EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000020233 (Gene tree)
Gene ID: 101589995
Gene Symbol: -
Alias: -
Full Name: 60S ribosomal protein L13a pseudogene
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 612 bases
Position: chrJH651522.1:13385928-13386539
Accession: 101589995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026761	Ribosomal_L13	PF00572.18	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000027298	-	612	-	ENSODEP00000026761	203 (aa)	-	UPI000333EC50

Gene Model

Click here to download ENSODEG00000020233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000020233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000020233	-	100	97.537	ENSODEG00000019218	-	100	97.537
ENSODEG00000020233	-	100	98.522	ENSODEG00000016831	-	100	98.522
ENSODEG00000020233	-	100	99.015	ENSODEG00000020468	-	100	99.015

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000020233	-	100	96.552	ENSG00000142541	RPL13A	100	96.552	Homo_sapiens
ENSODEG00000020233	-	99	86.000	ENSAPOG00000014084	rpl13a	98	86.000	Acanthochromis_polyacanthus
ENSODEG00000020233	-	100	97.044	ENSAMEG00000014027	RPL13A	100	97.044	Ailuropoda_melanoleuca
ENSODEG00000020233	-	98	85.354	ENSACIG00000004871	rpl13a	99	85.354	Amphilophus_citrinellus
ENSODEG00000020233	-	99	86.000	ENSAOCG00000002123	rpl13a	98	86.000	Amphiprion_ocellaris
ENSODEG00000020233	-	99	86.000	ENSAPEG00000018777	rpl13a	98	86.000	Amphiprion_percula
ENSODEG00000020233	-	99	86.500	ENSATEG00000012828	rpl13a	98	86.500	Anabas_testudineus
ENSODEG00000020233	-	100	88.177	ENSACAG00000017279	RPL13A	100	88.177	Anolis_carolinensis
ENSODEG00000020233	-	70	94.366	ENSANAG00000013769	-	100	94.366	Aotus_nancymaae
ENSODEG00000020233	-	70	79.730	ENSANAG00000037443	-	100	79.730	Aotus_nancymaae
ENSODEG00000020233	-	100	84.314	ENSANAG00000020868	-	100	84.314	Aotus_nancymaae
ENSODEG00000020233	-	100	96.059	ENSANAG00000030530	RPL13A	100	96.059	Aotus_nancymaae
ENSODEG00000020233	-	99	81.188	ENSANAG00000021423	-	100	81.188	Aotus_nancymaae
ENSODEG00000020233	-	99	85.000	ENSACLG00000016552	rpl13a	98	85.000	Astatotilapia_calliptera
ENSODEG00000020233	-	98	85.427	ENSAMXG00000033532	rpl13a	97	85.427	Astyanax_mexicanus
ENSODEG00000020233	-	100	96.059	ENSBTAG00000005296	RPL13A	100	96.059	Bos_taurus
ENSODEG00000020233	-	98	51.515	WBGene00004428	rpl-16	98	51.515	Caenorhabditis_elegans
ENSODEG00000020233	-	100	96.552	ENSCJAG00000000072	-	100	96.552	Callithrix_jacchus
ENSODEG00000020233	-	100	89.163	ENSCJAG00000046649	-	100	89.163	Callithrix_jacchus
ENSODEG00000020233	-	82	80.233	ENSCJAG00000008837	-	98	80.233	Callithrix_jacchus
ENSODEG00000020233	-	100	94.089	ENSCJAG00000040678	-	100	94.089	Callithrix_jacchus
ENSODEG00000020233	-	99	61.500	ENSCAFG00000003946	-	97	61.500	Canis_familiaris
