EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000020016 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 789 bases
Position: chrJH651552.1:6050181-6050969
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026568	RRM_1	PF00076.22	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000027081	-	789	-	ENSODEP00000026568	262 (aa)	-	UPI0003336623

Gene Model

Click here to download ENSODEG00000020016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000020016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000020016	-	63	77.439	ENSODEG00000002658	-	78	66.667
ENSODEG00000020016	-	100	70.229	ENSODEG00000018292	-	100	66.288
ENSODEG00000020016	-	100	95.802	ENSODEG00000018739	-	100	95.802
ENSODEG00000020016	-	100	71.374	ENSODEG00000007110	-	100	68.321
ENSODEG00000020016	-	76	95.960	ENSODEG00000019549	-	91	95.960

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000020016	-	100	97.710	ENSG00000188529	SRSF10	100	97.710	Homo_sapiens
ENSODEG00000020016	-	100	95.076	ENSAMEG00000009869	SRSF10	100	95.076	Ailuropoda_melanoleuca
ENSODEG00000020016	-	92	94.628	ENSAPLG00000005446	SRSF10	100	94.628	Anas_platyrhynchos
ENSODEG00000020016	-	89	89.744	ENSACAG00000005327	SRSF10	92	89.744	Anolis_carolinensis
ENSODEG00000020016	-	100	83.969	ENSANAG00000033337	-	100	83.969	Aotus_nancymaae
ENSODEG00000020016	-	89	74.359	ENSANAG00000033569	-	84	93.878	Aotus_nancymaae
ENSODEG00000020016	-	100	89.695	ENSANAG00000029200	-	100	89.695	Aotus_nancymaae
ENSODEG00000020016	-	60	96.203	ENSBTAG00000054307	-	77	96.203	Bos_taurus
ENSODEG00000020016	-	63	97.561	ENSBTAG00000008072	SRSF10	90	97.561	Bos_taurus
ENSODEG00000020016	-	100	97.328	ENSCJAG00000044116	SRSF10	100	97.328	Callithrix_jacchus
ENSODEG00000020016	-	66	86.047	ENSCJAG00000002933	-	98	86.188	Callithrix_jacchus
ENSODEG00000020016	-	68	92.655	ENSCJAG00000010608	-	95	92.655	Callithrix_jacchus
ENSODEG00000020016	-	60	93.631	ENSCAFG00000003095	-	86	72.889	Canis_familiaris
ENSODEG00000020016	-	94	95.510	ENSCAFG00020020795	-	92	95.510	Canis_lupus_dingo
ENSODEG00000020016	-	63	89.024	ENSCHIG00000000308	-	88	95.105	Capra_hircus
ENSODEG00000020016	-	100	97.710	ENSTSYG00000009439	-	100	97.710	Carlito_syrichta
ENSODEG00000020016	-	96	92.430	ENSCAPG00000014746	SRSF10	98	92.430	Cavia_aperea
ENSODEG00000020016	-	100	97.710	ENSCPOG00000034102	SRSF10	100	97.710	Cavia_porcellus
ENSODEG00000020016	-	63	78.049	ENSCCAG00000024936	-	88	78.049	Cebus_capucinus
ENSODEG00000020016	-	54	85.106	ENSCCAG00000033919	-	71	85.106	Cebus_capucinus
ENSODEG00000020016	-	100	97.710	ENSCCAG00000022497	SRSF10	100	97.710	Cebus_capucinus
ENSODEG00000020016	-	100	97.710	ENSCATG00000031598	SRSF10	100	97.710	Cercocebus_atys
ENSODEG00000020016	-	100	97.710	ENSCLAG00000015555	SRSF10	100	97.710	Chinchilla_lanigera
ENSODEG00000020016	-	55	98.621	ENSCHOG00000004836	-	100	98.621	Choloepus_hoffmanni
