EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000020033 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 447 bases
Position: chrJH651556.1:4501858-4502304
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026583	RNA_pol_Rpb4	PF03874.16	2.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000027098	-	447	-	ENSODEP00000026583	148 (aa)	-	-

Gene Model

Click here to download ENSODEG00000020033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000020033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000020033	-	98	99.310	ENSODEG00000014255	-	100	99.310
ENSODEG00000020033	-	100	73.649	ENSODEG00000003432	-	100	73.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000020033	-	100	86.667	ENSG00000241258	CRCP	100	84.667	Homo_sapiens
ENSODEG00000020033	-	97	73.611	ENSAPOG00000016572	crcp	97	71.528	Acanthochromis_polyacanthus
ENSODEG00000020033	-	98	86.207	ENSAMEG00000015954	CRCP	99	84.138	Ailuropoda_melanoleuca
ENSODEG00000020033	-	95	72.143	ENSACIG00000020248	crcp	92	70.000	Amphilophus_citrinellus
ENSODEG00000020033	-	97	74.306	ENSAOCG00000021389	crcp	97	72.222	Amphiprion_ocellaris
ENSODEG00000020033	-	97	61.111	ENSAPEG00000016688	crcp	96	61.111	Amphiprion_percula
ENSODEG00000020033	-	97	72.222	ENSATEG00000008670	crcp	97	70.139	Anabas_testudineus
ENSODEG00000020033	-	100	85.906	ENSANAG00000032466	CRCP	100	83.893	Aotus_nancymaae
ENSODEG00000020033	-	99	74.658	ENSACLG00000007588	crcp	98	72.603	Astatotilapia_calliptera
ENSODEG00000020033	-	95	70.000	ENSAMXG00000043940	crcp	95	67.857	Astyanax_mexicanus
ENSODEG00000020033	-	100	83.893	ENSBTAG00000037489	CRCP	100	81.879	Bos_taurus
ENSODEG00000020033	-	100	82.550	ENSBTAG00000049986	-	100	81.208	Bos_taurus
ENSODEG00000020033	-	87	41.860	WBGene00044924	M106.7	98	41.860	Caenorhabditis_elegans
ENSODEG00000020033	-	100	84.564	ENSCJAG00000004225	CRCP	100	82.550	Callithrix_jacchus
ENSODEG00000020033	-	100	85.135	ENSCAFG00000010756	CRCP	100	83.108	Canis_familiaris
ENSODEG00000020033	-	100	85.135	ENSCAFG00020005322	CRCP	100	83.108	Canis_lupus_dingo
ENSODEG00000020033	-	95	78.873	ENSCHIG00000015299	CRCP	90	76.761	Capra_hircus
ENSODEG00000020033	-	100	86.000	ENSTSYG00000005933	CRCP	100	84.000	Carlito_syrichta
ENSODEG00000020033	-	100	64.430	ENSCATG00000036957	CRCP	96	71.014	Cercocebus_atys
ENSODEG00000020033	-	100	92.617	ENSCLAG00000007249	CRCP	100	92.617	Chinchilla_lanigera
ENSODEG00000020033	-	90	85.075	ENSCSAG00000018288	CRCP	75	82.836	Chlorocebus_sabaeus
ENSODEG00000020033	-	89	80.303	ENSCPBG00000014854	CRCP	89	78.030	Chrysemys_picta_bellii
ENSODEG00000020033	-	59	51.724	ENSCING00000003588	cgrp-rcp	96	49.593	Ciona_intestinalis
ENSODEG00000020033	-	100	85.906	ENSCANG00000038796	CRCP	100	83.893	Colobus_angolensis_palliatus
ENSODEG00000020033	-	100	82.667	ENSCGRG00001009376	Crcp	100	80.667	Cricetulus_griseus_chok1gshd
ENSODEG00000020033	-	100	82.000	ENSCGRG00000003194	Crcp	100	80.000	Cricetulus_griseus_crigri
