EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000019971 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Plus strand
Length
648 bases
Position
chrJH651535.1:22363057-22363704
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000026529zf-CCHCPF00098.233.6e-0511
ENSODEP00000026529RRM_5PF13893.64.4e-0811
ENSODEP00000026529RRM_1PF00076.224.7e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000027036-648-ENSODEP00000026529215 (aa)-UPI0003336E58
Gene Model
Click here to download ENSODEG00000019971's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019971's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000019971-9990.610ENSODEG00000018576-9390.610
ENSODEG00000019971-10083.256ENSODEG00000007573-10083.256
ENSODEG00000019971-8171.264ENSODEG00000000147-10071.264
ENSODEG00000019971-10088.837ENSODEG00000003051-10088.837
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000019971-10083.410ENSG00000139168ZCRB110086.466Homo_sapiens
ENSODEG00000019971-10073.991ENSAPOG00000012709zcrb110073.991Acanthochromis_polyacanthus
ENSODEG00000019971-10083.410ENSAMEG00000013837ZCRB110086.636Ailuropoda_melanoleuca
ENSODEG00000019971-10073.636ENSACIG00000015990zcrb110073.636Amphilophus_citrinellus
ENSODEG00000019971-10073.543ENSAOCG00000015798zcrb110073.543Amphiprion_ocellaris
ENSODEG00000019971-10073.543ENSAPEG00000017955zcrb110073.543Amphiprion_percula
ENSODEG00000019971-10065.116ENSATEG00000012544zcrb110064.055Anabas_testudineus
ENSODEG00000019971-10079.730ENSAPLG00000004312ZCRB110079.730Anas_platyrhynchos
ENSODEG00000019971-10078.704ENSACAG00000003172ZCRB110082.407Anolis_carolinensis
ENSODEG00000019971-10083.871ENSANAG00000020058ZCRB110086.175Aotus_nancymaae
ENSODEG00000019971-10070.588ENSACLG00000001060zcrb110072.851Astatotilapia_calliptera
ENSODEG00000019971-10073.516ENSAMXG00000033790zcrb110073.516Astyanax_mexicanus
ENSODEG00000019971-10082.488ENSBTAG00000019119ZCRB110085.714Bos_taurus
ENSODEG00000019971-10081.567ENSBTAG00000018340-10084.332Bos_taurus
ENSODEG00000019971-10083.871ENSCJAG00000017749ZCRB110086.175Callithrix_jacchus
ENSODEG00000019971-10082.488ENSCAFG00000030751ZCRB110085.714Canis_familiaris
ENSODEG00000019971-10082.488ENSCAFG00020010455ZCRB110085.714Canis_lupus_dingo
ENSODEG00000019971-10082.488ENSCHIG00000010312-10085.714Capra_hircus
ENSODEG00000019971-10076.037ENSCHIG00000012567-10079.724Capra_hircus
ENSODEG00000019971-8175.843ENSTSYG00000025575-10078.652Carlito_syrichta
ENSODEG00000019971-10083.871ENSTSYG00000010691-10086.175Carlito_syrichta
ENSODEG00000019971-9963.551ENSTSYG00000026505-9076.744Carlito_syrichta
ENSODEG00000019971-6577.857ENSCAPG00000011576-10077.857Cavia_aperea
ENSODEG00000019971-10092.093ENSCPOG00000031127ZCRB110092.093Cavia_porcellus
ENSODEG00000019971-8085.632ENSCCAG00000032546-8888.506Cebus_capucinus
ENSODEG00000019971-6092.969ENSCCAG00000035450-8192.366Cebus_capucinus
ENSODEG00000019971-6376.978ENSCCAG00000021693-8774.483Cebus_capucinus
ENSODEG00000019971-10082.488ENSCATG00000028610ZCRB110084.793Cercocebus_atys
ENSODEG00000019971-10090.698ENSCLAG00000002653ZCRB110090.698Chinchilla_lanigera
ENSODEG00000019971-10083.871ENSCSAG00000007086ZCRB110086.175Chlorocebus_sabaeus
