EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000020290 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 261 bases
Position: chrJH651613.1:126786-127046
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026806	LSM	PF01423.22	6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000027355	-	261	-	ENSODEP00000026806	86 (aa)	-	-

Gene Model

Click here to download ENSODEG00000020290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000020290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000020290	-	100	82.558	ENSODEG00000000418	-	90	82.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000020290	-	100	82.558	ENSG00000128534	LSM8	99	83.333	Homo_sapiens
ENSODEG00000020290	-	100	75.581	ENSAPOG00000008649	lsm8	90	75.581	Acanthochromis_polyacanthus
ENSODEG00000020290	-	100	82.558	ENSAMEG00000001162	LSM8	90	82.558	Ailuropoda_melanoleuca
ENSODEG00000020290	-	76	81.538	ENSACIG00000014694	lsm8	87	81.538	Amphilophus_citrinellus
ENSODEG00000020290	-	100	75.581	ENSAOCG00000013926	lsm8	90	75.581	Amphiprion_ocellaris
ENSODEG00000020290	-	100	75.581	ENSAPEG00000023502	lsm8	90	75.581	Amphiprion_percula
ENSODEG00000020290	-	76	81.538	ENSATEG00000023432	lsm8	87	81.538	Anabas_testudineus
ENSODEG00000020290	-	93	80.000	ENSAPLG00000005115	LSM8	81	80.000	Anas_platyrhynchos
ENSODEG00000020290	-	100	82.558	ENSANAG00000027771	LSM8	90	82.558	Aotus_nancymaae
ENSODEG00000020290	-	100	75.581	ENSACLG00000011253	lsm8	90	75.581	Astatotilapia_calliptera
ENSODEG00000020290	-	100	77.907	ENSAMXG00000042902	lsm8	90	77.907	Astyanax_mexicanus
ENSODEG00000020290	-	100	82.558	ENSBTAG00000012649	LSM8	90	82.558	Bos_taurus
ENSODEG00000020290	-	100	55.814	WBGene00003082	lsm-8	88	55.814	Caenorhabditis_elegans
ENSODEG00000020290	-	100	82.558	ENSCJAG00000046406	LSM8	90	82.558	Callithrix_jacchus
ENSODEG00000020290	-	100	82.558	ENSCAFG00000016459	LSM8	87	82.558	Canis_familiaris
ENSODEG00000020290	-	99	81.176	ENSCAFG00020012800	-	66	81.176	Canis_lupus_dingo
ENSODEG00000020290	-	100	82.558	ENSCAFG00020007643	-	90	82.558	Canis_lupus_dingo
ENSODEG00000020290	-	100	76.744	ENSCHIG00000014201	LSM8	89	76.744	Capra_hircus
ENSODEG00000020290	-	100	82.558	ENSTSYG00000032434	LSM8	90	82.558	Carlito_syrichta
ENSODEG00000020290	-	74	81.250	ENSCAPG00000008253	LSM8	86	81.250	Cavia_aperea
ENSODEG00000020290	-	100	82.558	ENSCPOG00000035673	LSM8	90	82.558	Cavia_porcellus
ENSODEG00000020290	-	100	82.558	ENSCCAG00000021329	LSM8	90	82.558	Cebus_capucinus
ENSODEG00000020290	-	100	82.558	ENSCATG00000045302	LSM8	90	82.558	Cercocebus_atys
ENSODEG00000020290	-	100	82.558	ENSCLAG00000003726	LSM8	90	82.558	Chinchilla_lanigera
