EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000020231 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1065 bases
Position: chrJH651598.1:7532007-7533071
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026759	RRM_1	PF00076.22	2e-32	1	2
ENSODEP00000026759	RRM_1	PF00076.22	2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000027296	-	1065	-	ENSODEP00000026759	354 (aa)	-	-

Gene Model

Click here to download ENSODEG00000020231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000020231's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000020231	-	50	36.066	ENSODEG00000019306	-	53	37.059
ENSODEG00000020231	-	50	38.235	ENSODEG00000003691	-	51	38.235
ENSODEG00000020231	-	50	34.426	ENSODEG00000000671	-	51	35.294
ENSODEG00000020231	-	58	36.449	ENSODEG00000018537	-	51	37.059
ENSODEG00000020231	-	53	36.250	ENSODEG00000019283	-	50	36.250
ENSODEG00000020231	-	81	57.292	ENSODEG00000006830	HNRNPAB	83	59.794
ENSODEG00000020231	-	50	33.880	ENSODEG00000013694	-	51	34.706
ENSODEG00000020231	-	89	95.223	ENSODEG00000002106	-	80	95.016
ENSODEG00000020231	-	50	33.333	ENSODEG00000006941	-	53	34.118
ENSODEG00000020231	-	85	91.694	ENSODEG00000004187	-	100	91.694
ENSODEG00000020231	-	86	63.194	ENSODEG00000001897	HNRNPD	87	62.199
ENSODEG00000020231	-	57	35.366	ENSODEG00000005746	-	68	35.032
ENSODEG00000020231	-	53	37.500	ENSODEG00000008757	-	60	37.647
ENSODEG00000020231	-	50	35.519	ENSODEG00000005110	-	57	36.471
ENSODEG00000020231	-	50	38.824	ENSODEG00000003755	-	51	38.824
ENSODEG00000020231	-	50	36.066	ENSODEG00000020462	-	53	37.059
ENSODEG00000020231	-	50	33.333	ENSODEG00000013137	-	53	34.118
ENSODEG00000020231	-	50	35.519	ENSODEG00000014833	-	54	36.471
ENSODEG00000020231	-	50	36.066	ENSODEG00000019007	-	53	37.059
ENSODEG00000020231	-	86	93.960	ENSODEG00000003135	-	100	93.960
ENSODEG00000020231	-	95	86.944	ENSODEG00000000376	-	87	90.343
ENSODEG00000020231	-	53	36.923	ENSODEG00000006322	-	86	34.576
ENSODEG00000020231	-	50	34.973	ENSODEG00000019577	-	53	35.882
ENSODEG00000020231	-	69	30.204	ENSODEG00000009329	-	52	30.488
ENSODEG00000020231	-	71	40.856	ENSODEG00000011974	MSI2	53	48.108
ENSODEG00000020231	-	50	38.824	ENSODEG00000016578	-	56	38.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000020231	-	95	92.239	ENSG00000152795	HNRNPDL	100	97.674	Homo_sapiens
ENSODEG00000020231	-	98	86.167	ENSAMEG00000005145	-	91	86.167	Ailuropoda_melanoleuca
ENSODEG00000020231	-	85	75.578	ENSAMEG00000007660	-	100	73.597	Ailuropoda_melanoleuca
ENSODEG00000020231	-	86	92.803	ENSAPLG00000011774	HNRNPDL	99	92.803	Anas_platyrhynchos
ENSODEG00000020231	-	91	91.065	ENSACAG00000010416	HNRNPDL	92	91.065	Anolis_carolinensis
ENSODEG00000020231	-	87	100.000	ENSANAG00000030316	-	93	93.981	Aotus_nancymaae
ENSODEG00000020231	-	95	92.537	ENSANAG00000029054	HNRNPDL	81	93.314	Aotus_nancymaae
ENSODEG00000020231	-	85	90.066	ENSANAG00000038001	-	100	89.404	Aotus_nancymaae
ENSODEG00000020231	-	77	95.455	ENSANAG00000035355	-	100	85.382	Aotus_nancymaae