ENSODEG00000019971-10064.516ENSCHOG00000004490ZCRB110067.742Choloepus_hoffmanni
ENSODEG00000019971-9781.043ENSCPBG00000015507ZCRB19881.517Chrysemys_picta_bellii
ENSODEG00000019971-9949.321ENSCING00000017297-9949.321Ciona_intestinalis
ENSODEG00000019971-8445.745ENSCSAVG00000010693-9945.745Ciona_savignyi
ENSODEG00000019971-10083.871ENSCANG00000042161ZCRB110086.175Colobus_angolensis_palliatus
ENSODEG00000019971-10085.648ENSCGRG00001023392Zcrb110085.648Cricetulus_griseus_chok1gshd
ENSODEG00000019971-10085.648ENSCGRG00000004778Zcrb110085.648Cricetulus_griseus_crigri
ENSODEG00000019971-10072.146ENSCSEG00000010498zcrb110072.146Cynoglossus_semilaevis
ENSODEG00000019971-10072.727ENSCVAG00000001057zcrb110072.727Cyprinodon_variegatus
ENSODEG00000019971-10071.233ENSDARG00000045691zcrb110072.146Danio_rerio
ENSODEG00000019971-6089.147ENSDNOG00000049476-10083.750Dasypus_novemcinctus
ENSODEG00000019971-6562.411ENSDNOG00000038480-9566.667Dasypus_novemcinctus
ENSODEG00000019971-10080.645ENSDNOG00000048722-10083.410Dasypus_novemcinctus
ENSODEG00000019971-8185.143ENSDORG00000025789-10085.143Dipodomys_ordii
ENSODEG00000019971-10057.870ENSDORG00000026623-10061.574Dipodomys_ordii
ENSODEG00000019971-10076.037ENSETEG00000019302ZCRB110078.341Echinops_telfairi
ENSODEG00000019971-9966.972ENSEBUG00000010289zcrb19966.972Eptatretus_burgeri
ENSODEG00000019971-10085.714ENSEASG00005023491ZCRB19386.175Equus_asinus_asinus
ENSODEG00000019971-10085.714ENSECAG00000012174ZCRB110086.175Equus_caballus
ENSODEG00000019971-10077.778ENSEEUG00000000397ZCRB110079.724Erinaceus_europaeus
ENSODEG00000019971-10073.423ENSELUG00000020877zcrb110073.423Esox_lucius
ENSODEG00000019971-10082.949ENSFCAG00000014760-10086.175Felis_catus
ENSODEG00000019971-5177.982ENSFCAG00000035062-7077.982Felis_catus
ENSODEG00000019971-10082.407ENSFALG00000010262ZCRB110082.407Ficedula_albicollis
ENSODEG00000019971-10064.352ENSFDAG00000003663-10063.426Fukomys_damarensis
ENSODEG00000019971-10088.837ENSFDAG00000013019-10088.837Fukomys_damarensis
ENSODEG00000019971-10070.233ENSFDAG00000004074-10071.628Fukomys_damarensis
ENSODEG00000019971-10073.182ENSFHEG00000007426zcrb110073.182Fundulus_heteroclitus
ENSODEG00000019971-10069.027ENSGMOG00000018788zcrb110069.027Gadus_morhua
ENSODEG00000019971-10081.944ENSGALG00000009544ZCRB110081.944Gallus_gallus
ENSODEG00000019971-10069.027ENSGAFG00000017414zcrb110071.364Gambusia_affinis
ENSODEG00000019971-10069.820ENSGACG00000018860zcrb110069.820Gasterosteus_aculeatus
ENSODEG00000019971-10082.488ENSGAGG00000008782ZCRB110082.949Gopherus_agassizii
ENSODEG00000019971-10083.410ENSGGOG00000015647ZCRB110085.714Gorilla_gorilla
ENSODEG00000019971-10065.741ENSGGOG00000043362-10069.714Gorilla_gorilla
ENSODEG00000019971-10070.136ENSHBUG00000006367zcrb110072.398Haplochromis_burtoni
ENSODEG00000019971-10072.558ENSHGLG00000008186-10072.558Heterocephalus_glaber_female
ENSODEG00000019971-10073.953ENSHGLG00000006280-10078.140Heterocephalus_glaber_female
ENSODEG00000019971-10074.419ENSHGLG00000006122-10074.419Heterocephalus_glaber_female
ENSODEG00000019971-10082.791ENSHGLG00000007867-10082.791Heterocephalus_glaber_female
