EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000020110 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 723 bases
Position: chrJH651634.1:931236-931958
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026652	LSM	PF01423.22	6.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000027175	-	723	-	ENSODEP00000026652	240 (aa)	-	UPI00033404E0

Gene Model

Click here to download ENSODEG00000020110's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000020110's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000020110	-	92	92.308	ENSODEG00000004305	-	96	92.308
ENSODEG00000020110	-	98	81.624	ENSODEG00000016065	-	87	86.957
ENSODEG00000020110	-	82	88.776	ENSODEG00000016060	-	90	88.732
ENSODEG00000020110	-	100	95.833	ENSODEG00000019708	-	89	99.061
ENSODEG00000020110	-	100	99.583	ENSODEG00000013478	-	100	99.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000020110	-	100	99.167	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSODEG00000020110	-	99	98.745	ENSAMEG00000007034	SNRPN	98	98.745	Ailuropoda_melanoleuca
ENSODEG00000020110	-	100	99.167	ENSANAG00000034241	SNRPN	100	99.167	Aotus_nancymaae
ENSODEG00000020110	-	100	98.750	ENSBTAG00000008251	SNRPN	100	98.750	Bos_taurus
ENSODEG00000020110	-	95	98.684	ENSCJAG00000042622	-	95	98.684	Callithrix_jacchus
ENSODEG00000020110	-	100	99.167	ENSCJAG00000003759	-	100	99.167	Callithrix_jacchus
ENSODEG00000020110	-	100	98.750	ENSCAFG00000010127	SNRPN	100	98.750	Canis_familiaris
ENSODEG00000020110	-	100	98.750	ENSCAFG00020024075	SNRPN	100	98.750	Canis_lupus_dingo
ENSODEG00000020110	-	100	98.750	ENSCHIG00000017477	SNRPN	100	98.750	Capra_hircus
ENSODEG00000020110	-	100	99.167	ENSTSYG00000005248	SNRPN	100	99.167	Carlito_syrichta
ENSODEG00000020110	-	100	99.167	ENSCAPG00000003047	SNRPN	100	99.167	Cavia_aperea
ENSODEG00000020110	-	100	99.167	ENSCPOG00000020270	SNRPN	100	99.167	Cavia_porcellus
ENSODEG00000020110	-	100	99.167	ENSCCAG00000024231	SNRPN	100	99.167	Cebus_capucinus
ENSODEG00000020110	-	100	99.167	ENSCATG00000032518	SNRPN	100	99.167	Cercocebus_atys
ENSODEG00000020110	-	100	99.167	ENSCLAG00000011376	SNRPN	100	99.167	Chinchilla_lanigera
ENSODEG00000020110	-	100	99.167	ENSCSAG00000006406	SNRPN	100	99.167	Chlorocebus_sabaeus
ENSODEG00000020110	-	98	98.718	ENSCHOG00000001846	SNRPN	88	98.718	Choloepus_hoffmanni
ENSODEG00000020110	-	100	99.167	ENSCANG00000041156	SNRPN	100	99.167	Colobus_angolensis_palliatus
ENSODEG00000020110	-	100	98.750	ENSCGRG00001004136	Snrpn	100	98.750	Cricetulus_griseus_chok1gshd
ENSODEG00000020110	-	100	98.750	ENSCGRG00000001621	Snrpn	100	98.750	Cricetulus_griseus_crigri
ENSODEG00000020110	-	72	91.908	ENSCVAG00000014193	SNRPN	69	92.262	Cyprinodon_variegatus
ENSODEG00000020110	-	99	98.326	ENSDNOG00000037060	SNRPN	98	98.326	Dasypus_novemcinctus
ENSODEG00000020110	-	100	99.583	ENSDORG00000004527	Snrpn	100	99.583	Dipodomys_ordii
ENSODEG00000020110	-	100	98.750	ENSEASG00005017871	SNRPN	100	98.750	Equus_asinus_asinus