ENSODEG00000020033	-	97	69.930	ENSCSEG00000018814	crcp	95	67.832	Cynoglossus_semilaevis
ENSODEG00000020033	-	99	69.863	ENSCVAG00000013625	crcp	98	67.808	Cyprinodon_variegatus
ENSODEG00000020033	-	91	75.373	ENSDARG00000069373	crcp	92	73.134	Danio_rerio
ENSODEG00000020033	-	98	85.517	ENSDNOG00000002751	CRCP	98	83.448	Dasypus_novemcinctus
ENSODEG00000020033	-	98	81.507	ENSDORG00000013712	Crcp	100	79.452	Dipodomys_ordii
ENSODEG00000020033	-	100	86.000	ENSEASG00005008835	CRCP	100	83.221	Equus_asinus_asinus
ENSODEG00000020033	-	98	86.301	ENSECAG00000011060	CRCP	98	84.247	Equus_caballus
ENSODEG00000020033	-	89	78.788	ENSEEUG00000005796	-	100	76.515	Erinaceus_europaeus
ENSODEG00000020033	-	99	71.429	ENSELUG00000019916	crcp	99	68.919	Esox_lucius
ENSODEG00000020033	-	100	84.459	ENSFCAG00000022099	CRCP	100	82.432	Felis_catus
ENSODEG00000020033	-	88	81.538	ENSFALG00000006720	CRCP	91	79.231	Ficedula_albicollis
ENSODEG00000020033	-	100	88.591	ENSFDAG00000014337	CRCP	100	88.591	Fukomys_damarensis
ENSODEG00000020033	-	99	71.918	ENSFHEG00000021283	crcp	98	69.863	Fundulus_heteroclitus
ENSODEG00000020033	-	87	79.845	ENSGMOG00000011351	crcp	91	77.519	Gadus_morhua
ENSODEG00000020033	-	99	76.712	ENSGALG00000002587	CRCP	97	74.658	Gallus_gallus
ENSODEG00000020033	-	99	71.233	ENSGAFG00000002307	crcp	98	69.178	Gambusia_affinis
ENSODEG00000020033	-	89	78.030	ENSGACG00000020468	crcp	92	75.758	Gasterosteus_aculeatus
ENSODEG00000020033	-	89	81.818	ENSGAGG00000011445	CRCP	86	78.788	Gopherus_agassizii
ENSODEG00000020033	-	100	86.667	ENSGGOG00000039733	CRCP	100	84.667	Gorilla_gorilla
ENSODEG00000020033	-	99	73.973	ENSHBUG00000004779	crcp	98	71.918	Haplochromis_burtoni
ENSODEG00000020033	-	100	88.591	ENSHGLG00000011719	CRCP	100	88.591	Heterocephalus_glaber_female
ENSODEG00000020033	-	98	82.993	ENSHGLG00100005071	CRCP	100	82.993	Heterocephalus_glaber_male
ENSODEG00000020033	-	93	71.739	ENSHCOG00000009105	crcp	97	69.565	Hippocampus_comes
ENSODEG00000020033	-	97	71.329	ENSIPUG00000024520	CRCP	97	69.231	Ictalurus_punctatus
ENSODEG00000020033	-	90	85.926	ENSSTOG00000008885	CRCP	100	83.704	Ictidomys_tridecemlineatus
ENSODEG00000020033	-	100	83.893	ENSJJAG00000016893	Crcp	100	81.879	Jaculus_jaculus
ENSODEG00000020033	-	87	77.519	ENSKMAG00000007300	crcp	99	69.863	Kryptolebias_marmoratus
ENSODEG00000020033	-	99	69.388	ENSLBEG00000000804	crcp	98	67.347	Labrus_bergylta
ENSODEG00000020033	-	95	73.050	ENSLOCG00000005302	crcp	96	70.922	Lepisosteus_oculatus
ENSODEG00000020033	-	98	84.828	ENSLAFG00000027377	CRCP	100	82.759	Loxodonta_africana
ENSODEG00000020033	-	100	85.235	ENSMFAG00000037828	CRCP	100	83.221	Macaca_fascicularis
ENSODEG00000020033	-	100	85.235	ENSMMUG00000014524	CRCP	100	83.221	Macaca_mulatta
ENSODEG00000020033	-	67	81.818	ENSMNEG00000030945	CRCP	97	81.818	Macaca_nemestrina
ENSODEG00000020033	-	100	85.235	ENSMLEG00000043904	CRCP	100	83.221	Mandrillus_leucophaeus
