EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000020162 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 378 bases
Position: chrJH651547.1:2927437-2927814
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026701	LSM	PF01423.22	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000027227	-	378	-	ENSODEP00000026701	125 (aa)	-	-

Gene Model

Click here to download ENSODEG00000020162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000020162's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000020162	-	100	97.619	ENSODEG00000019354	-	100	97.619
ENSODEG00000020162	-	100	96.825	ENSODEG00000008064	-	100	96.825
ENSODEG00000020162	-	57	34.722	ENSODEG00000020549	-	52	34.722
ENSODEG00000020162	-	57	30.556	ENSODEG00000004519	-	54	30.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000020162	-	100	96.825	ENSG00000100028	SNRPD3	100	96.825	Homo_sapiens
ENSODEG00000020162	-	100	96.063	ENSAPOG00000007512	snrpd3l	100	96.063	Acanthochromis_polyacanthus
ENSODEG00000020162	-	100	96.825	ENSAMEG00000013935	SNRPD3	100	96.825	Ailuropoda_melanoleuca
ENSODEG00000020162	-	100	96.063	ENSACIG00000008871	snrpd3l	100	96.063	Amphilophus_citrinellus
ENSODEG00000020162	-	100	96.063	ENSAOCG00000016743	snrpd3l	100	96.063	Amphiprion_ocellaris
ENSODEG00000020162	-	100	96.063	ENSAOCG00000022442	-	100	96.063	Amphiprion_ocellaris
ENSODEG00000020162	-	84	96.226	ENSAOCG00000016759	-	98	96.226	Amphiprion_ocellaris
ENSODEG00000020162	-	100	96.063	ENSAOCG00000008497	SNRPD3	100	96.063	Amphiprion_ocellaris
ENSODEG00000020162	-	100	96.063	ENSAPEG00000006273	snrpd3l	100	96.063	Amphiprion_percula
ENSODEG00000020162	-	84	96.226	ENSAPEG00000006260	-	98	96.226	Amphiprion_percula
ENSODEG00000020162	-	100	96.063	ENSATEG00000020556	snrpd3l	91	96.063	Anabas_testudineus
ENSODEG00000020162	-	100	96.825	ENSAPLG00000008670	SNRPD3	100	96.825	Anas_platyrhynchos
ENSODEG00000020162	-	100	96.825	ENSANAG00000026106	SNRPD3	100	96.825	Aotus_nancymaae
ENSODEG00000020162	-	100	96.063	ENSACLG00000021295	snrpd3l	100	96.063	Astatotilapia_calliptera
ENSODEG00000020162	-	100	89.062	ENSAMXG00000038984	snrpd3l	100	92.188	Astyanax_mexicanus
ENSODEG00000020162	-	100	96.825	ENSBTAG00000021262	SNRPD3	100	96.825	Bos_taurus
ENSODEG00000020162	-	94	59.350	WBGene00004914	snr-1	74	63.000	Caenorhabditis_elegans
ENSODEG00000020162	-	100	96.825	ENSCJAG00000009630	SNRPD3	100	96.825	Callithrix_jacchus
ENSODEG00000020162	-	100	96.032	ENSCAFG00000017258	-	100	96.032	Canis_familiaris
ENSODEG00000020162	-	100	96.825	ENSCAFG00000013864	-	100	96.825	Canis_familiaris
ENSODEG00000020162	-	100	96.825	ENSCAFG00020007165	-	100	96.825	Canis_lupus_dingo
ENSODEG00000020162	-	100	96.825	ENSCHIG00000000057	SNRPD3	100	96.825	Capra_hircus