ENSODEG00000020231	-	93	76.923	ENSANAG00000035255	-	99	76.923	Aotus_nancymaae
ENSODEG00000020231	-	83	72.203	ENSAMXG00000001495	hnrnpdl	96	74.658	Astyanax_mexicanus
ENSODEG00000020231	-	86	97.039	ENSBTAG00000014804	HNRNPDL	81	93.314	Bos_taurus
ENSODEG00000020231	-	95	91.940	ENSCJAG00000015197	-	81	93.023	Callithrix_jacchus
ENSODEG00000020231	-	70	88.306	ENSCJAG00000045227	-	83	87.607	Callithrix_jacchus
ENSODEG00000020231	-	81	82.639	ENSCAFG00000000776	-	100	82.639	Canis_familiaris
ENSODEG00000020231	-	95	92.537	ENSCAFG00000008940	HNRNPDL	81	93.605	Canis_familiaris
ENSODEG00000020231	-	95	92.537	ENSCAFG00020010699	-	81	93.605	Canis_lupus_dingo
ENSODEG00000020231	-	68	78.008	ENSCHIG00000026667	-	80	64.012	Capra_hircus
ENSODEG00000020231	-	86	97.039	ENSCHIG00000010260	-	81	93.314	Capra_hircus
ENSODEG00000020231	-	81	79.514	ENSTSYG00000036907	-	100	79.514	Carlito_syrichta
ENSODEG00000020231	-	86	96.691	ENSTSYG00000031074	-	100	96.691	Carlito_syrichta
ENSODEG00000020231	-	76	80.669	ENSCAPG00000015955	-	100	80.669	Cavia_aperea
ENSODEG00000020231	-	95	86.982	ENSCPOG00000015619	-	80	86.744	Cavia_porcellus
ENSODEG00000020231	-	95	92.537	ENSCCAG00000020777	HNRNPDL	81	93.605	Cebus_capucinus
ENSODEG00000020231	-	95	84.179	ENSCATG00000038573	-	80	85.465	Cercocebus_atys
ENSODEG00000020231	-	58	94.146	ENSCATG00000030349	-	91	94.146	Cercocebus_atys
ENSODEG00000020231	-	85	73.422	ENSCLAG00000010786	-	100	73.422	Chinchilla_lanigera
ENSODEG00000020231	-	97	95.349	ENSCLAG00000008428	HNRNPDL	81	95.349	Chinchilla_lanigera
ENSODEG00000020231	-	95	92.537	ENSCSAG00000004461	HNRNPDL	81	93.605	Chlorocebus_sabaeus
ENSODEG00000020231	-	96	91.445	ENSCHOG00000010831	-	100	91.445	Choloepus_hoffmanni
ENSODEG00000020231	-	86	96.575	ENSCHOG00000000160	-	100	96.575	Choloepus_hoffmanni
ENSODEG00000020231	-	85	94.853	ENSCHOG00000002938	-	100	94.853	Choloepus_hoffmanni
ENSODEG00000020231	-	86	93.156	ENSCHOG00000009204	-	100	93.156	Choloepus_hoffmanni
ENSODEG00000020231	-	96	89.676	ENSCHOG00000003275	-	100	89.676	Choloepus_hoffmanni
ENSODEG00000020231	-	85	92.079	ENSCPBG00000008014	HNRNPDL	100	92.079	Chrysemys_picta_bellii
ENSODEG00000020231	-	86	97.794	ENSCANG00000020228	-	100	97.794	Colobus_angolensis_palliatus
ENSODEG00000020231	-	95	91.124	ENSCGRG00001010960	Hnrnpdl	99	86.478	Cricetulus_griseus_chok1gshd
ENSODEG00000020231	-	86	97.426	ENSCGRG00000011361	-	96	97.426	Cricetulus_griseus_crigri
ENSODEG00000020231	-	85	72.355	ENSDARG00000003429	hnrnpdl	99	73.203	Danio_rerio
ENSODEG00000020231	-	95	93.433	ENSDNOG00000003887	-	81	93.023	Dasypus_novemcinctus
ENSODEG00000020231	-	78	64.388	ENSDNOG00000034016	-	96	63.441	Dasypus_novemcinctus
ENSODEG00000020231	-	83	92.177	ENSDNOG00000033760	-	95	92.177	Dasypus_novemcinctus
ENSODEG00000020231	-	62	100.000	ENSDNOG00000033765	-	90	100.000	Dasypus_novemcinctus
ENSODEG00000020231	-	53	73.438	ENSDNOG00000046422	-	99	73.438	Dasypus_novemcinctus
ENSODEG00000020231	-	86	93.770	ENSDNOG00000018280	-	99	93.770	Dasypus_novemcinctus
