EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000020349 (Gene tree)
Gene ID: 101580252
Gene Symbol: -
Alias: -
Full Name: 28S ribosomal protein S18c%2C mitochondrial-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 435 bases
Position: chrJH651607.1:8803431-8803865
Accession: 101580252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026859	Ribosomal_S18	PF01084.20	1.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000027414	-	435	XM_012516122	ENSODEP00000026859	144 (aa)	XP_023578350	UPI000C9ED305

Gene Model

Click here to download ENSODEG00000020349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000020349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000020349	-	100	97.945	ENSODEG00000007599	-	100	97.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000020349	-	100	84.028	ENSG00000163319	MRPS18C	100	84.028	Homo_sapiens
ENSODEG00000020349	-	100	74.306	ENSAMEG00000004915	MRPS18C	100	74.306	Ailuropoda_melanoleuca
ENSODEG00000020349	-	99	70.667	ENSANAG00000025323	-	95	70.667	Aotus_nancymaae
ENSODEG00000020349	-	100	72.222	ENSANAG00000028055	-	100	72.222	Aotus_nancymaae
ENSODEG00000020349	-	100	54.861	ENSBTAG00000049836	-	100	54.861	Bos_taurus
ENSODEG00000020349	-	100	77.083	ENSBTAG00000018155	MRPS18C	100	77.083	Bos_taurus
ENSODEG00000020349	-	100	81.944	ENSCJAG00000042247	MRPS18C	97	81.944	Callithrix_jacchus
ENSODEG00000020349	-	100	79.861	ENSCAFG00020010491	MRPS18C	100	79.861	Canis_lupus_dingo
ENSODEG00000020349	-	76	67.273	ENSCHIG00000019359	-	100	67.273	Capra_hircus
ENSODEG00000020349	-	100	64.583	ENSCHIG00000018805	-	100	64.583	Capra_hircus
ENSODEG00000020349	-	91	82.443	ENSCHIG00000004461	-	91	82.443	Capra_hircus
ENSODEG00000020349	-	100	67.361	ENSCHIG00000022740	-	100	67.361	Capra_hircus
ENSODEG00000020349	-	100	50.694	ENSCHIG00000016551	-	100	50.694	Capra_hircus
ENSODEG00000020349	-	100	80.556	ENSTSYG00000012924	MRPS18C	100	80.556	Carlito_syrichta
ENSODEG00000020349	-	100	84.028	ENSCPOG00000009198	MRPS18C	100	84.028	Cavia_porcellus
ENSODEG00000020349	-	100	81.250	ENSCCAG00000026577	-	100	81.250	Cebus_capucinus
ENSODEG00000020349	-	99	69.930	ENSCCAG00000025155	-	95	69.930	Cebus_capucinus
ENSODEG00000020349	-	100	71.528	ENSCCAG00000028283	-	100	71.528	Cebus_capucinus
ENSODEG00000020349	-	100	79.167	ENSCCAG00000019347	-	100	79.167	Cebus_capucinus
ENSODEG00000020349	-	100	83.333	ENSCATG00000040697	MRPS18C	100	83.333	Cercocebus_atys
ENSODEG00000020349	-	100	90.278	ENSCLAG00000017397	-	100	90.278	Chinchilla_lanigera
ENSODEG00000020349	-	100	88.356	ENSCLAG00000008205	-	100	88.356	Chinchilla_lanigera
ENSODEG00000020349	-	100	70.139	ENSCANG00000041165	-	100	70.139	Colobus_angolensis_palliatus
ENSODEG00000020349	-	100	83.333	ENSCANG00000038907	MRPS18C	100	83.333	Colobus_angolensis_palliatus
ENSODEG00000020349	-	99	62.238	ENSCANG00000037347	-	100	59.722	Colobus_angolensis_palliatus
ENSODEG00000020349	-	100	80.556	ENSCGRG00001000103	Mrps18c	100	80.556	Cricetulus_griseus_chok1gshd
ENSODEG00000020349	-	100	80.556	ENSCGRG00000002192	Mrps18c	100	80.556	Cricetulus_griseus_crigri
ENSODEG00000020349	-	99	78.169	ENSDORG00000012749	Mrps18c	100	78.169	Dipodomys_ordii
ENSODEG00000020349	-	100	52.083	ENSETEG00000012223	-	100	52.083	Echinops_telfairi
ENSODEG00000020349	-	100	83.333	ENSEASG00005013234	MRPS18C	100	83.333	Equus_asinus_asinus
ENSODEG00000020349	-	100	84.028	ENSECAG00000020387	MRPS18C	100	84.028	Equus_caballus