ENSODEG00000020162	-	100	96.825	ENSTSYG00000007649	SNRPD3	100	96.825	Carlito_syrichta
ENSODEG00000020162	-	100	96.825	ENSCAPG00000016432	-	100	96.825	Cavia_aperea
ENSODEG00000020162	-	100	96.825	ENSCPOG00000033102	-	100	96.825	Cavia_porcellus
ENSODEG00000020162	-	100	96.825	ENSCCAG00000035006	SNRPD3	100	96.825	Cebus_capucinus
ENSODEG00000020162	-	100	96.825	ENSCATG00000038878	SNRPD3	100	96.825	Cercocebus_atys
ENSODEG00000020162	-	100	96.825	ENSCLAG00000011403	SNRPD3	100	96.825	Chinchilla_lanigera
ENSODEG00000020162	-	100	96.825	ENSCSAG00000010694	SNRPD3	100	96.825	Chlorocebus_sabaeus
ENSODEG00000020162	-	100	96.825	ENSCPBG00000002065	SNRPD3	100	96.825	Chrysemys_picta_bellii
ENSODEG00000020162	-	85	77.358	ENSCSAVG00000004708	-	80	77.358	Ciona_savignyi
ENSODEG00000020162	-	100	96.825	ENSCANG00000032106	SNRPD3	100	96.825	Colobus_angolensis_palliatus
ENSODEG00000020162	-	100	96.825	ENSCGRG00001021990	Snrpd3	100	96.825	Cricetulus_griseus_chok1gshd
ENSODEG00000020162	-	100	96.825	ENSCGRG00000004280	Snrpd3	100	96.825	Cricetulus_griseus_crigri
ENSODEG00000020162	-	100	90.551	ENSCVAG00000001276	snrpd3l	100	94.488	Cyprinodon_variegatus
ENSODEG00000020162	-	100	87.402	ENSDARG00000013800	snrpd3	100	88.189	Danio_rerio
ENSODEG00000020162	-	100	91.406	ENSDARG00000076283	snrpd3l	100	92.969	Danio_rerio
ENSODEG00000020162	-	100	96.825	ENSDNOG00000047424	-	100	96.825	Dasypus_novemcinctus
ENSODEG00000020162	-	97	76.230	ENSDNOG00000042638	-	100	76.230	Dasypus_novemcinctus
ENSODEG00000020162	-	100	86.822	ENSDNOG00000018004	-	100	86.822	Dasypus_novemcinctus
ENSODEG00000020162	-	100	73.600	ENSDORG00000027169	-	100	73.600	Dipodomys_ordii
ENSODEG00000020162	-	100	82.540	ENSDORG00000027706	-	100	82.540	Dipodomys_ordii
ENSODEG00000020162	-	87	88.182	ENSDORG00000002800	-	100	88.182	Dipodomys_ordii
ENSODEG00000020162	-	84	80.189	FBgn0023167	SmD3	71	79.439	Drosophila_melanogaster
ENSODEG00000020162	-	100	96.825	ENSEASG00005000273	SNRPD3	100	96.825	Equus_asinus_asinus
ENSODEG00000020162	-	100	96.825	ENSECAG00000023316	SNRPD3	100	96.825	Equus_caballus
ENSODEG00000020162	-	100	93.651	ENSEEUG00000015518	SNRPD3	100	95.238	Erinaceus_europaeus
ENSODEG00000020162	-	100	89.764	ENSELUG00000001854	snrpd3	100	90.551	Esox_lucius
ENSODEG00000020162	-	100	95.276	ENSELUG00000010092	snrpd3l	100	95.276	Esox_lucius
ENSODEG00000020162	-	100	96.825	ENSFCAG00000001512	SNRPD3	100	96.825	Felis_catus
ENSODEG00000020162	-	100	96.825	ENSFALG00000007303	SNRPD3	100	96.825	Ficedula_albicollis
ENSODEG00000020162	-	100	96.825	ENSFDAG00000010772	SNRPD3	100	96.825	Fukomys_damarensis
ENSODEG00000020162	-	100	95.276	ENSFHEG00000010754	snrpd3l	100	95.276	Fundulus_heteroclitus
ENSODEG00000020162	-	100	95.312	ENSGMOG00000008469	snrpd3l	100	95.312	Gadus_morhua
ENSODEG00000020162	-	100	96.825	ENSGALG00000006596	SNRPD3	100	96.825	Gallus_gallus