ENSODEG00000020016	-	62	98.160	ENSCHOG00000007773	-	100	98.160	Choloepus_hoffmanni
ENSODEG00000020016	-	100	93.939	ENSCPBG00000000469	SRSF10	100	93.939	Chrysemys_picta_bellii
ENSODEG00000020016	-	54	98.592	ENSCANG00000037293	-	92	98.592	Colobus_angolensis_palliatus
ENSODEG00000020016	-	100	92.748	ENSCANG00000041113	-	100	92.748	Colobus_angolensis_palliatus
ENSODEG00000020016	-	94	71.951	ENSCANG00000010607	-	98	70.325	Colobus_angolensis_palliatus
ENSODEG00000020016	-	55	98.601	ENSCANG00000042227	-	93	98.582	Colobus_angolensis_palliatus
ENSODEG00000020016	-	55	97.931	ENSCANG00000037461	-	88	97.931	Colobus_angolensis_palliatus
ENSODEG00000020016	-	100	97.328	ENSCGRG00001017946	Srsf10	100	97.328	Cricetulus_griseus_chok1gshd
ENSODEG00000020016	-	98	91.016	ENSCGRG00000011531	Srsf10	97	91.016	Cricetulus_griseus_crigri
ENSODEG00000020016	-	98	68.605	ENSDNOG00000048916	-	98	68.605	Dasypus_novemcinctus
ENSODEG00000020016	-	51	64.925	ENSDNOG00000048051	-	71	75.789	Dasypus_novemcinctus
ENSODEG00000020016	-	100	97.328	ENSDORG00000024574	Srsf10	100	97.328	Dipodomys_ordii
ENSODEG00000020016	-	100	96.565	ENSEASG00005004349	SRSF10	100	96.565	Equus_asinus_asinus
ENSODEG00000020016	-	100	97.328	ENSECAG00000023709	SRSF10	100	97.328	Equus_caballus
ENSODEG00000020016	-	100	96.198	ENSEEUG00000014286	SRSF10	100	96.198	Erinaceus_europaeus
ENSODEG00000020016	-	100	97.328	ENSFCAG00000045556	SRSF10	100	97.328	Felis_catus
ENSODEG00000020016	-	100	94.656	ENSFALG00000000505	SRSF10	100	94.656	Ficedula_albicollis
ENSODEG00000020016	-	86	70.667	ENSFDAG00000021316	-	91	70.667	Fukomys_damarensis
ENSODEG00000020016	-	54	86.525	ENSFDAG00000005977	-	92	86.525	Fukomys_damarensis
ENSODEG00000020016	-	100	95.802	ENSFDAG00000019418	SRSF10	100	95.802	Fukomys_damarensis
ENSODEG00000020016	-	100	95.420	ENSGALG00000004133	SRSF10	100	95.420	Gallus_gallus
ENSODEG00000020016	-	72	57.979	ENSGAFG00000014771	srsf10b	98	62.371	Gambusia_affinis
ENSODEG00000020016	-	100	93.939	ENSGAGG00000005357	SRSF10	100	93.939	Gopherus_agassizii
ENSODEG00000020016	-	100	97.710	ENSGGOG00000000392	SRSF10	100	97.710	Gorilla_gorilla
ENSODEG00000020016	-	61	72.956	ENSGGOG00000042323	-	92	72.327	Gorilla_gorilla
ENSODEG00000020016	-	96	75.794	ENSGGOG00000036220	-	99	72.222	Gorilla_gorilla
ENSODEG00000020016	-	79	83.010	ENSHGLG00000018327	-	96	74.797	Heterocephalus_glaber_female
ENSODEG00000020016	-	100	97.338	ENSHGLG00000010879	-	100	97.338	Heterocephalus_glaber_female
ENSODEG00000020016	-	99	63.118	ENSHGLG00100014822	-	100	57.414	Heterocephalus_glaber_male
ENSODEG00000020016	-	84	79.730	ENSHGLG00100011571	-	100	72.519	Heterocephalus_glaber_male
ENSODEG00000020016	-	100	95.817	ENSHGLG00100008152	-	100	95.817	Heterocephalus_glaber_male
ENSODEG00000020016	-	100	97.710	ENSSTOG00000000956	SRSF10	100	97.710	Ictidomys_tridecemlineatus
ENSODEG00000020016	-	100	81.679	ENSJJAG00000012744	-	100	77.863	Jaculus_jaculus
