97.238	Cricetulus_griseus_crigri
ENSODEG00000019880	-	100	92.265	ENSCVAG00000001731	arl1	92	92.814	Cyprinodon_variegatus
ENSODEG00000019880	-	100	93.923	ENSDARG00000101680	arl1	92	94.937	Danio_rerio
ENSODEG00000019880	-	100	97.238	ENSDORG00000014770	Arl1	95	97.238	Dipodomys_ordii
ENSODEG00000019880	-	100	77.348	FBgn0000115	Arl1	93	79.641	Drosophila_melanogaster
ENSODEG00000019880	-	98	94.944	ENSETEG00000020310	ARL1	100	94.944	Echinops_telfairi
ENSODEG00000019880	-	100	97.790	ENSEASG00005020057	ARL1	100	97.790	Equus_asinus_asinus
ENSODEG00000019880	-	100	97.790	ENSECAG00000000372	ARL1	100	97.790	Equus_caballus
ENSODEG00000019880	-	100	91.713	ENSELUG00000001287	-	92	92.216	Esox_lucius
ENSODEG00000019880	-	100	92.818	ENSELUG00000018440	arl1	92	94.012	Esox_lucius
ENSODEG00000019880	-	100	97.790	ENSFCAG00000030871	ARL1	100	97.790	Felis_catus
ENSODEG00000019880	-	100	95.580	ENSFALG00000011156	ARL1	100	95.580	Ficedula_albicollis
ENSODEG00000019880	-	100	97.238	ENSFDAG00000016393	ARL1	100	97.238	Fukomys_damarensis
ENSODEG00000019880	-	99	92.737	ENSFHEG00000004171	arl1	88	93.413	Fundulus_heteroclitus
ENSODEG00000019880	-	100	92.818	ENSGMOG00000006859	arl1	92	93.413	Gadus_morhua
ENSODEG00000019880	-	100	95.580	ENSGALG00000011651	ARL1	100	95.580	Gallus_gallus
ENSODEG00000019880	-	91	93.333	ENSGAFG00000006973	arl1	95	94.304	Gambusia_affinis
ENSODEG00000019880	-	100	91.713	ENSGACG00000019098	arl1	92	92.814	Gasterosteus_aculeatus
ENSODEG00000019880	-	100	97.238	ENSGGOG00000010788	ARL1	100	97.238	Gorilla_gorilla
ENSODEG00000019880	-	100	92.818	ENSHBUG00000010636	arl1	92	93.413	Haplochromis_burtoni
ENSODEG00000019880	-	100	98.343	ENSHGLG00000004909	ARL1	100	98.343	Heterocephalus_glaber_female
ENSODEG00000019880	-	100	97.790	ENSHGLG00100001832	ARL1	100	97.790	Heterocephalus_glaber_male
ENSODEG00000019880	-	100	93.923	ENSHCOG00000005566	arl1	92	94.012	Hippocampus_comes
ENSODEG00000019880	-	99	92.737	ENSIPUG00000013834	arl1	90	93.413	Ictalurus_punctatus
ENSODEG00000019880	-	100	97.790	ENSSTOG00000016022	ARL1	100	97.790	Ictidomys_tridecemlineatus
ENSODEG00000019880	-	92	88.024	ENSJJAG00000000452	-	92	88.024	Jaculus_jaculus
ENSODEG00000019880	-	85	95.425	ENSKMAG00000005931	arl1	83	95.425	Kryptolebias_marmoratus
ENSODEG00000019880	-	96	90.230	ENSLBEG00000000991	arl1	95	91.018	Labrus_bergylta
ENSODEG00000019880	-	100	97.790	ENSLAFG00000026143	ARL1	95	97.790	Loxodonta_africana
ENSODEG00000019880	-	100	97.238	ENSMFAG00000035725	ARL1	100	97.238	Macaca_fascicularis
ENSODEG00000019880	-	100	96.685	ENSMMUG00000031610	ARL1	100	96.685	Macaca_mulatta
ENSODEG00000019880	-	100	97.238	ENSMNEG00000007067	ARL1	100	97.238	Macaca_nemestrina
ENSODEG00000019880	-	90	97.531	ENSMLEG00000036143	ARL1	99	97.531	Mandrillus_leucophaeus
ENSODEG00000019880	-	99	90.503	ENSMAMG00000001968	arl1	93	91.018	Mastacembelus_armatus
ENSODEG00000019880	-	100	92.818	ENSMZEG00005018136	arl1	92	93.413	Maylandia_zebra