ENSODEG00000020290	-	100	82.558	ENSCSAG00000010802	-	90	82.558	Chlorocebus_sabaeus
ENSODEG00000020290	-	100	79.070	ENSCSAG00000019007	-	90	79.070	Chlorocebus_sabaeus
ENSODEG00000020290	-	87	84.000	ENSCPBG00000008154	LSM8	77	84.000	Chrysemys_picta_bellii
ENSODEG00000020290	-	100	62.791	ENSCING00000024877	-	90	62.791	Ciona_intestinalis
ENSODEG00000020290	-	100	82.558	ENSCANG00000040728	LSM8	90	82.558	Colobus_angolensis_palliatus
ENSODEG00000020290	-	100	82.558	ENSCGRG00001000450	Lsm8	90	82.558	Cricetulus_griseus_chok1gshd
ENSODEG00000020290	-	87	84.000	ENSCGRG00000005587	Lsm8	88	84.000	Cricetulus_griseus_crigri
ENSODEG00000020290	-	100	63.953	ENSCSEG00000004164	lsm8	89	63.953	Cynoglossus_semilaevis
ENSODEG00000020290	-	100	74.419	ENSCVAG00000020547	lsm8	90	74.419	Cyprinodon_variegatus
ENSODEG00000020290	-	100	74.419	ENSDARG00000091656	lsm8	90	74.419	Danio_rerio
ENSODEG00000020290	-	100	82.558	ENSDNOG00000034613	LSM8	90	82.558	Dasypus_novemcinctus
ENSODEG00000020290	-	100	82.558	ENSDORG00000027868	Lsm8	90	82.558	Dipodomys_ordii
ENSODEG00000020290	-	98	60.714	FBgn0035271	CG2021	88	60.714	Drosophila_melanogaster
ENSODEG00000020290	-	100	82.558	ENSETEG00000011594	LSM8	90	82.558	Echinops_telfairi
ENSODEG00000020290	-	74	76.562	ENSEBUG00000012017	lsm8	86	76.562	Eptatretus_burgeri
ENSODEG00000020290	-	100	82.558	ENSEASG00005008932	LSM8	56	82.558	Equus_asinus_asinus
ENSODEG00000020290	-	100	76.744	ENSECAG00000024025	LSM8	76	76.744	Equus_caballus
ENSODEG00000020290	-	100	75.581	ENSELUG00000010138	lsm8	90	75.581	Esox_lucius
ENSODEG00000020290	-	93	62.500	ENSFCAG00000044794	-	81	62.500	Felis_catus
ENSODEG00000020290	-	100	82.558	ENSFCAG00000036620	-	90	82.558	Felis_catus
ENSODEG00000020290	-	100	82.558	ENSFALG00000010023	LSM8	90	82.558	Ficedula_albicollis
ENSODEG00000020290	-	100	82.558	ENSFDAG00000019530	LSM8	90	82.558	Fukomys_damarensis
ENSODEG00000020290	-	100	75.581	ENSFHEG00000013729	lsm8	90	75.581	Fundulus_heteroclitus
ENSODEG00000020290	-	100	82.558	ENSGALG00000009110	LSM8	90	82.558	Gallus_gallus
ENSODEG00000020290	-	100	74.419	ENSGAFG00000001135	lsm8	90	74.419	Gambusia_affinis
ENSODEG00000020290	-	100	82.558	ENSGAGG00000017366	LSM8	90	82.558	Gopherus_agassizii
ENSODEG00000020290	-	100	82.558	ENSGGOG00000041883	LSM8	90	82.558	Gorilla_gorilla
ENSODEG00000020290	-	100	75.581	ENSHBUG00000003646	lsm8	90	75.581	Haplochromis_burtoni
ENSODEG00000020290	-	79	80.882	ENSHGLG00000001988	-	99	80.882	Heterocephalus_glaber_female
ENSODEG00000020290	-	100	79.070	ENSHGLG00000019782	-	90	79.070	Heterocephalus_glaber_female
ENSODEG00000020290	-	100	79.070	ENSHGLG00100012166	-	89	79.070	Heterocephalus_glaber_male