ENSODEG00000020016	-	65	88.166	ENSJJAG00000021270	-	100	67.939	Jaculus_jaculus
ENSODEG00000020016	-	63	96.951	ENSJJAG00000014552	-	90	96.951	Jaculus_jaculus
ENSODEG00000020016	-	100	97.328	ENSJJAG00000009074	Srsf10	100	97.328	Jaculus_jaculus
ENSODEG00000020016	-	63	71.951	ENSJJAG00000023686	-	87	65.854	Jaculus_jaculus
ENSODEG00000020016	-	100	57.736	ENSLOCG00000005685	srsf10b	96	60.593	Lepisosteus_oculatus
ENSODEG00000020016	-	100	96.970	ENSLAFG00000026905	SRSF10	100	96.970	Loxodonta_africana
ENSODEG00000020016	-	100	97.710	ENSMFAG00000046011	SRSF10	100	97.710	Macaca_fascicularis
ENSODEG00000020016	-	100	96.183	ENSMMUG00000038562	-	100	96.183	Macaca_mulatta
ENSODEG00000020016	-	100	97.328	ENSMMUG00000013784	SRSF10	100	97.328	Macaca_mulatta
ENSODEG00000020016	-	100	97.710	ENSMNEG00000041500	SRSF10	100	97.710	Macaca_nemestrina
ENSODEG00000020016	-	98	82.946	ENSMLEG00000033834	-	97	82.946	Mandrillus_leucophaeus
ENSODEG00000020016	-	100	97.710	ENSMLEG00000016013	SRSF10	100	97.710	Mandrillus_leucophaeus
ENSODEG00000020016	-	92	94.628	ENSMGAG00000005772	SRSF10	100	94.628	Meleagris_gallopavo
ENSODEG00000020016	-	100	97.710	ENSMAUG00000019452	Srsf10	100	97.710	Mesocricetus_auratus
ENSODEG00000020016	-	100	97.710	ENSMICG00000047638	SRSF10	100	97.710	Microcebus_murinus
ENSODEG00000020016	-	63	98.780	ENSMICG00000017029	-	93	98.780	Microcebus_murinus
ENSODEG00000020016	-	85	91.441	ENSMICG00000037744	-	90	86.036	Microcebus_murinus
ENSODEG00000020016	-	100	96.183	ENSMOCG00000013656	Srsf10	100	96.183	Microtus_ochrogaster
ENSODEG00000020016	-	77	94.118	ENSMODG00000013020	-	99	94.118	Monodelphis_domestica
ENSODEG00000020016	-	100	97.710	MGP_CAROLIEiJ_G0026645	Srsf10	100	97.710	Mus_caroli
ENSODEG00000020016	-	100	97.710	ENSMUSG00000028676	Srsf10	100	97.710	Mus_musculus
ENSODEG00000020016	-	63	98.780	MGP_SPRETEiJ_G0027625	-	90	98.780	Mus_spretus
ENSODEG00000020016	-	100	97.328	ENSMPUG00000015845	SRSF10	100	97.328	Mustela_putorius_furo
ENSODEG00000020016	-	89	96.137	ENSMLUG00000005293	-	92	96.137	Myotis_lucifugus
ENSODEG00000020016	-	100	96.591	ENSMLUG00000028520	SRSF10	100	96.591	Myotis_lucifugus
ENSODEG00000020016	-	100	97.328	ENSNGAG00000000067	Srsf10	100	97.328	Nannospalax_galili
ENSODEG00000020016	-	100	97.710	ENSNLEG00000027520	SRSF10	100	97.710	Nomascus_leucogenys
ENSODEG00000020016	-	100	96.947	ENSOPRG00000018613	SRSF10	100	96.947	Ochotona_princeps
ENSODEG00000020016	-	65	77.778	ENSOCUG00000028110	-	93	77.778	Oryctolagus_cuniculus
ENSODEG00000020016	-	55	98.621	ENSOCUG00000024013	-	88	98.621	Oryctolagus_cuniculus
ENSODEG00000020016	-	55	97.241	ENSOCUG00000021782	-	88	97.241	Oryctolagus_cuniculus
ENSODEG00000020016	-	100	70.833	ENSOGAG00000015374	SRSF10	100	80.303	Otolemur_garnettii
ENSODEG00000020016	-	90	96.218	ENSOARG00000006984	-	92	96.218	Ovis_aries
