EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000020114 (Gene tree)
Gene ID: 101586329
Gene Symbol: -
Alias: -
Full Name: 60S ribosomal protein L39
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 156 bases
Position: chrJH651536.1:1237822-1237977
Accession: 101586329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026656	Ribosomal_L39	PF00832.20	4.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000027179	-	156	XM_004627767	ENSODEP00000026656	51 (aa)	XP_004627824	UPI00033407FC

Gene Model

Click here to download ENSODEG00000020114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000020114's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000020114	-	98	96.000	ENSODEG00000020001	-	85	96.000
ENSODEG00000020114	-	84	97.674	ENSODEG00000019711	-	100	97.674
ENSODEG00000020114	-	100	94.118	ENSODEG00000019694	-	100	94.118
ENSODEG00000020114	-	100	92.157	ENSODEG00000020381	-	100	92.157
ENSODEG00000020114	-	100	92.157	ENSODEG00000018621	-	100	92.157
ENSODEG00000020114	-	94	93.750	ENSODEG00000018785	-	100	93.750
ENSODEG00000020114	-	100	96.078	ENSODEG00000019636	-	88	96.078
ENSODEG00000020114	-	100	90.196	ENSODEG00000018549	-	100	90.196
ENSODEG00000020114	-	100	94.118	ENSODEG00000019498	-	100	94.118
ENSODEG00000020114	-	100	92.157	ENSODEG00000019496	-	100	92.157
ENSODEG00000020114	-	100	94.118	ENSODEG00000020137	-	100	94.118
ENSODEG00000020114	-	100	96.078	ENSODEG00000019750	-	100	96.078
ENSODEG00000020114	-	100	96.078	ENSODEG00000018807	-	100	96.078
ENSODEG00000020114	-	100	96.078	ENSODEG00000019847	-	100	96.078
ENSODEG00000020114	-	100	96.078	ENSODEG00000018797	-	100	96.078
ENSODEG00000020114	-	100	90.196	ENSODEG00000019601	-	100	90.196
ENSODEG00000020114	-	100	96.078	ENSODEG00000002159	-	100	96.078
ENSODEG00000020114	-	100	92.157	ENSODEG00000018633	-	100	92.157
ENSODEG00000020114	-	100	92.157	ENSODEG00000019396	-	100	92.157