ENSODEG00000020290	-	100	81.395	ENSHGLG00100003934	-	86	81.395	Heterocephalus_glaber_male
ENSODEG00000020290	-	100	74.419	ENSHCOG00000005037	lsm8	90	74.419	Hippocampus_comes
ENSODEG00000020290	-	100	77.907	ENSIPUG00000019811	NAA38	90	77.907	Ictalurus_punctatus
ENSODEG00000020290	-	100	82.558	ENSSTOG00000009039	LSM8	90	82.558	Ictidomys_tridecemlineatus
ENSODEG00000020290	-	91	78.205	ENSSTOG00000034801	-	72	78.205	Ictidomys_tridecemlineatus
ENSODEG00000020290	-	100	82.558	ENSJJAG00000009031	Lsm8	89	82.558	Jaculus_jaculus
ENSODEG00000020290	-	100	75.581	ENSKMAG00000018983	lsm8	90	75.581	Kryptolebias_marmoratus
ENSODEG00000020290	-	100	77.907	ENSLACG00000010231	LSM8	90	77.907	Latimeria_chalumnae
ENSODEG00000020290	-	100	76.744	ENSLOCG00000015580	lsm8	90	76.744	Lepisosteus_oculatus
ENSODEG00000020290	-	100	81.609	ENSLAFG00000011242	LSM8	90	81.609	Loxodonta_africana
ENSODEG00000020290	-	100	82.558	ENSMFAG00000035798	LSM8	90	82.558	Macaca_fascicularis
ENSODEG00000020290	-	100	79.070	ENSMFAG00000013044	-	90	79.070	Macaca_fascicularis
ENSODEG00000020290	-	100	82.558	ENSMMUG00000046401	LSM8	86	79.688	Macaca_mulatta
ENSODEG00000020290	-	76	80.000	ENSMNEG00000011141	-	87	80.000	Macaca_nemestrina
ENSODEG00000020290	-	100	82.558	ENSMNEG00000036764	-	90	82.558	Macaca_nemestrina
ENSODEG00000020290	-	100	68.605	ENSMLEG00000039324	-	89	68.605	Mandrillus_leucophaeus
ENSODEG00000020290	-	100	82.558	ENSMLEG00000035828	-	90	82.558	Mandrillus_leucophaeus
ENSODEG00000020290	-	76	81.538	ENSMAMG00000018839	lsm8	87	81.538	Mastacembelus_armatus
ENSODEG00000020290	-	100	75.581	ENSMZEG00005019138	lsm8	90	75.581	Maylandia_zebra
ENSODEG00000020290	-	100	82.558	ENSMGAG00000008808	LSM8	90	82.558	Meleagris_gallopavo
ENSODEG00000020290	-	100	82.558	ENSMAUG00000015721	-	91	82.558	Mesocricetus_auratus
ENSODEG00000020290	-	72	75.806	ENSMAUG00000020287	-	86	73.438	Mesocricetus_auratus
ENSODEG00000020290	-	100	63.953	ENSMAUG00000015356	-	88	63.953	Mesocricetus_auratus
ENSODEG00000020290	-	100	82.558	ENSMICG00000042730	LSM8	90	82.558	Microcebus_murinus
ENSODEG00000020290	-	100	82.558	ENSMOCG00000001688	Lsm8	90	82.558	Microtus_ochrogaster
ENSODEG00000020290	-	76	81.538	ENSMMOG00000006046	lsm8	87	81.538	Mola_mola
ENSODEG00000020290	-	72	83.871	ENSMODG00000015729	LSM8	79	83.871	Monodelphis_domestica
ENSODEG00000020290	-	100	76.744	ENSMALG00000000405	lsm8	90	76.744	Monopterus_albus
ENSODEG00000020290	-	100	82.558	MGP_CAROLIEiJ_G0028125	-	90	82.558	Mus_caroli
ENSODEG00000020290	-	100	82.558	ENSMUSG00000044155	Lsm8	90	82.558	Mus_musculus
ENSODEG00000020290	-	100	82.558	MGP_PahariEiJ_G0021881	Lsm8	90	82.558	Mus_pahari