ENSODEG00000019971-10088.837ENSHGLG00000001325-10088.837Heterocephalus_glaber_female
ENSODEG00000019971-8178.736ENSHGLG00100015818-10079.310Heterocephalus_glaber_male
ENSODEG00000019971-10085.116ENSHGLG00100019510-10085.116Heterocephalus_glaber_male
ENSODEG00000019971-8175.287ENSHGLG00100012132-10076.437Heterocephalus_glaber_male
ENSODEG00000019971-10073.488ENSHGLG00100009473-10073.488Heterocephalus_glaber_male
ENSODEG00000019971-9762.441ENSHGLG00100017475-10062.441Heterocephalus_glaber_male
ENSODEG00000019971-10073.953ENSHGLG00100012202-10078.140Heterocephalus_glaber_male
ENSODEG00000019971-10068.018ENSHCOG00000009098zcrb110072.523Hippocampus_comes
ENSODEG00000019971-6076.562ENSIPUG00000017007zcrb19276.336Ictalurus_punctatus
ENSODEG00000019971-10083.871ENSSTOG00000023833-10086.636Ictidomys_tridecemlineatus
ENSODEG00000019971-8084.483ENSSTOG00000034477-10088.506Ictidomys_tridecemlineatus
ENSODEG00000019971-10082.488ENSJJAG00000021636-10084.793Jaculus_jaculus
ENSODEG00000019971-10071.628ENSJJAG00000023083-10072.093Jaculus_jaculus
ENSODEG00000019971-8175.706ENSJJAG00000012365-9878.531Jaculus_jaculus
ENSODEG00000019971-8166.857ENSJJAG00000020804-10068.571Jaculus_jaculus
ENSODEG00000019971-10073.636ENSKMAG00000012448zcrb110073.636Kryptolebias_marmoratus
ENSODEG00000019971-10070.089ENSLBEG00000004257zcrb110070.536Labrus_bergylta
ENSODEG00000019971-10055.046ENSLACG00000007970ZCRB110057.798Latimeria_chalumnae
ENSODEG00000019971-10073.516ENSLOCG00000001409zcrb110076.712Lepisosteus_oculatus
ENSODEG00000019971-10079.263ENSLAFG00000008847ZCRB110083.871Loxodonta_africana
ENSODEG00000019971-8782.540ENSMFAG00000039789ZCRB110085.185Macaca_fascicularis
ENSODEG00000019971-6070.543ENSMFAG00000030462-7969.697Macaca_fascicularis
ENSODEG00000019971-10082.949ENSMFAG00000005490-10085.253Macaca_fascicularis
ENSODEG00000019971-8181.250ENSMMUG00000017319ZCRB110084.091Macaca_mulatta
ENSODEG00000019971-9963.380ENSMMUG00000041598-9963.380Macaca_mulatta
ENSODEG00000019971-6193.893ENSMNEG00000041890-8993.893Macaca_nemestrina
ENSODEG00000019971-10082.028ENSMNEG00000001077-10084.332Macaca_nemestrina
ENSODEG00000019971-9963.380ENSMNEG00000032137-9962.911Macaca_nemestrina
ENSODEG00000019971-9962.441ENSMLEG00000034590-9962.441Mandrillus_leucophaeus
ENSODEG00000019971-10083.871ENSMLEG00000042951ZCRB110086.175Mandrillus_leucophaeus
ENSODEG00000019971-10071.041ENSMAMG00000009034zcrb110071.493Mastacembelus_armatus
ENSODEG00000019971-10070.588ENSMZEG00005010889zcrb110072.851Maylandia_zebra
ENSODEG00000019971-10077.419ENSMGAG00000009450ZCRB110081.567Meleagris_gallopavo
ENSODEG00000019971-10085.185ENSMAUG00000009266Zcrb110085.185Mesocricetus_auratus
ENSODEG00000019971-10082.949ENSMICG00000017422-10086.175Microcebus_murinus
ENSODEG00000019971-10071.429ENSMICG00000026774-10074.654Microcebus_murinus
ENSODEG00000019971-10081.567ENSMOCG00000011009Zcrb110083.871Microtus_ochrogaster
ENSODEG00000019971-10070.507ENSMMOG00000002395zcrb110070.507Mola_mola
ENSODEG00000019971-10081.106ENSMODG00000006493-10081.567Monodelphis_domestica
ENSODEG00000019971-9270.854ENSMODG00000008893-9473.869Monodelphis_domestica
