EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000019996 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 375 bases
Position: chrJH651526.1:748777-749151
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026552	Trm112p	PF03966.16	3.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000027061	-	375	-	ENSODEP00000026552	124 (aa)	-	-

Gene Model

Click here to download ENSODEG00000019996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000019996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000019996	-	89	82.727	ENSODEG00000011737	-	83	82.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000019996	-	89	78.182	ENSG00000173113	TRMT112	88	78.182	Homo_sapiens
ENSODEG00000019996	-	88	75.229	ENSAMEG00000020192	-	88	75.229	Ailuropoda_melanoleuca
ENSODEG00000019996	-	98	80.800	ENSAMEG00000017965	-	100	80.800	Ailuropoda_melanoleuca
ENSODEG00000019996	-	97	75.610	ENSANAG00000021626	-	98	75.610	Aotus_nancymaae
ENSODEG00000019996	-	88	55.963	ENSANAG00000025496	-	85	55.963	Aotus_nancymaae
ENSODEG00000019996	-	98	76.800	ENSBTAG00000008646	TRMT112	100	76.800	Bos_taurus
ENSODEG00000019996	-	99	68.293	ENSBTAG00000047194	-	98	68.293	Bos_taurus
ENSODEG00000019996	-	97	73.171	ENSCJAG00000018026	-	98	73.171	Callithrix_jacchus
ENSODEG00000019996	-	98	80.800	ENSCAFG00000014445	TRMT112	100	80.800	Canis_familiaris
ENSODEG00000019996	-	98	80.800	ENSCAFG00020014158	TRMT112	100	80.800	Canis_lupus_dingo
ENSODEG00000019996	-	98	77.600	ENSCHIG00000023970	-	100	77.600	Capra_hircus
ENSODEG00000019996	-	98	77.600	ENSCHIG00000013770	-	100	77.600	Capra_hircus
ENSODEG00000019996	-	82	78.431	ENSTSYG00000025753	TRMT112	86	78.431	Carlito_syrichta
ENSODEG00000019996	-	99	84.127	ENSCPOG00000030092	TRMT112	95	84.127	Cavia_porcellus
ENSODEG00000019996	-	97	67.480	ENSCCAG00000028799	-	98	67.480	Cebus_capucinus
ENSODEG00000019996	-	97	75.610	ENSCCAG00000028185	-	98	75.610	Cebus_capucinus
ENSODEG00000019996	-	89	61.818	ENSCCAG00000035429	-	87	61.818	Cebus_capucinus
ENSODEG00000019996	-	89	79.091	ENSCATG00000037611	-	88	79.091	Cercocebus_atys
ENSODEG00000019996	-	53	60.606	ENSCATG00000039283	-	79	60.606	Cercocebus_atys
ENSODEG00000019996	-	89	89.091	ENSCLAG00000016885	TRMT112	88	89.091	Chinchilla_lanigera
ENSODEG00000019996	-	89	79.091	ENSCSAG00000007187	-	88	79.091	Chlorocebus_sabaeus
ENSODEG00000019996	-	89	78.182	ENSCSAG00000000388	-	88	78.182	Chlorocebus_sabaeus
ENSODEG00000019996	-	89	79.091	ENSCANG00000043448	-	88	79.091	Colobus_angolensis_palliatus
ENSODEG00000019996	-	89	79.091	ENSCANG00000007652	-	88	79.091	Colobus_angolensis_palliatus
ENSODEG00000019996	-	89	86.364	ENSCGRG00001018319	Trmt112	91	84.444	Cricetulus_griseus_chok1gshd
ENSODEG00000019996	-	89	86.364	ENSCGRG00000009853	Trmt112	91	84.444	Cricetulus_griseus_crigri
ENSODEG00000019996	-	98	81.600	ENSDNOG00000036525	-	100	81.600	Dasypus_novemcinctus