ENSODEG00000020162	-	84	96.226	ENSGAFG00000006661	snrpd3l	82	96.226	Gambusia_affinis
ENSODEG00000020162	-	100	95.312	ENSGACG00000017533	snrpd3l	100	95.312	Gasterosteus_aculeatus
ENSODEG00000020162	-	100	96.825	ENSGAGG00000023325	SNRPD3	100	96.825	Gopherus_agassizii
ENSODEG00000020162	-	100	96.825	ENSGGOG00000015640	SNRPD3	100	96.825	Gorilla_gorilla
ENSODEG00000020162	-	100	96.063	ENSHBUG00000001332	snrpd3l	100	96.063	Haplochromis_burtoni
ENSODEG00000020162	-	99	93.600	ENSHGLG00000009844	-	99	93.600	Heterocephalus_glaber_female
ENSODEG00000020162	-	100	96.825	ENSHGLG00000016496	SNRPD3	100	96.825	Heterocephalus_glaber_female
ENSODEG00000020162	-	99	93.600	ENSHGLG00100011326	-	99	93.600	Heterocephalus_glaber_male
ENSODEG00000020162	-	100	96.825	ENSHGLG00100019304	SNRPD3	100	96.825	Heterocephalus_glaber_male
ENSODEG00000020162	-	100	95.276	ENSHCOG00000014396	snrpd3l	100	95.276	Hippocampus_comes
ENSODEG00000020162	-	100	91.406	ENSIPUG00000003083	snrpd3	100	92.969	Ictalurus_punctatus
ENSODEG00000020162	-	100	96.825	ENSSTOG00000025674	SNRPD3	100	96.825	Ictidomys_tridecemlineatus
ENSODEG00000020162	-	100	96.825	ENSJJAG00000013303	Snrpd3	100	96.825	Jaculus_jaculus
ENSODEG00000020162	-	100	95.276	ENSKMAG00000012493	snrpd3l	100	95.276	Kryptolebias_marmoratus
ENSODEG00000020162	-	100	96.063	ENSLBEG00000003202	snrpd3l	100	96.063	Labrus_bergylta
ENSODEG00000020162	-	100	96.032	ENSLACG00000015192	SNRPD3	100	96.032	Latimeria_chalumnae
ENSODEG00000020162	-	100	96.063	ENSLOCG00000006978	snrpd3	100	96.063	Lepisosteus_oculatus
ENSODEG00000020162	-	100	96.825	ENSLAFG00000028180	SNRPD3	100	96.825	Loxodonta_africana
ENSODEG00000020162	-	100	96.825	ENSMFAG00000033628	SNRPD3	100	96.825	Macaca_fascicularis
ENSODEG00000020162	-	100	96.825	ENSMMUG00000000264	SNRPD3	100	96.825	Macaca_mulatta
ENSODEG00000020162	-	100	96.825	ENSMNEG00000020857	SNRPD3	100	96.825	Macaca_nemestrina
ENSODEG00000020162	-	100	96.825	ENSMLEG00000037548	SNRPD3	100	96.825	Mandrillus_leucophaeus
ENSODEG00000020162	-	100	96.063	ENSMZEG00005017664	snrpd3l	100	96.063	Maylandia_zebra
ENSODEG00000020162	-	100	96.825	ENSMAUG00000021393	Snrpd3	100	96.825	Mesocricetus_auratus
ENSODEG00000020162	-	100	96.825	ENSMICG00000034782	SNRPD3	100	96.825	Microcebus_murinus
ENSODEG00000020162	-	100	96.825	ENSMOCG00000009361	Snrpd3	100	96.825	Microtus_ochrogaster
ENSODEG00000020162	-	97	86.885	ENSMMOG00000020985	snrpd3l	67	96.226	Mola_mola
ENSODEG00000020162	-	100	96.825	ENSMODG00000004024	SNRPD3	100	96.825	Monodelphis_domestica
ENSODEG00000020162	-	100	96.063	ENSMALG00000013334	snrpd3l	100	96.063	Monopterus_albus
ENSODEG00000020162	-	100	96.825	MGP_CAROLIEiJ_G0015441	Snrpd3	100	96.825	Mus_caroli
ENSODEG00000020162	-	100	96.825	ENSMUSG00000020180	Snrpd3	100	96.825	Mus_musculus