ENSODEG00000019971-10072.146ENSMALG00000016907zcrb18573.059Monopterus_albus
ENSODEG00000019971-10081.106MGP_CAROLIEiJ_G0020191Zcrb110084.332Mus_caroli
ENSODEG00000019971-10081.106ENSMUSG00000022635Zcrb110084.332Mus_musculus
ENSODEG00000019971-10082.488MGP_PahariEiJ_G0020195Zcrb110084.793Mus_pahari
ENSODEG00000019971-10081.106MGP_SPRETEiJ_G0021087Zcrb110084.332Mus_spretus
ENSODEG00000019971-10082.949ENSMPUG00000000327-10086.175Mustela_putorius_furo
ENSODEG00000019971-10061.062ENSMPUG00000005129-10064.317Mustela_putorius_furo
ENSODEG00000019971-10078.636ENSMPUG00000000901-10081.364Mustela_putorius_furo
ENSODEG00000019971-10081.019ENSMLUG00000026012-10082.870Myotis_lucifugus
ENSODEG00000019971-10079.724ENSMLUG00000029416-10082.949Myotis_lucifugus
ENSODEG00000019971-10082.488ENSMLUG00000001332-10085.714Myotis_lucifugus
ENSODEG00000019971-10082.028ENSNGAG00000020193Zcrb110084.332Nannospalax_galili
ENSODEG00000019971-10073.516ENSNBRG00000001430zcrb110073.516Neolamprologus_brichardi
ENSODEG00000019971-10083.871ENSNLEG00000017944ZCRB110086.175Nomascus_leucogenys
ENSODEG00000019971-8277.095ENSMEUG00000003563ZCRB110080.447Notamacropus_eugenii
ENSODEG00000019971-8782.011ENSOPRG00000011095ZCRB110082.540Ochotona_princeps
ENSODEG00000019971-10073.423ENSONIG00000016844zcrb110072.973Oreochromis_niloticus
ENSODEG00000019971-10078.341ENSOANG00000009891ZCRB110082.028Ornithorhynchus_anatinus
ENSODEG00000019971-10076.389ENSOCUG00000026539-10076.389Oryctolagus_cuniculus
ENSODEG00000019971-8372.778ENSOCUG00000013664-10078.333Oryctolagus_cuniculus
ENSODEG00000019971-9973.272ENSORLG00000013088zcrb19873.272Oryzias_latipes
ENSODEG00000019971-9973.733ENSORLG00020019676zcrb19873.733Oryzias_latipes_hni
ENSODEG00000019971-9973.733ENSORLG00015017998zcrb18373.733Oryzias_latipes_hsok
ENSODEG00000019971-10072.727ENSOMEG00000011896zcrb110072.727Oryzias_melastigma
ENSODEG00000019971-10071.759ENSOGAG00000031462-10071.759Otolemur_garnettii
ENSODEG00000019971-10082.028ENSOGAG00000026881-10082.028Otolemur_garnettii
ENSODEG00000019971-10085.714ENSOGAG00000013178-10085.253Otolemur_garnettii
ENSODEG00000019971-10082.028ENSOARG00000000782-10085.253Ovis_aries
ENSODEG00000019971-10082.488ENSOARG00000019797-10085.714Ovis_aries
ENSODEG00000019971-10082.488ENSOARG00000004530-10085.714Ovis_aries
ENSODEG00000019971-10083.410ENSPPAG00000030593ZCRB110085.714Pan_paniscus
ENSODEG00000019971-10066.667ENSPPAG00000041848-10066.667Pan_paniscus
ENSODEG00000019971-10082.949ENSPPRG00000003066-10086.175Panthera_pardus
ENSODEG00000019971-10082.949ENSPTIG00000018037ZCRB110086.175Panthera_tigris_altaica
ENSODEG00000019971-10064.352ENSPTRG00000045111-10064.352Pan_troglodytes
ENSODEG00000019971-10083.410ENSPTRG00000004838ZCRB110085.714Pan_troglodytes
ENSODEG00000019971-9964.789ENSPANG00000031708-9964.789Papio_anubis
ENSODEG00000019971-10083.871ENSPANG00000010274ZCRB110086.175Papio_anubis
ENSODEG00000019971-10073.516ENSPKIG00000006587zcrb110076.256Paramormyrops_kingsleyae
ENSODEG00000019971-10082.028ENSPSIG00000014606ZCRB110082.488Pelodiscus_sinensis
ENSODEG00000019971-10072.973ENSPMGG00000007605zcrb110072.973Periophthalmus_magnuspinnatus