ENSODEG00000020016	-	100	95.420	ENSOARG00000002384	-	94	95.420	Ovis_aries
ENSODEG00000020016	-	55	94.483	ENSOARG00000015607	-	78	94.483	Ovis_aries
ENSODEG00000020016	-	100	95.038	ENSOARG00000000073	-	100	95.038	Ovis_aries
ENSODEG00000020016	-	61	79.874	ENSPPAG00000007053	-	92	79.874	Pan_paniscus
ENSODEG00000020016	-	100	97.710	ENSPPAG00000032557	SRSF10	100	97.710	Pan_paniscus
ENSODEG00000020016	-	100	92.135	ENSPPRG00000001945	-	100	92.135	Panthera_pardus
ENSODEG00000020016	-	100	97.328	ENSPPRG00000005806	SRSF10	100	97.328	Panthera_pardus
ENSODEG00000020016	-	61	80.247	ENSPTIG00000012013	-	88	80.556	Panthera_tigris_altaica
ENSODEG00000020016	-	100	96.565	ENSPTIG00000014137	SRSF10	100	96.565	Panthera_tigris_altaica
ENSODEG00000020016	-	100	97.710	ENSPTRG00000044753	SRSF10	100	97.710	Pan_troglodytes
ENSODEG00000020016	-	61	82.390	ENSPTRG00000051779	-	93	82.390	Pan_troglodytes
ENSODEG00000020016	-	100	97.710	ENSPANG00000021680	SRSF10	100	97.710	Papio_anubis
ENSODEG00000020016	-	92	94.191	ENSPSIG00000017849	SRSF10	99	94.191	Pelodiscus_sinensis
ENSODEG00000020016	-	100	97.328	ENSPCIG00000014270	SRSF10	64	97.328	Phascolarctos_cinereus
ENSODEG00000020016	-	73	56.923	ENSPLAG00000004239	srsf10b	97	61.842	Poecilia_latipinna
ENSODEG00000020016	-	73	56.923	ENSPMEG00000000999	srsf10b	97	61.842	Poecilia_mexicana
ENSODEG00000020016	-	100	97.710	ENSPPYG00000001726	SRSF10	100	97.710	Pongo_abelii
ENSODEG00000020016	-	100	84.351	ENSPCAG00000004059	SRSF10	100	84.351	Procavia_capensis
ENSODEG00000020016	-	100	97.710	ENSPCOG00000022379	SRSF10	100	97.710	Propithecus_coquereli
ENSODEG00000020016	-	100	97.710	ENSPVAG00000013611	SRSF10	100	97.710	Pteropus_vampyrus
ENSODEG00000020016	-	63	98.780	ENSRNOG00000007992	Srsf10	100	98.780	Rattus_norvegicus
ENSODEG00000020016	-	100	97.710	ENSRBIG00000028456	SRSF10	100	97.710	Rhinopithecus_bieti
ENSODEG00000020016	-	98	86.822	ENSRBIG00000044085	-	97	86.822	Rhinopithecus_bieti
ENSODEG00000020016	-	100	97.710	ENSRROG00000043248	SRSF10	100	97.710	Rhinopithecus_roxellana
ENSODEG00000020016	-	98	86.822	ENSRROG00000036002	-	97	86.822	Rhinopithecus_roxellana
ENSODEG00000020016	-	77	81.773	ENSSBOG00000033963	-	69	91.503	Saimiri_boliviensis_boliviensis
ENSODEG00000020016	-	100	97.710	ENSSBOG00000019550	SRSF10	100	97.710	Saimiri_boliviensis_boliviensis
ENSODEG00000020016	-	100	97.710	ENSSSCG00000036293	SRSF10	100	97.710	Sus_scrofa
ENSODEG00000020016	-	62	92.683	ENSTGUG00000001178	-	100	92.683	Taeniopygia_guttata
ENSODEG00000020016	-	100	97.328	ENSTTRG00000016150	SRSF10	100	97.328	Tursiops_truncatus
ENSODEG00000020016	-	94	94.444	ENSUAMG00000011291	-	92	94.444	Ursus_americanus
ENSODEG00000020016	-	69	90.659	ENSUAMG00000026596	-	99	90.659	Ursus_americanus
ENSODEG00000020016	-	87	89.912	ENSVVUG00000026904	-	85	89.912	Vulpes_vulpes
ENSODEG00000020016	-	73	57.895	ENSXMAG00000029337	srsf10b	97	60.870	Xiphophorus_maculatus