ENSODEG00000019880	-	100	95.028	ENSMGAG00000011748	ARL1	92	95.808	Meleagris_gallopavo
ENSODEG00000019880	-	100	97.790	ENSMAUG00000021923	Arl1	100	97.790	Mesocricetus_auratus
ENSODEG00000019880	-	100	97.790	ENSMICG00000015801	ARL1	100	97.790	Microcebus_murinus
ENSODEG00000019880	-	100	98.343	ENSMOCG00000005852	Arl1	100	98.343	Microtus_ochrogaster
ENSODEG00000019880	-	96	89.655	ENSMMOG00000003353	arl1	63	91.875	Mola_mola
ENSODEG00000019880	-	100	96.133	ENSMODG00000003056	ARL1	100	96.133	Monodelphis_domestica
ENSODEG00000019880	-	99	89.944	ENSMALG00000003003	arl1	98	93.210	Monopterus_albus
ENSODEG00000019880	-	100	98.343	MGP_CAROLIEiJ_G0015712	Arl1	100	98.343	Mus_caroli
ENSODEG00000019880	-	100	98.343	ENSMUSG00000060904	Arl1	100	98.343	Mus_musculus
ENSODEG00000019880	-	100	98.343	MGP_PahariEiJ_G0031373	Arl1	100	98.343	Mus_pahari
ENSODEG00000019880	-	100	98.343	MGP_SPRETEiJ_G0016530	Arl1	100	98.343	Mus_spretus
ENSODEG00000019880	-	99	97.238	ENSMPUG00000011822	ARL1	99	97.238	Mustela_putorius_furo
ENSODEG00000019880	-	92	91.617	ENSMLUG00000025321	-	92	91.617	Myotis_lucifugus
ENSODEG00000019880	-	95	97.093	ENSMLUG00000002351	-	100	97.093	Myotis_lucifugus
ENSODEG00000019880	-	76	98.529	ENSNGAG00000007879	-	99	98.529	Nannospalax_galili
ENSODEG00000019880	-	100	92.818	ENSNBRG00000019783	arl1	92	93.413	Neolamprologus_brichardi
ENSODEG00000019880	-	90	97.531	ENSNLEG00000006223	ARL1	99	97.531	Nomascus_leucogenys
ENSODEG00000019880	-	100	96.133	ENSMEUG00000015525	ARL1	95	96.133	Notamacropus_eugenii
ENSODEG00000019880	-	100	92.818	ENSONIG00000009921	arl1	92	93.413	Oreochromis_niloticus
ENSODEG00000019880	-	100	97.790	ENSOCUG00000002217	ARL1	96	97.790	Oryctolagus_cuniculus
ENSODEG00000019880	-	92	92.771	ENSORLG00000008909	arl1	93	94.304	Oryzias_latipes
ENSODEG00000019880	-	100	92.818	ENSORLG00020005754	arl1	93	93.413	Oryzias_latipes_hni
ENSODEG00000019880	-	100	92.818	ENSORLG00015002736	arl1	93	94.304	Oryzias_latipes_hsok
ENSODEG00000019880	-	96	92.529	ENSOMEG00000023497	arl1	89	93.413	Oryzias_melastigma
ENSODEG00000019880	-	100	97.238	ENSOGAG00000015144	ARL1	100	97.238	Otolemur_garnettii
ENSODEG00000019880	-	100	97.790	ENSOARG00000015007	ARL1	100	97.790	Ovis_aries
ENSODEG00000019880	-	100	97.238	ENSPPAG00000034860	ARL1	100	97.238	Pan_paniscus
ENSODEG00000019880	-	100	97.790	ENSPPRG00000023908	ARL1	100	97.790	Panthera_pardus
ENSODEG00000019880	-	99	97.765	ENSPTIG00000002154	-	100	97.765	Panthera_tigris_altaica
ENSODEG00000019880	-	100	97.238	ENSPTRG00000005350	ARL1	100	97.238	Pan_troglodytes
ENSODEG00000019880	-	100	96.685	ENSPANG00000018816	ARL1	97	97.207	Papio_anubis
ENSODEG00000019880	-	100	92.818	ENSPKIG00000007118	arl1	99	94.444	Paramormyrops_kingsleyae
ENSODEG00000019880	-	100	95.028	ENSPSIG00000006539	ARL1	92	95.808	Pelodiscus_sinensis
ENSODEG00000019880	-	91	91.515	ENSPMGG00000004070	arl1	93	92.405	Periophthalmus_magnuspinnatus
ENSODEG00000019880	-	100	98.343	ENSPEMG00000008781	Arl1	100	98.343	Peromyscus_maniculatus_bairdii