ENSODEG00000020033	-	99	74.150	ENSMAMG00000021168	crcp	90	75.758	Mastacembelus_armatus
ENSODEG00000020033	-	99	74.658	ENSMZEG00005025255	crcp	98	72.603	Maylandia_zebra
ENSODEG00000020033	-	89	81.061	ENSMGAG00000004593	CRCP	90	78.788	Meleagris_gallopavo
ENSODEG00000020033	-	57	90.476	ENSMAUG00000018383	Crcp	100	90.476	Mesocricetus_auratus
ENSODEG00000020033	-	100	87.248	ENSMICG00000004191	CRCP	100	85.235	Microcebus_murinus
ENSODEG00000020033	-	98	82.192	ENSMOCG00000002717	Crcp	98	80.137	Microtus_ochrogaster
ENSODEG00000020033	-	97	74.306	ENSMMOG00000011491	crcp	87	72.222	Mola_mola
ENSODEG00000020033	-	97	72.028	ENSMALG00000020309	crcp	97	69.930	Monopterus_albus
ENSODEG00000020033	-	100	82.550	MGP_CAROLIEiJ_G0027795	Crcp	100	80.537	Mus_caroli
ENSODEG00000020033	-	100	82.550	ENSMUSG00000025532	Crcp	100	80.537	Mus_musculus
ENSODEG00000020033	-	100	82.550	MGP_PahariEiJ_G0024389	Crcp	100	80.537	Mus_pahari
ENSODEG00000020033	-	100	81.208	MGP_SPRETEiJ_G0028793	Crcp	100	79.195	Mus_spretus
ENSODEG00000020033	-	99	84.932	ENSMPUG00000016198	CRCP	100	82.877	Mustela_putorius_furo
ENSODEG00000020033	-	98	85.714	ENSMLUG00000012217	CRCP	100	83.673	Myotis_lucifugus
ENSODEG00000020033	-	100	83.221	ENSNGAG00000021687	Crcp	100	81.208	Nannospalax_galili
ENSODEG00000020033	-	89	74.242	ENSNBRG00000003094	crcp	64	71.970	Neolamprologus_brichardi
ENSODEG00000020033	-	98	85.616	ENSNLEG00000001437	CRCP	98	83.562	Nomascus_leucogenys
ENSODEG00000020033	-	99	64.000	ENSONIG00000008677	crcp	98	62.000	Oreochromis_niloticus
ENSODEG00000020033	-	68	88.119	ENSOANG00000009026	-	74	88.119	Ornithorhynchus_anatinus
ENSODEG00000020033	-	100	83.784	ENSOCUG00000014827	CRCP	100	81.757	Oryctolagus_cuniculus
ENSODEG00000020033	-	98	72.414	ENSORLG00000028784	crcp	95	70.345	Oryzias_latipes
ENSODEG00000020033	-	98	71.724	ENSORLG00020017373	crcp	95	69.655	Oryzias_latipes_hni
ENSODEG00000020033	-	98	71.724	ENSORLG00015001859	crcp	95	69.655	Oryzias_latipes_hsok
ENSODEG00000020033	-	98	72.414	ENSOMEG00000008006	crcp	95	70.345	Oryzias_melastigma
ENSODEG00000020033	-	98	72.109	ENSOGAG00000001914	CRCP	100	70.068	Otolemur_garnettii
ENSODEG00000020033	-	86	88.281	ENSOARG00000010380	-	51	86.719	Ovis_aries
ENSODEG00000020033	-	100	86.667	ENSPPAG00000030427	CRCP	100	84.667	Pan_paniscus
ENSODEG00000020033	-	100	84.459	ENSPPRG00000012841	CRCP	100	82.432	Panthera_pardus
ENSODEG00000020033	-	98	80.272	ENSPTIG00000009335	CRCP	100	78.231	Panthera_tigris_altaica
ENSODEG00000020033	-	100	86.667	ENSPTRG00000046581	CRCP	100	84.667	Pan_troglodytes
ENSODEG00000020033	-	98	87.075	ENSPTRG00000019246	-	98	84.247	Pan_troglodytes
ENSODEG00000020033	-	100	85.235	ENSPANG00000023118	CRCP	100	83.221	Papio_anubis
ENSODEG00000020033	-	92	76.471	ENSPKIG00000011467	crcp	90	74.265	Paramormyrops_kingsleyae
ENSODEG00000020033	-	96	74.648	ENSPSIG00000008385	CRCP	94	72.535	Pelodiscus_sinensis
ENSODEG00000020033	-	94	72.662	ENSPMGG00000005986	crcp	94	70.504	Periophthalmus_magnuspinnatus