ENSODEG00000020231	-	85	89.037	ENSDORG00000024157	-	100	89.037	Dipodomys_ordii
ENSODEG00000020231	-	90	94.953	ENSDORG00000000968	-	81	93.023	Dipodomys_ordii
ENSODEG00000020231	-	65	64.378	ENSETEG00000010820	-	100	63.090	Echinops_telfairi
ENSODEG00000020231	-	86	96.721	ENSEASG00005016276	-	81	92.442	Equus_asinus_asinus
ENSODEG00000020231	-	94	46.839	ENSEASG00005012961	-	99	44.928	Equus_asinus_asinus
ENSODEG00000020231	-	97	90.407	ENSECAG00000022692	HNRNPDL	81	92.733	Equus_caballus
ENSODEG00000020231	-	94	47.024	ENSECAG00000040564	-	99	47.024	Equus_caballus
ENSODEG00000020231	-	95	91.071	ENSEEUG00000004301	-	82	90.725	Erinaceus_europaeus
ENSODEG00000020231	-	85	75.427	ENSELUG00000003241	hnrnpdl	97	75.427	Esox_lucius
ENSODEG00000020231	-	95	92.537	ENSFCAG00000000455	HNRNPDL	81	93.605	Felis_catus
ENSODEG00000020231	-	85	91.060	ENSFALG00000005709	HNRNPDL	100	91.060	Ficedula_albicollis
ENSODEG00000020231	-	86	97.802	ENSFDAG00000000851	-	99	97.802	Fukomys_damarensis
ENSODEG00000020231	-	60	52.336	ENSFDAG00000002891	-	52	55.789	Fukomys_damarensis
ENSODEG00000020231	-	85	91.391	ENSGALG00000023199	HNRNPDL	100	91.391	Gallus_gallus
ENSODEG00000020231	-	85	92.079	ENSGAGG00000003646	HNRNPDL	100	92.079	Gopherus_agassizii
ENSODEG00000020231	-	97	91.570	ENSGGOG00000003714	HNRNPDL	81	93.023	Gorilla_gorilla
ENSODEG00000020231	-	95	94.643	ENSHGLG00000015791	HNRNPDL	81	94.203	Heterocephalus_glaber_female
ENSODEG00000020231	-	81	93.284	ENSHGLG00000013420	-	98	85.000	Heterocephalus_glaber_female
ENSODEG00000020231	-	96	74.336	ENSHGLG00000014427	-	88	94.898	Heterocephalus_glaber_female
ENSODEG00000020231	-	90	78.125	ENSHGLG00100019080	-	98	77.882	Heterocephalus_glaber_male
ENSODEG00000020231	-	86	77.972	ENSHGLG00100010072	-	93	75.874	Heterocephalus_glaber_male
ENSODEG00000020231	-	85	80.731	ENSHGLG00100016282	-	100	77.409	Heterocephalus_glaber_male
ENSODEG00000020231	-	85	81.788	ENSHGLG00100017644	-	100	78.808	Heterocephalus_glaber_male
ENSODEG00000020231	-	96	94.706	ENSHGLG00100005262	HNRNPDL	99	94.706	Heterocephalus_glaber_male
ENSODEG00000020231	-	85	70.447	ENSIPUG00000024951	hnrnpdl	97	72.355	Ictalurus_punctatus
ENSODEG00000020231	-	95	92.262	ENSSTOG00000013979	HNRNPDL	81	93.314	Ictidomys_tridecemlineatus
ENSODEG00000020231	-	87	100.000	ENSJJAG00000000674	-	93	67.257	Jaculus_jaculus
ENSODEG00000020231	-	95	91.988	ENSJJAG00000021673	Hnrnpdl	81	93.064	Jaculus_jaculus
ENSODEG00000020231	-	62	100.000	ENSLACG00000003613	HNRNPDL	85	100.000	Latimeria_chalumnae
ENSODEG00000020231	-	85	76.792	ENSLOCG00000010736	hnrnpdl	97	76.451	Lepisosteus_oculatus
ENSODEG00000020231	-	95	91.691	ENSLAFG00000008612	HNRNPDL	91	97.426	Loxodonta_africana
ENSODEG00000020231	-	74	51.145	ENSLAFG00000031444	-	71	58.602	Loxodonta_africana
ENSODEG00000020231	-	95	92.836	ENSMFAG00000002275	HNRNPDL	81	93.895	Macaca_fascicularis
ENSODEG00000020231	-	85	98.148	ENSMMUG00000015777	HNRNPDL	100	98.148	Macaca_mulatta
ENSODEG00000020231	-	95	92.836	ENSMNEG00000045130	HNRNPDL	81	93.895	Macaca_nemestrina