ENSODEG00000019880	-	100	88.950	ENSPMAG00000002070	arl1	92	91.617	Petromyzon_marinus
ENSODEG00000019880	-	99	96.111	ENSPCIG00000009683	-	97	96.111	Phascolarctos_cinereus
ENSODEG00000019880	-	100	92.818	ENSPFOG00000003241	arl1	92	93.413	Poecilia_formosa
ENSODEG00000019880	-	100	92.818	ENSPLAG00000012898	arl1	92	93.413	Poecilia_latipinna
ENSODEG00000019880	-	99	92.778	ENSPMEG00000005938	arl1	89	93.413	Poecilia_mexicana
ENSODEG00000019880	-	99	92.778	ENSPREG00000013361	arl1	89	93.413	Poecilia_reticulata
ENSODEG00000019880	-	100	97.238	ENSPPYG00000004872	ARL1	100	97.238	Pongo_abelii
ENSODEG00000019880	-	100	93.923	ENSPCOG00000015554	-	94	95.808	Propithecus_coquereli
ENSODEG00000019880	-	100	97.790	ENSPVAG00000008119	ARL1	95	97.790	Pteropus_vampyrus
ENSODEG00000019880	-	100	92.818	ENSPNYG00000011671	arl1	92	93.413	Pundamilia_nyererei
ENSODEG00000019880	-	91	93.333	ENSPNAG00000028795	arl1	95	94.304	Pygocentrus_nattereri
ENSODEG00000019880	-	100	98.343	ENSRNOG00000005763	Arl1	100	98.343	Rattus_norvegicus
ENSODEG00000019880	-	100	97.238	ENSRBIG00000042560	ARL1	100	97.238	Rhinopithecus_bieti
ENSODEG00000019880	-	100	97.238	ENSRROG00000037996	ARL1	100	97.238	Rhinopithecus_roxellana
ENSODEG00000019880	-	100	97.790	ENSSBOG00000024352	-	100	97.790	Saimiri_boliviensis_boliviensis
ENSODEG00000019880	-	100	95.580	ENSSHAG00000004634	ARL1	100	95.580	Sarcophilus_harrisii
ENSODEG00000019880	-	100	92.818	ENSSFOG00015001665	arl1	92	93.413	Scleropages_formosus
ENSODEG00000019880	-	100	92.265	ENSSMAG00000016416	arl1	92	92.216	Scophthalmus_maximus
ENSODEG00000019880	-	93	91.124	ENSSDUG00000013898	arl1	89	93.671	Seriola_dumerili
ENSODEG00000019880	-	100	92.265	ENSSLDG00000012946	arl1	92	92.814	Seriola_lalandi_dorsalis
ENSODEG00000019880	-	99	96.648	ENSSARG00000013944	ARL1	100	96.648	Sorex_araneus
ENSODEG00000019880	-	100	96.685	ENSSPUG00000004578	ARL1	100	96.685	Sphenodon_punctatus
ENSODEG00000019880	-	100	91.160	ENSSPAG00000014633	arl1	93	92.216	Stegastes_partitus
ENSODEG00000019880	-	100	97.790	ENSSSCG00000000870	ARL1	100	97.790	Sus_scrofa
ENSODEG00000019880	-	99	95.531	ENSTGUG00000009085	-	100	95.531	Taeniopygia_guttata
ENSODEG00000019880	-	100	90.608	ENSTRUG00000006254	arl1	92	91.018	Takifugu_rubripes
ENSODEG00000019880	-	100	90.055	ENSTNIG00000006920	arl1	92	91.018	Tetraodon_nigroviridis
ENSODEG00000019880	-	100	96.154	ENSTBEG00000015546	ARL1	100	96.154	Tupaia_belangeri
ENSODEG00000019880	-	100	97.790	ENSTTRG00000017202	ARL1	95	97.790	Tursiops_truncatus
ENSODEG00000019880	-	100	97.790	ENSUMAG00000019547	ARL1	100	97.790	Ursus_maritimus
ENSODEG00000019880	-	100	97.790	ENSVPAG00000011621	ARL1	95	97.790	Vicugna_pacos
ENSODEG00000019880	-	100	97.790	ENSVVUG00000018044	ARL1	100	97.790	Vulpes_vulpes
ENSODEG00000019880	-	92	94.611	ENSXETG00000002540	arl1	92	94.611	Xenopus_tropicalis
ENSODEG00000019880	-	99	91.061	ENSXMAG00000028338	arl1	93	91.617	Xiphophorus_maculatus