ENSODEG00000019971-10082.488ENSPEMG00000005293Zcrb110084.793Peromyscus_maniculatus_bairdii
ENSODEG00000019971-8861.538ENSPMAG00000001258zcrb110062.564Petromyzon_marinus
ENSODEG00000019971-10079.724ENSPCIG00000029300-10082.488Phascolarctos_cinereus
ENSODEG00000019971-10070.354ENSPFOG00000015564zcrb110072.727Poecilia_formosa
ENSODEG00000019971-10069.912ENSPLAG00000004685zcrb110072.273Poecilia_latipinna
ENSODEG00000019971-10070.354ENSPMEG00000005524zcrb110072.727Poecilia_mexicana
ENSODEG00000019971-10065.487ENSPREG00000011402zcrb110067.727Poecilia_reticulata
ENSODEG00000019971-10083.410ENSPPYG00000004422ZCRB110085.714Pongo_abelii
ENSODEG00000019971-10077.880ENSPCAG00000011749ZCRB110082.488Procavia_capensis
ENSODEG00000019971-10082.949ENSPCOG00000022958ZCRB110086.175Propithecus_coquereli
ENSODEG00000019971-8578.142ENSPVAG00000006651ZCRB19980.874Pteropus_vampyrus
ENSODEG00000019971-10073.059ENSPNYG00000008344zcrb110073.059Pundamilia_nyererei
ENSODEG00000019971-10070.776ENSPNAG00000023955zcrb110071.689Pygocentrus_nattereri
ENSODEG00000019971-10083.410ENSRNOG00000004996Zcrb110085.714Rattus_norvegicus
ENSODEG00000019971-10083.410ENSRBIG00000042559ZCRB110085.714Rhinopithecus_bieti
ENSODEG00000019971-10083.871ENSRROG00000033546ZCRB110086.175Rhinopithecus_roxellana
ENSODEG00000019971-6078.125ENSSBOG00000022234-8178.125Saimiri_boliviensis_boliviensis
ENSODEG00000019971-10083.410ENSSBOG00000019523ZCRB110085.714Saimiri_boliviensis_boliviensis
ENSODEG00000019971-10080.184ENSSHAG00000006273ZCRB110082.949Sarcophilus_harrisii
ENSODEG00000019971-10072.146ENSSFOG00015005150zcrb110072.146Scleropages_formosus
ENSODEG00000019971-10070.136ENSSMAG00000020477zcrb110069.643Scophthalmus_maximus
ENSODEG00000019971-10069.196ENSSDUG00000007140zcrb110070.089Seriola_dumerili
ENSODEG00000019971-10070.833ENSSLDG00000012143zcrb110071.296Seriola_lalandi_dorsalis
ENSODEG00000019971-8771.958ENSSARG00000000492ZCRB110075.661Sorex_araneus
ENSODEG00000019971-8178.409ENSSPUG00000009960ZCRB110078.409Sphenodon_punctatus
ENSODEG00000019971-10073.214ENSSPAG00000013412zcrb110073.661Stegastes_partitus
ENSODEG00000019971-10083.410ENSSSCG00000034066-10085.714Sus_scrofa
ENSODEG00000019971-10063.014ENSSSCG00000033618-10062.557Sus_scrofa
ENSODEG00000019971-10082.407ENSTGUG00000005829ZCRB110082.407Taeniopygia_guttata
ENSODEG00000019971-10074.537ENSTRUG00000016764zcrb110074.537Takifugu_rubripes
ENSODEG00000019971-10068.493ENSTNIG00000018504zcrb110068.349Tetraodon_nigroviridis
ENSODEG00000019971-10071.889ENSTBEG00000008097ZCRB110070.968Tupaia_belangeri
ENSODEG00000019971-10083.871ENSTTRG00000001378ZCRB110086.175Tursiops_truncatus
ENSODEG00000019971-10083.410ENSUMAG00000024199ZCRB110086.636Ursus_maritimus
ENSODEG00000019971-10083.410ENSVPAG00000012040ZCRB110085.714Vicugna_pacos
ENSODEG00000019971-10082.488ENSVVUG00000016801ZCRB110085.714Vulpes_vulpes
ENSODEG00000019971-10076.147ENSXETG00000006796zcrb110076.606Xenopus_tropicalis
ENSODEG00000019971-5976.190ENSXCOG00000014895zcrb18976.336Xiphophorus_couchianus
ENSODEG00000019971-10071.101ENSXMAG00000009359zcrb110072.018Xiphophorus_maculatus

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