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000020114	-	100	98.039	ENSAMEG00000019848	-	100	98.039	Ailuropoda_melanoleuca
ENSODEG00000020114	-	100	96.078	ENSANAG00000016046	-	100	96.078	Aotus_nancymaae
ENSODEG00000020114	-	100	90.196	ENSANAG00000016436	-	100	90.196	Aotus_nancymaae
ENSODEG00000020114	-	100	98.039	ENSANAG00000031418	-	100	98.039	Aotus_nancymaae
ENSODEG00000020114	-	100	96.078	ENSCAFG00020026664	-	100	96.078	Canis_lupus_dingo
ENSODEG00000020114	-	100	96.078	ENSCAFG00020009904	-	100	96.078	Canis_lupus_dingo
ENSODEG00000020114	-	100	94.118	ENSCAFG00020023883	-	100	94.118	Canis_lupus_dingo
ENSODEG00000020114	-	100	94.118	ENSCAFG00020002578	-	100	94.118	Canis_lupus_dingo
ENSODEG00000020114	-	100	90.196	ENSCAFG00020027515	-	100	90.196	Canis_lupus_dingo
ENSODEG00000020114	-	90	89.130	ENSTSYG00000026787	-	82	89.130	Carlito_syrichta
ENSODEG00000020114	-	100	94.118	ENSTSYG00000026785	-	100	94.118	Carlito_syrichta
ENSODEG00000020114	-	100	98.039	ENSCAPG00000007210	-	100	98.039	Cavia_aperea
ENSODEG00000020114	-	100	98.039	ENSCPOG00000036636	-	100	98.039	Cavia_porcellus
ENSODEG00000020114	-	100	92.157	ENSCLAG00000017707	-	100	92.157	Chinchilla_lanigera
ENSODEG00000020114	-	100	96.078	ENSCLAG00000017874	-	100	96.078	Chinchilla_lanigera
ENSODEG00000020114	-	100	92.157	ENSCGRG00001003230	Rpl39l	100	92.157	Cricetulus_griseus_chok1gshd
ENSODEG00000020114	-	100	94.118	ENSCGRG00001012052	-	100	94.118	Cricetulus_griseus_chok1gshd
ENSODEG00000020114	-	100	84.314	ENSCGRG00001008057	-	100	84.314	Cricetulus_griseus_chok1gshd
ENSODEG00000020114	-	100	94.118	ENSCGRG00000019654	-	100	94.118	Cricetulus_griseus_crigri
ENSODEG00000020114	-	100	92.157	ENSCGRG00000018615	Rpl39l	100	92.157	Cricetulus_griseus_crigri
ENSODEG00000020114	-	100	94.118	ENSDORG00000027732	-	100	94.118	Dipodomys_ordii
ENSODEG00000020114	-	100	96.078	ENSDORG00000028485	-	100	96.078	Dipodomys_ordii
ENSODEG00000020114	-	100	73.077	ENSFCAG00000038709	-	91	73.077	Felis_catus
ENSODEG00000020114	-	100	82.353	ENSFCAG00000044333	RPL39L	100	82.353	Felis_catus
ENSODEG00000020114	-	100	94.118	ENSFDAG00000021400	-	100	94.118	Fukomys_damarensis
ENSODEG00000020114	-	92	91.489	ENSGGOG00000040312	-	65	91.489	Gorilla_gorilla
ENSODEG00000020114	-	100	90.196	ENSGGOG00000036596	-	100	90.196	Gorilla_gorilla
ENSODEG00000020114	-	100	94.118	ENSHGLG00000020604	-	100	94.118	Heterocephalus_glaber_female
ENSODEG00000020114	-	100	94.118	ENSHGLG00100011216	-	100	94.118	Heterocephalus_glaber_male
ENSODEG00000020114	-	100	96.078	ENSSTOG00000028051	-	100	96.078	Ictidomys_tridecemlineatus
ENSODEG00000020114	-	100	98.039	ENSSTOG00000030492	-	100	98.039	Ictidomys_tridecemlineatus
ENSODEG00000020114	-	100	90.196	ENSJJAG00000010041	-	100	90.196	Jaculus_jaculus
ENSODEG00000020114	-	100	94.118	ENSLAFG00000028648	-	100	94.118	Loxodonta_africana
ENSODEG00000020114	-	100	96.078	ENSMFAG00000020492	-	100	96.078	Macaca_fascicularis
ENSODEG00000020114	-	100	98.039	ENSMMUG00000044527	-	100	98.039	Macaca_mulatta
ENSODEG00000020114	-	100	92.157	ENSMMUG00000038479	-	100	92.157	Macaca_mulatta
ENSODEG00000020114	-	100	96.078	ENSMMUG00000045452	-	100	96.078	Macaca_mulatta
ENSODEG00000020114	-	100	90.196	ENSMNEG00000001683	-	68	90.196	Macaca_nemestrina
ENSODEG00000020114	-	100	96.078	ENSMNEG00000000126	-	100	96.078	Macaca_nemestrina
ENSODEG00000020114	-	98	96.000	ENSMLEG00000000739	-	100	96.000	Mandrillus_leucophaeus
ENSODEG00000020114	-	100	98.039	ENSMLEG00000003517	-	100	98.039	Mandrillus_leucophaeus
ENSODEG00000020114	-	100	92.157	ENSMLEG00000009433	-	100	92.157	Mandrillus_leucophaeus
ENSODEG00000020114	-	100	96.078	ENSMLEG00000018088	-	100	96.078	Mandrillus_leucophaeus
ENSODEG00000020114	-	100	92.157	ENSMAUG00000002516	-	100	92.157	Mesocricetus_auratus
ENSODEG00000020114	-	100	92.157	ENSMAUG00000015776	Rpl39l	100	92.157	Mesocricetus_auratus
ENSODEG00000020114	-	100	90.196	ENSMOCG00000001545	Rpl39l	100	90.196	Microtus_ochrogaster
ENSODEG00000020114	-	100	98.039	ENSMOCG00000002138	-	100	98.039	Microtus_ochrogaster
ENSODEG00000020114	-	100	94.118	MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	Mus_caroli
ENSODEG00000020114	-	100	94.118	ENSMUSG00000039209	Rpl39l	100	94.118	Mus_musculus
ENSODEG00000020114	-	100	94.118	MGP_SPRETEiJ_G0021332	Rpl39l	100	94.118	Mus_spretus
ENSODEG00000020114	-	100	90.196	ENSMLUG00000015029	-	100	90.196	Myotis_lucifugus
ENSODEG00000020114	-	100	90.196	ENSMLUG00000025012	-	100	90.196	Myotis_lucifugus
ENSODEG00000020114	-	100	92.157	ENSNGAG00000012570	Rpl39l	100	92.157	Nannospalax_galili
ENSODEG00000020114	-	90	89.130	ENSNGAG00000022494	-	96	89.130	Nannospalax_galili
ENSODEG00000020114	-	100	88.235	ENSNGAG00000008665	-	100	88.235	Nannospalax_galili
ENSODEG00000020114	-	100	92.157	ENSOGAG00000024799	-	100	92.157	Otolemur_garnettii
ENSODEG00000020114	-	100	88.235	ENSPPRG00000020779	-	100	88.235	Panthera_pardus
ENSODEG00000020114	-	100	90.196	ENSPTIG00000006209	-	100	90.196	Panthera_tigris_altaica
ENSODEG00000020114	-	98	96.000	ENSPANG00000030226	-	100	96.000	Papio_anubis
ENSODEG00000020114	-	100	94.118	ENSRNOG00000032300	Rpl39l	100	94.118	Rattus_norvegicus
ENSODEG00000020114	-	100	96.078	ENSRBIG00000010842	-	100	96.078	Rhinopithecus_bieti
ENSODEG00000020114	-	100	96.078	ENSRROG00000023025	-	100	96.078	Rhinopithecus_roxellana
ENSODEG00000020114	-	100	96.078	ENSRROG00000037724	-	100	96.078	Rhinopithecus_roxellana
ENSODEG00000020114	-	100	86.275	ENSSSCG00000033224	-	100	86.275	Sus_scrofa
ENSODEG00000020114	-	100	92.157	ENSSSCG00000038385	-	69	92.157	Sus_scrofa
ENSODEG00000020114	-	100	98.039	ENSUAMG00000020990	-	100	98.039	Ursus_americanus
ENSODEG00000020114	-	90	91.304	ENSUAMG00000000067	-	98	91.304	Ursus_americanus
ENSODEG00000020114	-	100	98.039	ENSUMAG00000015280	-	100	98.039	Ursus_maritimus
ENSODEG00000020114	-	100	98.039	ENSVVUG00000030147	-	100	98.039	Vulpes_vulpes
ENSODEG00000020114	-	100	88.235	ENSVVUG00000014095	-	100	88.235	Vulpes_vulpes
ENSODEG00000020114	-	98	94.000	ENSVVUG00000022951	-	100	94.000	Vulpes_vulpes