ENSODEG00000020033	-	100	81.879	ENSPEMG00000010829	Crcp	100	79.866	Peromyscus_maniculatus_bairdii
ENSODEG00000020033	-	99	71.233	ENSPFOG00000008626	crcp	98	69.178	Poecilia_formosa
ENSODEG00000020033	-	99	71.233	ENSPLAG00000005996	crcp	98	69.178	Poecilia_latipinna
ENSODEG00000020033	-	99	71.233	ENSPMEG00000020035	crcp	98	69.178	Poecilia_mexicana
ENSODEG00000020033	-	67	80.808	ENSPREG00000008487	crcp	73	80.808	Poecilia_reticulata
ENSODEG00000020033	-	100	85.906	ENSPPYG00000017525	CRCP	100	83.893	Pongo_abelii
ENSODEG00000020033	-	99	73.973	ENSPNYG00000016988	crcp	98	71.918	Pundamilia_nyererei
ENSODEG00000020033	-	93	73.723	ENSPNAG00000004712	crcp	94	71.533	Pygocentrus_nattereri
ENSODEG00000020033	-	99	82.550	ENSRNOG00000000901	Crcp	100	80.537	Rattus_norvegicus
ENSODEG00000020033	-	98	86.301	ENSRBIG00000039256	CRCP	98	84.247	Rhinopithecus_bieti
ENSODEG00000020033	-	98	86.301	ENSRROG00000037982	CRCP	98	84.247	Rhinopithecus_roxellana
ENSODEG00000020033	-	98	84.932	ENSSBOG00000025998	-	100	82.877	Saimiri_boliviensis_boliviensis
ENSODEG00000020033	-	100	84.000	ENSSBOG00000011617	-	100	82.000	Saimiri_boliviensis_boliviensis
ENSODEG00000020033	-	86	87.500	ENSSHAG00000007315	CRCP	88	85.156	Sarcophilus_harrisii
ENSODEG00000020033	-	99	72.109	ENSSFOG00015013799	crcp	98	69.388	Scleropages_formosus
ENSODEG00000020033	-	87	76.744	ENSSMAG00000019004	crcp	98	70.068	Scophthalmus_maximus
ENSODEG00000020033	-	99	75.342	ENSSDUG00000019628	crcp	95	72.727	Seriola_dumerili
ENSODEG00000020033	-	99	74.658	ENSSLDG00000016367	crcp	98	72.603	Seriola_lalandi_dorsalis
ENSODEG00000020033	-	99	72.789	ENSSPUG00000002367	CRCP	98	70.068	Sphenodon_punctatus
ENSODEG00000020033	-	99	73.973	ENSSPAG00000010443	crcp	98	72.263	Stegastes_partitus
ENSODEG00000020033	-	100	84.564	ENSSSCG00000032119	-	100	82.550	Sus_scrofa
ENSODEG00000020033	-	89	63.359	ENSSSCG00000034001	-	73	72.277	Sus_scrofa
ENSODEG00000020033	-	77	67.544	ENSSSCG00000039653	-	86	74.257	Sus_scrofa
ENSODEG00000020033	-	89	65.649	ENSSSCG00000031397	-	74	75.248	Sus_scrofa
ENSODEG00000020033	-	65	85.417	ENSTGUG00000005354	CRCP	100	85.417	Taeniopygia_guttata
ENSODEG00000020033	-	99	72.603	ENSTRUG00000025161	crcp	98	70.548	Takifugu_rubripes
ENSODEG00000020033	-	99	70.946	ENSTNIG00000016137	crcp	98	68.919	Tetraodon_nigroviridis
ENSODEG00000020033	-	100	82.550	ENSTTRG00000002888	CRCP	100	80.537	Tursiops_truncatus
ENSODEG00000020033	-	100	85.135	ENSUMAG00000015406	CRCP	100	83.108	Ursus_maritimus
ENSODEG00000020033	-	98	85.616	ENSVPAG00000006107	CRCP	100	83.562	Vicugna_pacos
ENSODEG00000020033	-	100	85.135	ENSVVUG00000016521	CRCP	100	83.108	Vulpes_vulpes
ENSODEG00000020033	-	87	75.969	ENSXETG00000025028	crcp	89	73.643	Xenopus_tropicalis
ENSODEG00000020033	-	92	69.343	ENSXCOG00000007013	crcp	86	67.153	Xiphophorus_couchianus
ENSODEG00000020033	-	99	69.863	ENSXMAG00000022222	crcp	98	70.068	Xiphophorus_maculatus