ENSODEG00000020110	-	100	98.750	ENSECAG00000018148	SNRPN	100	98.750	Equus_caballus
ENSODEG00000020110	-	99	98.326	ENSEEUG00000007440	-	100	98.326	Erinaceus_europaeus
ENSODEG00000020110	-	100	98.750	ENSFCAG00000022298	-	100	98.750	Felis_catus
ENSODEG00000020110	-	100	99.583	ENSFDAG00000016578	-	100	99.583	Fukomys_damarensis
ENSODEG00000020110	-	76	86.339	ENSFDAG00000010528	-	86	86.339	Fukomys_damarensis
ENSODEG00000020110	-	74	76.271	ENSGMOG00000018161	SNRPN	74	75.595	Gadus_morhua
ENSODEG00000020110	-	100	99.167	ENSGGOG00000003988	SNRPN	100	99.167	Gorilla_gorilla
ENSODEG00000020110	-	90	72.558	ENSGGOG00000024469	-	70	82.014	Gorilla_gorilla
ENSODEG00000020110	-	89	90.610	ENSHGLG00000019812	-	89	90.141	Heterocephalus_glaber_female
ENSODEG00000020110	-	100	85.000	ENSHGLG00000002327	-	88	84.507	Heterocephalus_glaber_female
ENSODEG00000020110	-	100	99.167	ENSHGLG00000011924	SNRPN	100	99.167	Heterocephalus_glaber_female
ENSODEG00000020110	-	90	80.465	ENSHGLG00000020936	-	88	79.343	Heterocephalus_glaber_female
ENSODEG00000020110	-	100	99.167	ENSHGLG00100016559	SNRPN	100	99.167	Heterocephalus_glaber_male
ENSODEG00000020110	-	100	82.500	ENSHGLG00100004881	-	88	82.629	Heterocephalus_glaber_male
ENSODEG00000020110	-	89	90.610	ENSHGLG00100021056	-	89	90.141	Heterocephalus_glaber_male
ENSODEG00000020110	-	100	99.167	ENSSTOG00000001339	SNRPN	100	99.167	Ictidomys_tridecemlineatus
ENSODEG00000020110	-	99	99.582	ENSLAFG00000009458	SNRPN	99	99.582	Loxodonta_africana
ENSODEG00000020110	-	100	99.167	ENSMFAG00000042235	SNRPN	100	99.167	Macaca_fascicularis
ENSODEG00000020110	-	100	99.167	ENSMMUG00000023139	SNURF	100	99.167	Macaca_mulatta
ENSODEG00000020110	-	100	99.167	ENSMNEG00000031291	SNRPN	100	99.167	Macaca_nemestrina
ENSODEG00000020110	-	100	99.167	ENSMLEG00000038837	SNRPN	100	99.167	Mandrillus_leucophaeus
ENSODEG00000020110	-	92	85.455	ENSMGAG00000008696	SNRPN	92	85.455	Meleagris_gallopavo
ENSODEG00000020110	-	100	99.167	ENSMAUG00000000051	Snrpn	100	99.167	Mesocricetus_auratus
ENSODEG00000020110	-	100	99.167	ENSMICG00000042356	SNRPN	100	99.167	Microcebus_murinus
ENSODEG00000020110	-	100	99.167	ENSMOCG00000015350	Snrpn	100	99.167	Microtus_ochrogaster
ENSODEG00000020110	-	92	93.665	ENSMODG00000013926	-	92	93.665	Monodelphis_domestica
ENSODEG00000020110	-	100	99.167	MGP_CAROLIEiJ_G0029815	Snrpn	100	99.167	Mus_caroli
ENSODEG00000020110	-	100	99.167	ENSMUSG00000102252	Snrpn	100	99.167	Mus_musculus
ENSODEG00000020110	-	100	99.167	MGP_PahariEiJ_G0013040	Snrpn	100	99.167	Mus_pahari
ENSODEG00000020110	-	100	99.167	MGP_SPRETEiJ_G0030918	Snrpn	100	99.167	Mus_spretus
ENSODEG00000020110	-	88	51.659	ENSMPUG00000007115	-	64	69.718	Mustela_putorius_furo
ENSODEG00000020110	-	100	98.750	ENSMPUG00000014638	-	100	98.750	Mustela_putorius_furo
ENSODEG00000020110	-	99	99.163	ENSMLUG00000023361	-	98	99.163	Myotis_lucifugus
ENSODEG00000020110	-	85	60.784	ENSMLUG00000025849	-	73	62.420	Myotis_lucifugus
ENSODEG00000020110	-	95	62.281	ENSMLUG00000024428	-	62	70.370	Myotis_lucifugus