ENSODEG00000020290	-	100	82.558	MGP_SPRETEiJ_G0029125	-	90	82.558	Mus_spretus
ENSODEG00000020290	-	100	82.558	ENSMLUG00000006837	-	90	82.558	Myotis_lucifugus
ENSODEG00000020290	-	100	81.395	ENSMLUG00000027762	-	90	81.395	Myotis_lucifugus
ENSODEG00000020290	-	100	82.558	ENSNGAG00000016554	Lsm8	90	82.558	Nannospalax_galili
ENSODEG00000020290	-	100	75.581	ENSNBRG00000014441	lsm8	90	75.581	Neolamprologus_brichardi
ENSODEG00000020290	-	100	82.558	ENSNLEG00000011768	LSM8	90	82.558	Nomascus_leucogenys
ENSODEG00000020290	-	100	75.581	ENSMEUG00000007801	LSM8	89	75.581	Notamacropus_eugenii
ENSODEG00000020290	-	87	84.000	ENSOPRG00000014809	LSM8	88	84.000	Ochotona_princeps
ENSODEG00000020290	-	100	81.395	ENSOANG00000014536	LSM8	90	81.395	Ornithorhynchus_anatinus
ENSODEG00000020290	-	100	81.609	ENSOCUG00000017359	LSM8	90	81.609	Oryctolagus_cuniculus
ENSODEG00000020290	-	100	66.279	ENSORLG00000017432	lsm8	89	66.279	Oryzias_latipes
ENSODEG00000020290	-	100	66.279	ENSORLG00020004376	lsm8	89	66.279	Oryzias_latipes_hni
ENSODEG00000020290	-	100	75.581	ENSORLG00015003757	lsm8	90	75.581	Oryzias_latipes_hsok
ENSODEG00000020290	-	100	62.791	ENSOMEG00000022509	lsm8	89	63.953	Oryzias_melastigma
ENSODEG00000020290	-	100	82.558	ENSOGAG00000013377	LSM8	90	82.558	Otolemur_garnettii
ENSODEG00000020290	-	100	82.558	ENSOARG00000017974	LSM8	90	82.558	Ovis_aries
ENSODEG00000020290	-	76	83.077	ENSPPAG00000043228	-	87	83.077	Pan_paniscus
ENSODEG00000020290	-	100	82.558	ENSPPRG00000006444	LSM8	90	82.558	Panthera_pardus
ENSODEG00000020290	-	100	82.558	ENSPTIG00000004722	LSM8	92	83.333	Panthera_tigris_altaica
ENSODEG00000020290	-	76	83.077	ENSPTRG00000046596	-	87	83.077	Pan_troglodytes
ENSODEG00000020290	-	100	82.558	ENSPANG00000035470	-	90	82.558	Papio_anubis
ENSODEG00000020290	-	100	77.907	ENSPANG00000019395	-	90	77.907	Papio_anubis
ENSODEG00000020290	-	87	82.667	ENSPKIG00000006092	lsm8	76	82.667	Paramormyrops_kingsleyae
ENSODEG00000020290	-	76	83.077	ENSPSIG00000017054	LSM8	87	83.077	Pelodiscus_sinensis
ENSODEG00000020290	-	76	81.538	ENSPMGG00000016442	lsm8	87	81.538	Periophthalmus_magnuspinnatus
ENSODEG00000020290	-	74	79.688	ENSPEMG00000009153	Lsm8	86	79.688	Peromyscus_maniculatus_bairdii
ENSODEG00000020290	-	100	82.558	ENSPCIG00000021467	LSM8	91	82.558	Phascolarctos_cinereus
ENSODEG00000020290	-	100	74.419	ENSPFOG00000012340	lsm8	90	74.419	Poecilia_formosa
ENSODEG00000020290	-	100	70.930	ENSPLAG00000000516	lsm8	90	70.930	Poecilia_latipinna
ENSODEG00000020290	-	100	74.419	ENSPMEG00000022567	lsm8	90	74.419	Poecilia_mexicana
ENSODEG00000020290	-	73	70.000	ENSPREG00000005527	lsm8	63	70.000	Poecilia_reticulata