ENSODEG00000020231	-	85	97.674	ENSMLEG00000041600	HNRNPDL	100	97.674	Mandrillus_leucophaeus
ENSODEG00000020231	-	85	93.688	ENSMLEG00000014825	-	100	93.688	Mandrillus_leucophaeus
ENSODEG00000020231	-	91	91.176	ENSMGAG00000008033	HNRNPDL	100	91.176	Meleagris_gallopavo
ENSODEG00000020231	-	95	92.285	ENSMAUG00000011132	Hnrnpdl	99	85.849	Mesocricetus_auratus
ENSODEG00000020231	-	59	95.192	ENSMICG00000037040	-	89	94.898	Microcebus_murinus
ENSODEG00000020231	-	85	97.342	ENSMICG00000001445	-	81	92.754	Microcebus_murinus
ENSODEG00000020231	-	95	91.988	ENSMOCG00000015928	Hnrnpdl	81	91.908	Microtus_ochrogaster
ENSODEG00000020231	-	95	91.343	ENSMODG00000011916	-	81	90.988	Monodelphis_domestica
ENSODEG00000020231	-	64	100.000	ENSMODG00000006825	-	94	93.878	Monodelphis_domestica
ENSODEG00000020231	-	95	92.262	ENSMUSG00000029328	Hnrnpdl	99	93.558	Mus_musculus
ENSODEG00000020231	-	95	91.667	MGP_PahariEiJ_G0017226	Hnrnpdl	100	93.252	Mus_pahari
ENSODEG00000020231	-	95	92.262	MGP_SPRETEiJ_G0028445	Hnrnpdl	100	93.558	Mus_spretus
ENSODEG00000020231	-	90	89.937	ENSMPUG00000009986	-	97	89.623	Mustela_putorius_furo
ENSODEG00000020231	-	90	73.004	ENSMPUG00000011188	-	99	69.962	Mustela_putorius_furo
ENSODEG00000020231	-	81	75.261	ENSMPUG00000006259	-	100	75.261	Mustela_putorius_furo
ENSODEG00000020231	-	86	97.719	ENSMPUG00000014753	-	99	97.719	Mustela_putorius_furo
ENSODEG00000020231	-	95	91.642	ENSMLUG00000014452	-	81	92.442	Myotis_lucifugus
ENSODEG00000020231	-	82	46.154	ENSMLUG00000030192	-	63	57.377	Myotis_lucifugus
ENSODEG00000020231	-	82	73.103	ENSMLUG00000025989	-	91	72.695	Myotis_lucifugus
ENSODEG00000020231	-	95	92.537	ENSNGAG00000015740	Hnrnpdl	81	92.151	Nannospalax_galili
ENSODEG00000020231	-	95	92.537	ENSNLEG00000008636	HNRNPDL	89	98.000	Nomascus_leucogenys
ENSODEG00000020231	-	69	89.431	ENSMEUG00000011454	-	94	88.889	Notamacropus_eugenii
ENSODEG00000020231	-	95	76.036	ENSMEUG00000010033	HNRNPDL	99	75.444	Notamacropus_eugenii
ENSODEG00000020231	-	86	96.691	ENSOPRG00000007178	-	100	96.691	Ochotona_princeps
ENSODEG00000020231	-	86	97.786	ENSOANG00000004651	HNRNPDL	100	97.786	Ornithorhynchus_anatinus
ENSODEG00000020231	-	62	57.534	ENSOCUG00000025252	-	88	60.938	Oryctolagus_cuniculus
ENSODEG00000020231	-	95	92.537	ENSOCUG00000013805	-	82	92.151	Oryctolagus_cuniculus
ENSODEG00000020231	-	61	87.817	ENSOGAG00000031703	-	81	89.617	Otolemur_garnettii
ENSODEG00000020231	-	84	50.333	ENSOGAG00000024995	-	66	63.212	Otolemur_garnettii
ENSODEG00000020231	-	95	89.552	ENSOGAG00000002501	-	81	91.570	Otolemur_garnettii
ENSODEG00000020231	-	63	95.238	ENSOARG00000011472	-	68	95.238	Ovis_aries
ENSODEG00000020231	-	86	97.794	ENSOARG00000000824	-	84	97.794	Ovis_aries
ENSODEG00000020231	-	68	79.167	ENSOARG00000002402	-	78	80.258	Ovis_aries
ENSODEG00000020231	-	95	92.239	ENSPPAG00000043177	HNRNPDL	81	93.314	Pan_paniscus
ENSODEG00000020231	-	95	92.537	ENSPPRG00000013787	HNRNPDL	81	93.605	Panthera_pardus
ENSODEG00000020231	-	85	97.674	ENSPTIG00000018505	HNRNPDL	100	97.674	Panthera_tigris_altaica