ENSODEG00000019996	-	98	79.200	ENSDNOG00000046974	-	100	79.200	Dasypus_novemcinctus
ENSODEG00000019996	-	89	86.364	ENSDORG00000012328	Trmt112	88	86.364	Dipodomys_ordii
ENSODEG00000019996	-	89	86.364	ENSETEG00000000263	TRMT112	88	86.364	Echinops_telfairi
ENSODEG00000019996	-	98	80.000	ENSEASG00005019934	TRMT112	100	80.000	Equus_asinus_asinus
ENSODEG00000019996	-	85	85.849	ENSECAG00000033970	-	61	85.849	Equus_caballus
ENSODEG00000019996	-	98	81.600	ENSFCAG00000023392	TRMT112	100	81.600	Felis_catus
ENSODEG00000019996	-	89	90.000	ENSFDAG00000007663	TRMT112	88	90.000	Fukomys_damarensis
ENSODEG00000019996	-	53	59.091	ENSGGOG00000038752	-	80	59.091	Gorilla_gorilla
ENSODEG00000019996	-	89	78.182	ENSGGOG00000001334	TRMT112	88	78.182	Gorilla_gorilla
ENSODEG00000019996	-	89	90.909	ENSHGLG00000011130	TRMT112	88	90.909	Heterocephalus_glaber_female
ENSODEG00000019996	-	89	90.909	ENSHGLG00100014193	TRMT112	88	90.909	Heterocephalus_glaber_male
ENSODEG00000019996	-	89	88.182	ENSSTOG00000019857	TRMT112	88	88.182	Ictidomys_tridecemlineatus
ENSODEG00000019996	-	89	83.636	ENSJJAG00000022077	Trmt112	90	82.418	Jaculus_jaculus
ENSODEG00000019996	-	89	90.000	ENSLAFG00000029149	TRMT112	88	90.000	Loxodonta_africana
ENSODEG00000019996	-	89	68.182	ENSMFAG00000033613	-	86	68.182	Macaca_fascicularis
ENSODEG00000019996	-	84	61.538	ENSMFAG00000029782	-	74	61.538	Macaca_fascicularis
ENSODEG00000019996	-	89	79.091	ENSMFAG00000044258	-	88	79.091	Macaca_fascicularis
ENSODEG00000019996	-	89	79.091	ENSMMUG00000019647	TRMT112	88	79.091	Macaca_mulatta
ENSODEG00000019996	-	89	68.182	ENSMMUG00000029341	-	86	68.182	Macaca_mulatta
ENSODEG00000019996	-	89	79.091	ENSMNEG00000013487	TRMT112	88	79.091	Macaca_nemestrina
ENSODEG00000019996	-	89	77.273	ENSMLEG00000017888	TRMT112	88	77.273	Mandrillus_leucophaeus
ENSODEG00000019996	-	84	62.500	ENSMAUG00000009833	-	88	62.500	Mesocricetus_auratus
ENSODEG00000019996	-	89	86.364	ENSMAUG00000013650	-	88	86.364	Mesocricetus_auratus
ENSODEG00000019996	-	89	69.369	ENSMICG00000031564	-	87	69.369	Microcebus_murinus
ENSODEG00000019996	-	89	87.273	ENSMICG00000016987	-	88	87.273	Microcebus_murinus
ENSODEG00000019996	-	89	85.455	ENSMOCG00000007447	-	88	85.455	Microtus_ochrogaster
ENSODEG00000019996	-	89	83.636	ENSMOCG00000001529	-	88	83.636	Microtus_ochrogaster
ENSODEG00000019996	-	89	85.455	MGP_CAROLIEiJ_G0022615	Trmt112	88	85.455	Mus_caroli
ENSODEG00000019996	-	89	85.455	ENSMUSG00000038812	Trmt112	88	85.455	Mus_musculus
ENSODEG00000019996	-	89	85.455	MGP_PahariEiJ_G0014109	Trmt112	88	85.455	Mus_pahari
ENSODEG00000019996	-	89	85.455	MGP_SPRETEiJ_G0023526	Trmt112	88	85.455	Mus_spretus
ENSODEG00000019996	-	98	81.600	ENSMPUG00000012911	TRMT112	100	81.600	Mustela_putorius_furo
ENSODEG00000019996	-	89	81.818	ENSMLUG00000008867	TRMT112	88	81.818	Myotis_lucifugus