ENSODEG00000020290	-	100	82.558	ENSPPYG00000017942	LSM8	90	82.558	Pongo_abelii
ENSODEG00000020290	-	100	82.558	ENSPCOG00000003309	-	90	82.558	Propithecus_coquereli
ENSODEG00000020290	-	100	65.116	ENSPCOG00000017982	-	88	65.116	Propithecus_coquereli
ENSODEG00000020290	-	87	82.667	ENSPVAG00000000990	LSM8	88	82.667	Pteropus_vampyrus
ENSODEG00000020290	-	100	75.581	ENSPNYG00000011448	lsm8	90	75.581	Pundamilia_nyererei
ENSODEG00000020290	-	100	77.907	ENSPNAG00000010252	lsm8	90	77.907	Pygocentrus_nattereri
ENSODEG00000020290	-	100	82.558	ENSRNOG00000058677	Lsm8	90	82.558	Rattus_norvegicus
ENSODEG00000020290	-	100	82.558	ENSRBIG00000032851	LSM8	90	82.558	Rhinopithecus_bieti
ENSODEG00000020290	-	100	82.558	ENSRROG00000039618	LSM8	90	82.558	Rhinopithecus_roxellana
ENSODEG00000020290	-	100	82.558	ENSSBOG00000023223	LSM8	90	82.558	Saimiri_boliviensis_boliviensis
ENSODEG00000020290	-	100	82.558	ENSSHAG00000018435	-	90	82.558	Sarcophilus_harrisii
ENSODEG00000020290	-	100	74.419	ENSSFOG00015004412	lsm8	90	74.419	Scleropages_formosus
ENSODEG00000020290	-	76	80.000	ENSSMAG00000009458	lsm8	87	80.000	Scophthalmus_maximus
ENSODEG00000020290	-	100	75.581	ENSSDUG00000014702	lsm8	90	75.581	Seriola_dumerili
ENSODEG00000020290	-	76	81.538	ENSSLDG00000016870	lsm8	87	81.538	Seriola_lalandi_dorsalis
ENSODEG00000020290	-	72	82.258	ENSSARG00000009628	-	86	82.258	Sorex_araneus
ENSODEG00000020290	-	100	82.558	ENSSPUG00000017419	LSM8	90	82.558	Sphenodon_punctatus
ENSODEG00000020290	-	100	75.581	ENSSPAG00000021422	lsm8	90	75.581	Stegastes_partitus
ENSODEG00000020290	-	100	82.558	ENSSSCG00000021652	LSM8	90	82.558	Sus_scrofa
ENSODEG00000020290	-	100	81.395	ENSTGUG00000004730	-	90	81.395	Taeniopygia_guttata
ENSODEG00000020290	-	100	81.395	ENSTGUG00000016823	-	90	81.395	Taeniopygia_guttata
ENSODEG00000020290	-	100	75.581	ENSTRUG00000025192	lsm8	90	75.581	Takifugu_rubripes
ENSODEG00000020290	-	100	75.581	ENSTNIG00000002864	lsm8	90	75.581	Tetraodon_nigroviridis
ENSODEG00000020290	-	100	82.558	ENSTTRG00000001023	LSM8	90	82.558	Tursiops_truncatus
ENSODEG00000020290	-	100	76.744	ENSUAMG00000006943	-	88	76.744	Ursus_americanus
ENSODEG00000020290	-	100	76.744	ENSUMAG00000003073	LSM8	89	76.744	Ursus_maritimus
ENSODEG00000020290	-	100	82.558	ENSVPAG00000001530	LSM8	90	82.558	Vicugna_pacos
ENSODEG00000020290	-	76	84.615	ENSVVUG00000013248	-	71	84.615	Vulpes_vulpes
ENSODEG00000020290	-	92	82.278	ENSXETG00000021829	lsm8	81	82.278	Xenopus_tropicalis
ENSODEG00000020290	-	100	75.581	ENSXCOG00000012938	lsm8	89	75.581	Xiphophorus_couchianus
ENSODEG00000020290	-	100	74.419	ENSXMAG00000025919	lsm8	90	74.419	Xiphophorus_maculatus