ENSODEG00000020233	-	100	97.044	ENSCAFG00000029892	RPL13A	100	97.044	Canis_familiaris
ENSODEG00000020233	-	100	97.044	ENSCAFG00020024917	-	100	97.044	Canis_lupus_dingo
ENSODEG00000020233	-	100	92.611	ENSCHIG00000012581	-	100	92.611	Capra_hircus
ENSODEG00000020233	-	100	96.059	ENSCHIG00000021732	-	100	96.059	Capra_hircus
ENSODEG00000020233	-	100	96.552	ENSTSYG00000008791	-	100	96.552	Carlito_syrichta
ENSODEG00000020233	-	98	73.869	ENSTSYG00000028115	-	96	76.382	Carlito_syrichta
ENSODEG00000020233	-	98	96.985	ENSCAPG00000007267	RPL13A	100	96.985	Cavia_aperea
ENSODEG00000020233	-	100	97.537	ENSCPOG00000012417	RPL13A	100	97.537	Cavia_porcellus
ENSODEG00000020233	-	62	96.000	ENSCPOG00000023083	-	59	92.481	Cavia_porcellus
ENSODEG00000020233	-	68	95.683	ENSCCAG00000029220	-	96	95.683	Cebus_capucinus
ENSODEG00000020233	-	100	96.552	ENSCCAG00000022898	RPL13A	100	96.552	Cebus_capucinus
ENSODEG00000020233	-	68	90.647	ENSCCAG00000020555	-	100	90.647	Cebus_capucinus
ENSODEG00000020233	-	99	88.614	ENSCCAG00000034479	-	99	88.614	Cebus_capucinus
ENSODEG00000020233	-	100	96.059	ENSCATG00000011576	RPL13A	100	96.059	Cercocebus_atys
ENSODEG00000020233	-	100	98.030	ENSCLAG00000012323	RPL13A	100	98.030	Chinchilla_lanigera
ENSODEG00000020233	-	100	94.581	ENSCSAG00000019054	-	100	94.581	Chlorocebus_sabaeus
ENSODEG00000020233	-	100	86.700	ENSCPBG00000014922	RPL13A	95	86.700	Chrysemys_picta_bellii
ENSODEG00000020233	-	99	62.376	ENSCING00000014892	-	98	62.376	Ciona_intestinalis
ENSODEG00000020233	-	99	64.039	ENSCSAVG00000000666	-	99	64.039	Ciona_savignyi
ENSODEG00000020233	-	100	96.059	ENSCANG00000040885	-	100	96.059	Colobus_angolensis_palliatus
ENSODEG00000020233	-	81	81.928	ENSCANG00000018732	-	100	81.928	Colobus_angolensis_palliatus
ENSODEG00000020233	-	100	95.074	ENSCANG00000000304	-	100	95.074	Colobus_angolensis_palliatus
ENSODEG00000020233	-	100	95.567	ENSCGRG00001018651	-	100	95.567	Cricetulus_griseus_chok1gshd
ENSODEG00000020233	-	100	95.567	ENSCGRG00000005890	-	100	95.567	Cricetulus_griseus_crigri
ENSODEG00000020233	-	99	76.733	ENSCSEG00000002640	rpl13a	98	76.733	Cynoglossus_semilaevis
ENSODEG00000020233	-	99	75.000	ENSCVAG00000011043	rpl13a	97	75.000	Cyprinodon_variegatus
ENSODEG00000020233	-	99	85.500	ENSDARG00000044093	rpl13a	98	85.500	Danio_rerio
ENSODEG00000020233	-	100	96.059	ENSDNOG00000035370	-	100	96.059	Dasypus_novemcinctus
ENSODEG00000020233	-	100	95.567	ENSDORG00000012194	-	100	95.567	Dipodomys_ordii
ENSODEG00000020233	-	99	56.500	FBgn0037351	RpL13A	98	56.500	Drosophila_melanogaster
ENSODEG00000020233	-	100	92.611	ENSETEG00000005732	-	100	92.611	Echinops_telfairi
ENSODEG00000020233	-	100	77.833	ENSETEG00000017076	-	100	77.833	Echinops_telfairi