ENSODEG00000020231	-	95	92.239	ENSPTRG00000016217	HNRNPDL	81	93.314	Pan_troglodytes
ENSODEG00000020231	-	95	92.537	ENSPANG00000004761	HNRNPDL	81	93.605	Papio_anubis
ENSODEG00000020231	-	94	75.850	ENSPKIG00000025514	hnrnpdl	97	75.085	Paramormyrops_kingsleyae
ENSODEG00000020231	-	97	84.928	ENSPSIG00000016746	HNRNPDL	99	84.928	Pelodiscus_sinensis
ENSODEG00000020231	-	85	97.059	ENSPEMG00000016545	-	98	91.186	Peromyscus_maniculatus_bairdii
ENSODEG00000020231	-	70	67.068	ENSPCIG00000009814	-	81	68.831	Phascolarctos_cinereus
ENSODEG00000020231	-	51	80.233	ENSPCIG00000008965	-	70	80.233	Phascolarctos_cinereus
ENSODEG00000020231	-	95	91.642	ENSPCIG00000003089	-	81	91.279	Phascolarctos_cinereus
ENSODEG00000020231	-	95	92.537	ENSPPYG00000014886	HNRNPDL	81	93.605	Pongo_abelii
ENSODEG00000020231	-	97	82.267	ENSPCAG00000011543	HNRNPDL	81	82.267	Procavia_capensis
ENSODEG00000020231	-	95	92.239	ENSPCOG00000019831	-	81	93.023	Propithecus_coquereli
ENSODEG00000020231	-	95	83.284	ENSPVAG00000006816	HNRNPDL	81	84.593	Pteropus_vampyrus
ENSODEG00000020231	-	79	72.963	ENSPNAG00000016380	hnrnpdl	90	74.815	Pygocentrus_nattereri
ENSODEG00000020231	-	95	92.285	ENSRNOG00000002270	Hnrnpdl	98	79.370	Rattus_norvegicus
ENSODEG00000020231	-	95	92.537	ENSRBIG00000030310	HNRNPDL	81	93.605	Rhinopithecus_bieti
ENSODEG00000020231	-	95	92.537	ENSRROG00000034174	HNRNPDL	81	93.605	Rhinopithecus_roxellana
ENSODEG00000020231	-	85	80.066	ENSSBOG00000022627	-	100	80.066	Saimiri_boliviensis_boliviensis
ENSODEG00000020231	-	85	89.369	ENSSBOG00000020566	-	100	89.369	Saimiri_boliviensis_boliviensis
ENSODEG00000020231	-	70	75.304	ENSSBOG00000028904	-	99	74.494	Saimiri_boliviensis_boliviensis
ENSODEG00000020231	-	95	91.642	ENSSHAG00000013616	-	90	91.279	Sarcophilus_harrisii
ENSODEG00000020231	-	86	76.792	ENSSFOG00015005893	hnrnpdl	97	76.792	Scleropages_formosus
ENSODEG00000020231	-	77	92.181	ENSSARG00000009961	-	98	92.181	Sorex_araneus
ENSODEG00000020231	-	85	84.818	ENSSPUG00000013700	HNRNPDL	100	85.809	Sphenodon_punctatus
ENSODEG00000020231	-	95	94.030	ENSSSCG00000037245	-	81	93.605	Sus_scrofa
ENSODEG00000020231	-	88	51.592	ENSSSCG00000012473	-	91	49.216	Sus_scrofa
ENSODEG00000020231	-	86	92.279	ENSTGUG00000002850	HNRNPDL	100	92.279	Taeniopygia_guttata
ENSODEG00000020231	-	92	90.549	ENSTBEG00000002817	-	82	92.049	Tupaia_belangeri
ENSODEG00000020231	-	86	92.763	ENSTTRG00000001793	-	81	83.934	Tursiops_truncatus
ENSODEG00000020231	-	95	92.836	ENSUAMG00000011358	HNRNPDL	81	93.895	Ursus_americanus
ENSODEG00000020231	-	96	92.920	ENSUMAG00000008681	HNRNPDL	80	94.395	Ursus_maritimus
ENSODEG00000020231	-	77	76.471	ENSVPAG00000002422	-	100	76.471	Vicugna_pacos
ENSODEG00000020231	-	95	92.239	ENSVVUG00000024653	HNRNPDL	81	93.314	Vulpes_vulpes
ENSODEG00000020231	-	85	87.582	ENSVVUG00000013596	-	100	86.275	Vulpes_vulpes
ENSODEG00000020231	-	63	78.571	ENSVVUG00000001421	-	95	78.571	Vulpes_vulpes
ENSODEG00000020231	-	84	79.333	ENSXETG00000023026	hnrnpdl	100	78.667	Xenopus_tropicalis