ENSODEG00000020110	-	100	99.167	ENSNGAG00000000181	Snrpn	100	99.167	Nannospalax_galili
ENSODEG00000020110	-	100	82.917	ENSNLEG00000001376	SNRPN	99	82.917	Nomascus_leucogenys
ENSODEG00000020110	-	100	98.755	ENSOCUG00000003532	-	100	98.755	Oryctolagus_cuniculus
ENSODEG00000020110	-	74	91.525	ENSORLG00020007490	SNRPN	69	92.857	Oryzias_latipes_hni
ENSODEG00000020110	-	74	91.525	ENSORLG00015003332	SNRPN	69	92.857	Oryzias_latipes_hsok
ENSODEG00000020110	-	74	92.090	ENSOMEG00000002066	SNRPN	69	93.452	Oryzias_melastigma
ENSODEG00000020110	-	100	99.167	ENSOGAG00000007392	SNRPN	100	99.167	Otolemur_garnettii
ENSODEG00000020110	-	100	98.750	ENSOARG00000009080	SNRPN	100	98.750	Ovis_aries
ENSODEG00000020110	-	100	99.167	ENSPPAG00000027650	SNRPN	100	99.167	Pan_paniscus
ENSODEG00000020110	-	97	68.803	ENSPPAG00000034049	-	65	79.720	Pan_paniscus
ENSODEG00000020110	-	85	63.902	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSODEG00000020110	-	100	98.750	ENSPPRG00000019878	-	100	98.750	Panthera_pardus
ENSODEG00000020110	-	100	98.333	ENSPTIG00000004537	SNRPN	100	98.333	Panthera_tigris_altaica
ENSODEG00000020110	-	100	99.167	ENSPTRG00000006826	SNRPN	100	99.167	Pan_troglodytes
ENSODEG00000020110	-	97	69.231	ENSPTRG00000052400	-	65	80.420	Pan_troglodytes
ENSODEG00000020110	-	100	99.167	ENSPANG00000020142	SNRPN	100	99.167	Papio_anubis
ENSODEG00000020110	-	100	99.167	ENSPEMG00000012911	-	100	99.167	Peromyscus_maniculatus_bairdii
ENSODEG00000020110	-	89	94.860	ENSPEMG00000020979	-	89	94.836	Peromyscus_maniculatus_bairdii
ENSODEG00000020110	-	89	85.915	ENSPEMG00000013920	-	88	87.324	Peromyscus_maniculatus_bairdii
ENSODEG00000020110	-	76	96.703	ENSPCIG00000004699	-	68	94.340	Phascolarctos_cinereus
ENSODEG00000020110	-	72	93.064	ENSPMEG00000020674	SNRPN	69	92.857	Poecilia_mexicana
ENSODEG00000020110	-	100	99.167	ENSPPYG00000006269	SNURF	100	99.167	Pongo_abelii
ENSODEG00000020110	-	100	99.167	ENSPCOG00000014231	SNRPN	100	99.167	Propithecus_coquereli
ENSODEG00000020110	-	100	99.167	ENSRNOG00000059764	Snrpn	100	99.167	Rattus_norvegicus
ENSODEG00000020110	-	100	99.167	ENSRBIG00000041765	SNRPN	100	99.167	Rhinopithecus_bieti
ENSODEG00000020110	-	100	99.167	ENSRROG00000035157	SNRPN	100	99.167	Rhinopithecus_roxellana
ENSODEG00000020110	-	100	97.917	ENSSBOG00000024929	-	100	97.917	Saimiri_boliviensis_boliviensis
ENSODEG00000020110	-	100	99.167	ENSSBOG00000000110	-	100	99.167	Saimiri_boliviensis_boliviensis
ENSODEG00000020110	-	76	96.703	ENSSHAG00000010257	-	87	94.340	Sarcophilus_harrisii
ENSODEG00000020110	-	99	78.243	ENSSARG00000000072	SNRPN	100	78.243	Sorex_araneus
ENSODEG00000020110	-	100	99.167	ENSSSCG00000028124	SNRPN	100	99.167	Sus_scrofa
ENSODEG00000020110	-	100	98.750	ENSTTRG00000010966	SNRPN	89	98.750	Tursiops_truncatus
ENSODEG00000020110	-	93	98.655	ENSUAMG00000016284	SNRPN	78	98.655	Ursus_americanus
ENSODEG00000020110	-	100	98.750	ENSUMAG00000025589	SNRPN	100	98.750	Ursus_maritimus
ENSODEG00000020110	-	95	98.690	ENSVVUG00000017971	SNRPN	94	98.690	Vulpes_vulpes