ENSODEG00000020233	-	98	67.839	ENSEBUG00000007234	rpl13a	100	67.553	Eptatretus_burgeri
ENSODEG00000020233	-	98	95.960	ENSEASG00005005007	RPL13A	86	95.960	Equus_asinus_asinus
ENSODEG00000020233	-	100	96.059	ENSECAG00000015832	RPL13A	100	96.059	Equus_caballus
ENSODEG00000020233	-	74	95.364	ENSEEUG00000014071	RPL13A	74	95.364	Erinaceus_europaeus
ENSODEG00000020233	-	98	85.930	ENSELUG00000014577	rpl13a	97	85.930	Esox_lucius
ENSODEG00000020233	-	100	95.567	ENSFCAG00000009194	RPL13A	100	95.567	Felis_catus
ENSODEG00000020233	-	100	98.030	ENSFDAG00000016892	RPL13A	100	98.030	Fukomys_damarensis
ENSODEG00000020233	-	99	86.000	ENSFHEG00000004165	rpl13a	98	86.000	Fundulus_heteroclitus
ENSODEG00000020233	-	98	84.925	ENSGMOG00000010791	rpl13a	93	84.925	Gadus_morhua
ENSODEG00000020233	-	99	86.000	ENSGAFG00000007578	rpl13a	98	86.000	Gambusia_affinis
ENSODEG00000020233	-	99	85.500	ENSGACG00000009310	rpl13a	99	85.500	Gasterosteus_aculeatus
ENSODEG00000020233	-	94	81.250	ENSGAGG00000002437	RPL13A	74	81.250	Gopherus_agassizii
ENSODEG00000020233	-	100	96.552	ENSGGOG00000002932	RPL13A	100	96.552	Gorilla_gorilla
ENSODEG00000020233	-	100	94.581	ENSGGOG00000023324	-	100	94.581	Gorilla_gorilla
ENSODEG00000020233	-	68	90.647	ENSGGOG00000039250	-	84	90.647	Gorilla_gorilla
ENSODEG00000020233	-	67	91.912	ENSGGOG00000039904	-	72	91.912	Gorilla_gorilla
ENSODEG00000020233	-	99	85.000	ENSHBUG00000023575	rpl13a	98	85.000	Haplochromis_burtoni
ENSODEG00000020233	-	100	98.522	ENSHGLG00000010070	RPL13A	100	98.522	Heterocephalus_glaber_female
ENSODEG00000020233	-	100	98.522	ENSHGLG00100010359	RPL13A	100	98.522	Heterocephalus_glaber_male
ENSODEG00000020233	-	99	85.000	ENSHCOG00000007902	rpl13a	99	85.859	Hippocampus_comes
ENSODEG00000020233	-	98	84.925	ENSIPUG00000014098	rpl13a	94	84.925	Ictalurus_punctatus
ENSODEG00000020233	-	100	94.118	ENSSTOG00000021558	RPL13A	99	95.960	Ictidomys_tridecemlineatus
ENSODEG00000020233	-	100	97.044	ENSJJAG00000000343	-	100	97.044	Jaculus_jaculus
ENSODEG00000020233	-	99	84.500	ENSKMAG00000009039	rpl13a	98	84.500	Kryptolebias_marmoratus
ENSODEG00000020233	-	99	86.000	ENSLBEG00000005434	rpl13a	98	86.000	Labrus_bergylta
ENSODEG00000020233	-	97	81.910	ENSLACG00000019092	RPL13A	95	82.323	Latimeria_chalumnae
ENSODEG00000020233	-	99	86.500	ENSLOCG00000004388	rpl13a	98	86.500	Lepisosteus_oculatus
ENSODEG00000020233	-	100	95.567	ENSLAFG00000016213	RPL13A	100	95.567	Loxodonta_africana
ENSODEG00000020233	-	100	96.059	ENSMFAG00000001097	-	100	96.059	Macaca_fascicularis
ENSODEG00000020233	-	100	86.207	ENSMFAG00000003121	-	100	86.700	Macaca_fascicularis
ENSODEG00000020233	-	100	88.462	ENSMFAG00000002765	-	100	88.462	Macaca_fascicularis
ENSODEG00000020233	-	100	88.942	ENSMMUG00000009018	-	100	88.942	Macaca_mulatta