ENSODEG00000020162	-	100	96.825	MGP_PahariEiJ_G0030857	Snrpd3	100	96.825	Mus_pahari
ENSODEG00000020162	-	100	96.825	MGP_SPRETEiJ_G0016254	Snrpd3	100	96.825	Mus_spretus
ENSODEG00000020162	-	100	96.825	ENSMPUG00000002889	SNRPD3	100	96.825	Mustela_putorius_furo
ENSODEG00000020162	-	100	96.825	ENSMLUG00000009838	SNRPD3	100	96.825	Myotis_lucifugus
ENSODEG00000020162	-	100	96.825	ENSNGAG00000010328	Snrpd3	100	96.825	Nannospalax_galili
ENSODEG00000020162	-	100	96.063	ENSNBRG00000020307	snrpd3l	100	96.063	Neolamprologus_brichardi
ENSODEG00000020162	-	100	96.825	ENSNLEG00000035757	SNRPD3	100	96.825	Nomascus_leucogenys
ENSODEG00000020162	-	100	96.825	ENSMEUG00000003772	SNRPD3	100	96.825	Notamacropus_eugenii
ENSODEG00000020162	-	100	96.825	ENSOPRG00000005763	SNRPD3	100	96.825	Ochotona_princeps
ENSODEG00000020162	-	100	96.063	ENSONIG00000003828	snrpd3l	100	96.063	Oreochromis_niloticus
ENSODEG00000020162	-	100	96.825	ENSOANG00000002463	SNRPD3	100	96.825	Ornithorhynchus_anatinus
ENSODEG00000020162	-	100	96.825	ENSOCUG00000004845	SNRPD3	100	96.825	Oryctolagus_cuniculus
ENSODEG00000020162	-	100	96.063	ENSORLG00000010586	snrpd3l	100	96.063	Oryzias_latipes
ENSODEG00000020162	-	100	96.063	ENSORLG00020011769	snrpd3l	100	96.063	Oryzias_latipes_hni
ENSODEG00000020162	-	100	96.063	ENSORLG00015022940	snrpd3l	100	96.063	Oryzias_latipes_hsok
ENSODEG00000020162	-	100	95.276	ENSOMEG00000022734	snrpd3l	100	95.276	Oryzias_melastigma
ENSODEG00000020162	-	100	96.825	ENSOGAG00000012708	SNRPD3	100	96.825	Otolemur_garnettii
ENSODEG00000020162	-	100	96.825	ENSOARG00000013984	SNRPD3	100	96.825	Ovis_aries
ENSODEG00000020162	-	100	96.825	ENSPPAG00000039191	SNRPD3	100	96.825	Pan_paniscus
ENSODEG00000020162	-	100	96.825	ENSPPRG00000001470	SNRPD3	100	96.825	Panthera_pardus
ENSODEG00000020162	-	100	96.825	ENSPTIG00000016610	SNRPD3	100	96.825	Panthera_tigris_altaica
ENSODEG00000020162	-	100	96.825	ENSPTRG00000014176	SNRPD3	100	96.825	Pan_troglodytes
ENSODEG00000020162	-	100	96.825	ENSPANG00000009279	SNRPD3	100	96.825	Papio_anubis
ENSODEG00000020162	-	100	89.764	ENSPKIG00000006412	snrpd3l	100	93.701	Paramormyrops_kingsleyae
ENSODEG00000020162	-	100	95.238	ENSPSIG00000010022	-	100	95.238	Pelodiscus_sinensis
ENSODEG00000020162	-	98	88.618	ENSPMGG00000004486	snrpd3l	100	88.618	Periophthalmus_magnuspinnatus
ENSODEG00000020162	-	100	96.825	ENSPCIG00000010910	SNRPD3	84	96.825	Phascolarctos_cinereus
ENSODEG00000020162	-	100	95.276	ENSPFOG00000019673	snrpd3l	100	95.276	Poecilia_formosa
ENSODEG00000020162	-	100	95.276	ENSPLAG00000023249	snrpd3l	100	95.276	Poecilia_latipinna
ENSODEG00000020162	-	100	95.276	ENSPMEG00000008482	snrpd3l	100	95.276	Poecilia_mexicana
ENSODEG00000020162	-	84	96.226	ENSPREG00000007532	snrpd3l	87	96.226	Poecilia_reticulata