ENSODEG00000019996	-	98	76.800	ENSNGAG00000019029	Trmt112	100	76.800	Nannospalax_galili
ENSODEG00000019996	-	89	76.364	ENSNLEG00000028260	TRMT112	88	76.364	Nomascus_leucogenys
ENSODEG00000019996	-	90	72.973	ENSOPRG00000004130	-	99	72.973	Ochotona_princeps
ENSODEG00000019996	-	68	80.952	ENSOCUG00000027361	-	68	80.952	Oryctolagus_cuniculus
ENSODEG00000019996	-	76	79.787	ENSOCUG00000004445	-	86	79.787	Oryctolagus_cuniculus
ENSODEG00000019996	-	89	86.364	ENSOGAG00000013535	TRMT112	88	86.364	Otolemur_garnettii
ENSODEG00000019996	-	98	77.600	ENSOARG00000006842	TRMT112	100	77.600	Ovis_aries
ENSODEG00000019996	-	89	78.182	ENSPPAG00000039858	TRMT112	88	78.182	Pan_paniscus
ENSODEG00000019996	-	98	82.400	ENSPPRG00000003855	-	100	82.400	Panthera_pardus
ENSODEG00000019996	-	98	81.600	ENSPTIG00000016927	TRMT112	100	81.600	Panthera_tigris_altaica
ENSODEG00000019996	-	89	78.182	ENSPTRG00000003834	TRMT112	88	78.182	Pan_troglodytes
ENSODEG00000019996	-	53	60.606	ENSPANG00000009935	-	79	60.606	Papio_anubis
ENSODEG00000019996	-	89	79.091	ENSPANG00000035234	-	88	79.091	Papio_anubis
ENSODEG00000019996	-	84	61.538	ENSPANG00000032340	-	74	61.538	Papio_anubis
ENSODEG00000019996	-	89	75.455	ENSPEMG00000021482	-	94	75.455	Peromyscus_maniculatus_bairdii
ENSODEG00000019996	-	89	86.364	ENSPEMG00000014684	-	88	86.364	Peromyscus_maniculatus_bairdii
ENSODEG00000019996	-	89	81.081	ENSPCIG00000008032	TRMT112	88	81.081	Phascolarctos_cinereus
ENSODEG00000019996	-	89	78.182	ENSPPYG00000025906	TRMT112	88	78.182	Pongo_abelii
ENSODEG00000019996	-	89	85.455	ENSPCAG00000010782	TRMT112	88	85.455	Procavia_capensis
ENSODEG00000019996	-	89	86.364	ENSPCOG00000027044	TRMT112	88	86.364	Propithecus_coquereli
ENSODEG00000019996	-	98	78.400	ENSPVAG00000017134	TRMT112	100	78.400	Pteropus_vampyrus
ENSODEG00000019996	-	89	86.364	ENSRNOG00000021132	Trmt112	88	86.364	Rattus_norvegicus
ENSODEG00000019996	-	86	64.486	ENSRBIG00000041110	-	84	64.486	Rhinopithecus_bieti
ENSODEG00000019996	-	89	78.182	ENSRBIG00000042875	-	88	78.182	Rhinopithecus_bieti
ENSODEG00000019996	-	89	79.091	ENSRBIG00000039623	-	88	79.091	Rhinopithecus_bieti
ENSODEG00000019996	-	89	79.091	ENSRROG00000044424	TRMT112	88	79.091	Rhinopithecus_roxellana
ENSODEG00000019996	-	97	75.610	ENSSBOG00000023130	-	98	75.610	Saimiri_boliviensis_boliviensis
ENSODEG00000019996	-	89	87.273	ENSSSCG00000013029	TRMT112	88	87.273	Sus_scrofa
ENSODEG00000019996	-	98	80.800	ENSTTRG00000010299	TRMT112	100	80.800	Tursiops_truncatus
ENSODEG00000019996	-	98	81.600	ENSUAMG00000015174	-	100	81.600	Ursus_americanus
ENSODEG00000019996	-	98	74.400	ENSUAMG00000018571	-	100	74.400	Ursus_americanus
ENSODEG00000019996	-	98	73.600	ENSUMAG00000001654	-	100	73.600	Ursus_maritimus
ENSODEG00000019996	-	98	79.200	ENSUMAG00000002772	-	100	79.200	Ursus_maritimus
ENSODEG00000019996	-	98	81.600	ENSVVUG00000029760	TRMT112	100	81.600	Vulpes_vulpes