ENSODEG00000020233	-	100	96.059	ENSMMUG00000007551	RPL13A	100	96.059	Macaca_mulatta
ENSODEG00000020233	-	100	96.059	ENSMNEG00000034977	RPL13A	100	96.059	Macaca_nemestrina
ENSODEG00000020233	-	58	96.610	ENSMLEG00000038132	-	100	96.610	Mandrillus_leucophaeus
ENSODEG00000020233	-	99	85.500	ENSMAMG00000007425	rpl13a	84	85.500	Mastacembelus_armatus
ENSODEG00000020233	-	99	85.000	ENSMZEG00005004952	rpl13a	98	85.000	Maylandia_zebra
ENSODEG00000020233	-	100	82.759	ENSMAUG00000012558	-	100	82.759	Mesocricetus_auratus
ENSODEG00000020233	-	100	95.567	ENSMAUG00000016402	-	100	95.567	Mesocricetus_auratus
ENSODEG00000020233	-	100	90.640	ENSMAUG00000020351	-	100	90.640	Mesocricetus_auratus
ENSODEG00000020233	-	100	75.369	ENSMICG00000043457	-	100	75.369	Microcebus_murinus
ENSODEG00000020233	-	100	97.044	ENSMICG00000009318	-	100	97.044	Microcebus_murinus
ENSODEG00000020233	-	100	76.847	ENSMOCG00000016427	-	100	76.847	Microtus_ochrogaster
ENSODEG00000020233	-	100	95.074	ENSMOCG00000002774	-	100	95.074	Microtus_ochrogaster
ENSODEG00000020233	-	100	85.222	ENSMMOG00000010248	rpl13a	100	85.222	Mola_mola
ENSODEG00000020233	-	99	85.500	ENSMALG00000012804	rpl13a	98	85.500	Monopterus_albus
ENSODEG00000020233	-	100	95.074	MGP_CAROLIEiJ_G0029698	-	100	95.074	Mus_caroli
ENSODEG00000020233	-	100	95.567	ENSMUSG00000074129	Rpl13a	100	95.567	Mus_musculus
ENSODEG00000020233	-	100	95.074	MGP_PahariEiJ_G0012923	-	100	95.074	Mus_pahari
ENSODEG00000020233	-	100	95.567	MGP_SPRETEiJ_G0030796	Rpl13a	100	95.567	Mus_spretus
ENSODEG00000020233	-	100	92.611	MGP_SPRETEiJ_G0017763	-	100	92.611	Mus_spretus
ENSODEG00000020233	-	100	96.552	ENSMPUG00000002604	RPL13A	100	96.552	Mustela_putorius_furo
ENSODEG00000020233	-	98	96.482	ENSMLUG00000004945	RPL13A	98	96.482	Myotis_lucifugus
ENSODEG00000020233	-	100	97.044	ENSNGAG00000021984	-	100	97.044	Nannospalax_galili
ENSODEG00000020233	-	99	85.000	ENSNBRG00000024166	rpl13a	98	85.000	Neolamprologus_brichardi
ENSODEG00000020233	-	100	92.118	ENSNLEG00000033213	-	100	92.118	Nomascus_leucogenys
ENSODEG00000020233	-	100	88.350	ENSNLEG00000005211	RPL13A	100	88.350	Nomascus_leucogenys
ENSODEG00000020233	-	99	90.594	ENSNLEG00000012957	-	98	90.594	Nomascus_leucogenys
ENSODEG00000020233	-	85	81.503	ENSMEUG00000005199	RPL13A	100	81.503	Notamacropus_eugenii
ENSODEG00000020233	-	100	91.626	ENSOPRG00000001194	RPL13A	100	91.626	Ochotona_princeps
ENSODEG00000020233	-	99	84.500	ENSONIG00000003560	rpl13a	98	84.500	Oreochromis_niloticus
ENSODEG00000020233	-	100	92.118	ENSOANG00000000828	RPL13A	100	92.118	Ornithorhynchus_anatinus
ENSODEG00000020233	-	77	84.076	ENSOCUG00000026592	-	97	84.076	Oryctolagus_cuniculus
ENSODEG00000020233	-	99	84.500	ENSORLG00000014599	rpl13a	88	84.500	Oryzias_latipes