ENSODEG00000020162	-	100	96.825	ENSPPYG00000011648	SNRPD3	100	96.825	Pongo_abelii
ENSODEG00000020162	-	100	96.825	ENSPCAG00000002065	SNRPD3	100	96.825	Procavia_capensis
ENSODEG00000020162	-	100	96.825	ENSPCOG00000011842	SNRPD3	100	96.825	Propithecus_coquereli
ENSODEG00000020162	-	100	96.032	ENSPVAG00000011405	SNRPD3	100	96.032	Pteropus_vampyrus
ENSODEG00000020162	-	100	96.063	ENSPNYG00000013344	snrpd3l	100	96.063	Pundamilia_nyererei
ENSODEG00000020162	-	100	88.189	ENSPNAG00000010547	snrpd3	100	92.126	Pygocentrus_nattereri
ENSODEG00000020162	-	100	88.281	ENSPNAG00000008683	snrpd3l	100	91.406	Pygocentrus_nattereri
ENSODEG00000020162	-	100	96.825	ENSRNOG00000050410	Snrpd3	100	96.825	Rattus_norvegicus
ENSODEG00000020162	-	100	96.825	ENSRBIG00000029017	SNRPD3	100	96.825	Rhinopithecus_bieti
ENSODEG00000020162	-	100	96.825	ENSRROG00000031152	SNRPD3	100	96.825	Rhinopithecus_roxellana
ENSODEG00000020162	-	65	49.383	YLR147C	SMD3	80	49.383	Saccharomyces_cerevisiae
ENSODEG00000020162	-	100	89.764	ENSSFOG00015007002	snrpd3l	100	93.701	Scleropages_formosus
ENSODEG00000020162	-	100	89.764	ENSSFOG00015014180	snrpd3l	100	90.551	Scleropages_formosus
ENSODEG00000020162	-	100	96.063	ENSSMAG00000019307	snrpd3l	100	96.063	Scophthalmus_maximus
ENSODEG00000020162	-	100	96.063	ENSSDUG00000006870	snrpd3l	100	96.063	Seriola_dumerili
ENSODEG00000020162	-	100	96.063	ENSSLDG00000022664	snrpd3l	100	96.063	Seriola_lalandi_dorsalis
ENSODEG00000020162	-	100	96.825	ENSSARG00000002357	SNRPD3	100	96.825	Sorex_araneus
ENSODEG00000020162	-	100	96.032	ENSSPUG00000014285	SNRPD3	100	96.032	Sphenodon_punctatus
ENSODEG00000020162	-	100	96.825	ENSSSCG00000010058	SNRPD3	100	96.825	Sus_scrofa
ENSODEG00000020162	-	100	96.825	ENSTGUG00000010079	SNRPD3	100	96.825	Taeniopygia_guttata
ENSODEG00000020162	-	84	96.226	ENSTRUG00000023976	snrpd3l	90	96.226	Takifugu_rubripes
ENSODEG00000020162	-	100	95.276	ENSTNIG00000005323	snrpd3l	100	95.276	Tetraodon_nigroviridis
ENSODEG00000020162	-	100	96.825	ENSTBEG00000014334	SNRPD3	100	96.825	Tupaia_belangeri
ENSODEG00000020162	-	100	96.825	ENSTTRG00000006022	SNRPD3	100	96.825	Tursiops_truncatus
ENSODEG00000020162	-	100	96.825	ENSUAMG00000010767	SNRPD3	100	96.825	Ursus_americanus
ENSODEG00000020162	-	100	96.825	ENSUMAG00000001670	SNRPD3	100	96.825	Ursus_maritimus
ENSODEG00000020162	-	100	96.825	ENSVPAG00000000241	SNRPD3	100	96.825	Vicugna_pacos
ENSODEG00000020162	-	84	96.226	ENSVVUG00000019340	SNRPD3	53	96.226	Vulpes_vulpes
ENSODEG00000020162	-	100	80.469	ENSXETG00000024918	snrpd3	100	80.469	Xenopus_tropicalis
ENSODEG00000020162	-	100	95.276	ENSXCOG00000004795	snrpd3l	100	95.276	Xiphophorus_couchianus
ENSODEG00000020162	-	100	95.276	ENSXMAG00000001133	snrpd3l	100	95.276	Xiphophorus_maculatus