ENSODEG00000020233	-	99	84.500	ENSORLG00020013090	rpl13a	88	84.500	Oryzias_latipes_hni
ENSODEG00000020233	-	99	84.577	ENSORLG00015011634	rpl13a	98	84.577	Oryzias_latipes_hsok
ENSODEG00000020233	-	99	85.500	ENSOMEG00000010232	rpl13a	88	85.500	Oryzias_melastigma
ENSODEG00000020233	-	100	89.655	ENSOGAG00000026177	-	100	89.655	Otolemur_garnettii
ENSODEG00000020233	-	100	96.552	ENSOGAG00000004625	-	100	96.552	Otolemur_garnettii
ENSODEG00000020233	-	99	94.089	ENSOGAG00000030280	-	99	94.089	Otolemur_garnettii
ENSODEG00000020233	-	97	78.571	ENSOARG00000017798	-	96	78.571	Ovis_aries
ENSODEG00000020233	-	100	94.581	ENSOARG00000020159	-	100	94.581	Ovis_aries
ENSODEG00000020233	-	99	95.522	ENSOARG00000013169	-	99	95.522	Ovis_aries
ENSODEG00000020233	-	100	94.089	ENSPPAG00000023659	-	100	94.089	Pan_paniscus
ENSODEG00000020233	-	100	92.611	ENSPPAG00000019107	-	100	92.611	Pan_paniscus
ENSODEG00000020233	-	100	96.552	ENSPPAG00000037365	RPL13A	100	96.552	Pan_paniscus
ENSODEG00000020233	-	67	91.912	ENSPPAG00000006023	-	71	91.912	Pan_paniscus
ENSODEG00000020233	-	100	95.567	ENSPPRG00000011265	RPL13A	100	95.567	Panthera_pardus
ENSODEG00000020233	-	70	95.775	ENSPTRG00000042978	-	100	95.775	Pan_troglodytes
ENSODEG00000020233	-	100	92.611	ENSPTRG00000049426	-	100	92.611	Pan_troglodytes
ENSODEG00000020233	-	100	96.552	ENSPTRG00000011298	RPL13A	100	96.552	Pan_troglodytes
ENSODEG00000020233	-	100	95.074	ENSPTRG00000050666	-	100	95.074	Pan_troglodytes
ENSODEG00000020233	-	67	97.037	ENSPTRG00000052284	-	92	97.037	Pan_troglodytes
ENSODEG00000020233	-	100	96.059	ENSPANG00000012050	RPL13A	100	96.059	Papio_anubis
ENSODEG00000020233	-	99	85.000	ENSPKIG00000000720	rpl13a	98	85.000	Paramormyrops_kingsleyae
ENSODEG00000020233	-	98	87.940	ENSPSIG00000018234	RPL13A	100	87.940	Pelodiscus_sinensis
ENSODEG00000020233	-	98	86.432	ENSPMGG00000010552	rpl13a	96	86.432	Periophthalmus_magnuspinnatus
ENSODEG00000020233	-	100	96.059	ENSPEMG00000009221	-	100	96.059	Peromyscus_maniculatus_bairdii
ENSODEG00000020233	-	98	84.925	ENSPMAG00000006362	rpl13a	97	84.925	Petromyzon_marinus
ENSODEG00000020233	-	83	74.556	ENSPCIG00000014063	-	90	74.556	Phascolarctos_cinereus
ENSODEG00000020233	-	100	92.118	ENSPCIG00000007340	-	100	92.118	Phascolarctos_cinereus
ENSODEG00000020233	-	99	85.000	ENSPFOG00000013546	rpl13a	98	85.000	Poecilia_formosa
ENSODEG00000020233	-	99	85.000	ENSPLAG00000016066	rpl13a	98	85.000	Poecilia_latipinna
ENSODEG00000020233	-	99	85.000	ENSPMEG00000018384	rpl13a	98	85.000	Poecilia_mexicana
ENSODEG00000020233	-	99	85.000	ENSPREG00000020079	rpl13a	98	85.000	Poecilia_reticulata
ENSODEG00000020233	-	100	96.552	ENSPPYG00000010251	-	100	96.552	Pongo_abelii
ENSODEG00000020233	-	100	96.552	ENSPPYG00000006798	-	100	96.552	Pongo_abelii
ENSODEG00000020233	-	100	95.567	ENSPCAG00000004086	RPL13A	100	95.567	Procavia_capensis
ENSODEG00000020233	-	100	97.044	ENSPCOG00000023898	RPL13A	100	97.044	Propithecus_coquereli
ENSODEG00000020233	-	98	78.325	ENSPCOG00000016293	-	98	78.325	Propithecus_coquereli
ENSODEG00000020233	-	100	96.059	ENSPVAG00000010958	RPL13A	100	96.059	Pteropus_vampyrus
ENSODEG00000020233	-	99	85.000	ENSPNYG00000019779	rpl13a	98	85.000	Pundamilia_nyererei
ENSODEG00000020233	-	98	85.859	ENSPNAG00000026887	rpl13a	97	85.859	Pygocentrus_nattereri
ENSODEG00000020233	-	100	95.567	ENSRNOG00000062298	Rpl13a	100	95.567	Rattus_norvegicus
ENSODEG00000020233	-	100	95.567	ENSRBIG00000044737	RPL13A	99	95.567	Rhinopithecus_bieti
ENSODEG00000020233	-	100	89.163	ENSRROG00000036041	-	100	89.163	Rhinopithecus_roxellana
ENSODEG00000020233	-	67	87.500	ENSRROG00000028369	-	68	87.500	Rhinopithecus_roxellana
ENSODEG00000020233	-	100	96.059	ENSRROG00000042976	-	100	96.059	Rhinopithecus_roxellana
ENSODEG00000020233	-	92	55.729	YNL069C	RPL16B	97	56.250	Saccharomyces_cerevisiae
ENSODEG00000020233	-	87	60.795	YIL133C	RPL16A	88	60.795	Saccharomyces_cerevisiae
ENSODEG00000020233	-	100	95.567	ENSSBOG00000028481	RPL13A	100	95.567	Saimiri_boliviensis_boliviensis
ENSODEG00000020233	-	100	78.182	ENSSBOG00000024635	-	100	78.182	Saimiri_boliviensis_boliviensis
ENSODEG00000020233	-	98	83.417	ENSSFOG00015001972	rpl13a	98	83.000	Scleropages_formosus
ENSODEG00000020233	-	99	85.500	ENSSDUG00000017181	rpl13a	100	85.930	Seriola_dumerili
ENSODEG00000020233	-	82	59.639	ENSSLDG00000007920	-	85	60.119	Seriola_lalandi_dorsalis
ENSODEG00000020233	-	99	85.500	ENSSLDG00000002561	rpl13a	98	85.500	Seriola_lalandi_dorsalis
ENSODEG00000020233	-	53	72.477	ENSSPUG00000014548	RPL13A	86	72.477	Sphenodon_punctatus
ENSODEG00000020233	-	95	73.438	ENSSSCG00000031204	-	92	77.907	Sus_scrofa
ENSODEG00000020233	-	100	96.078	ENSSSCG00000034448	-	100	96.078	Sus_scrofa
ENSODEG00000020233	-	99	85.500	ENSTRUG00000023611	rpl13a	98	85.500	Takifugu_rubripes
ENSODEG00000020233	-	100	96.059	ENSTTRG00000005485	RPL13A	100	96.059	Tursiops_truncatus
ENSODEG00000020233	-	100	97.044	ENSUAMG00000008438	RPL13A	100	97.044	Ursus_americanus
ENSODEG00000020233	-	100	97.044	ENSUMAG00000002385	RPL13A	100	97.044	Ursus_maritimus
ENSODEG00000020233	-	98	93.939	ENSVPAG00000006564	RPL13A	100	93.939	Vicugna_pacos
ENSODEG00000020233	-	100	97.044	ENSVVUG00000022597	RPL13A	100	97.044	Vulpes_vulpes
ENSODEG00000020233	-	98	90.452	ENSXETG00000014144	rpl13a	86	90.452	Xenopus_tropicalis
ENSODEG00000020233	-	99	86.000	ENSXCOG00000004826	rpl13a	98	86.000	Xiphophorus_couchianus
ENSODEG00000020233	-	99	86.000	ENSXMAG00000027604	rpl13a	98	86.000	Xiphophorus_maculatus