ENSODEG00000020349	-	100	56.944	ENSEEUG00000003504	MRPS18C	99	56.944	Erinaceus_europaeus
ENSODEG00000020349	-	100	81.944	ENSFCAG00000042464	MRPS18C	100	81.944	Felis_catus
ENSODEG00000020349	-	100	73.611	ENSFDAG00000008778	-	100	73.611	Fukomys_damarensis
ENSODEG00000020349	-	100	85.417	ENSFDAG00000000250	-	100	85.417	Fukomys_damarensis
ENSODEG00000020349	-	100	56.944	ENSGGOG00000037903	-	100	56.944	Gorilla_gorilla
ENSODEG00000020349	-	100	71.528	ENSGGOG00000008603	MRPS18C	100	71.528	Gorilla_gorilla
ENSODEG00000020349	-	100	61.806	ENSGGOG00000040785	-	100	61.806	Gorilla_gorilla
ENSODEG00000020349	-	100	81.944	ENSHGLG00000020134	-	100	81.944	Heterocephalus_glaber_female
ENSODEG00000020349	-	100	79.167	ENSHGLG00000012671	-	98	79.167	Heterocephalus_glaber_female
ENSODEG00000020349	-	100	85.616	ENSHGLG00000002953	-	100	85.616	Heterocephalus_glaber_female
ENSODEG00000020349	-	100	85.616	ENSHGLG00100016235	-	100	85.616	Heterocephalus_glaber_male
ENSODEG00000020349	-	100	79.167	ENSHGLG00100015568	-	98	79.167	Heterocephalus_glaber_male
ENSODEG00000020349	-	100	81.944	ENSHGLG00100019678	-	100	81.944	Heterocephalus_glaber_male
ENSODEG00000020349	-	100	84.028	ENSSTOG00000007989	MRPS18C	100	84.028	Ictidomys_tridecemlineatus
ENSODEG00000020349	-	100	80.556	ENSLAFG00000001059	MRPS18C	100	80.556	Loxodonta_africana
ENSODEG00000020349	-	100	82.639	ENSMFAG00000003991	MRPS18C	100	82.639	Macaca_fascicularis
ENSODEG00000020349	-	100	68.056	ENSMFAG00000041276	-	100	68.056	Macaca_fascicularis
ENSODEG00000020349	-	100	74.306	ENSMMUG00000039146	-	100	74.306	Macaca_mulatta
ENSODEG00000020349	-	100	65.278	ENSMMUG00000015353	MRPS18C	100	65.278	Macaca_mulatta
ENSODEG00000020349	-	100	74.306	ENSMMUG00000048717	-	100	74.306	Macaca_mulatta
ENSODEG00000020349	-	100	64.583	ENSMNEG00000018700	-	100	64.583	Macaca_nemestrina
ENSODEG00000020349	-	100	82.639	ENSMNEG00000043663	MRPS18C	100	82.639	Macaca_nemestrina
ENSODEG00000020349	-	100	83.333	ENSMLEG00000038884	MRPS18C	100	83.333	Mandrillus_leucophaeus
ENSODEG00000020349	-	100	77.778	ENSMICG00000032609	-	100	77.778	Microcebus_murinus
ENSODEG00000020349	-	100	59.722	ENSMICG00000037615	-	100	59.722	Microcebus_murinus
ENSODEG00000020349	-	100	79.861	ENSMOCG00000015591	-	100	79.861	Microtus_ochrogaster
ENSODEG00000020349	-	100	78.472	ENSMOCG00000009898	-	100	78.472	Microtus_ochrogaster
ENSODEG00000020349	-	99	71.528	ENSMODG00000020773	MRPS18C	100	71.528	Monodelphis_domestica
ENSODEG00000020349	-	100	76.027	MGP_CAROLIEiJ_G0027458	Mrps18c	100	76.027	Mus_caroli
ENSODEG00000020349	-	100	76.027	ENSMUSG00000016833	Mrps18c	100	76.027	Mus_musculus
ENSODEG00000020349	-	100	76.712	MGP_PahariEiJ_G0017236	Mrps18c	100	76.712	Mus_pahari
ENSODEG00000020349	-	83	72.951	MGP_SPRETEiJ_G0028455	Mrps18c	93	72.951	Mus_spretus
ENSODEG00000020349	-	100	78.472	ENSMLUG00000017057	MRPS18C	100	78.472	Myotis_lucifugus
ENSODEG00000020349	-	86	85.484	ENSNGAG00000015980	Mrps18c	100	81.944	Nannospalax_galili
ENSODEG00000020349	-	100	77.778	ENSNLEG00000018188	-	100	77.778	Nomascus_leucogenys
ENSODEG00000020349	-	100	83.333	ENSNLEG00000009119	MRPS18C	100	83.333	Nomascus_leucogenys
ENSODEG00000020349	-	69	78.788	ENSOPRG00000004113	MRPS18C	68	78.788	Ochotona_princeps
ENSODEG00000020349	-	100	77.778	ENSOARG00000002770	MRPS18C	100	77.778	Ovis_aries
ENSODEG00000020349	-	100	56.944	ENSPPAG00000037400	-	100	56.944	Pan_paniscus
ENSODEG00000020349	-	100	84.028	ENSPPAG00000037122	MRPS18C	100	84.028	Pan_paniscus
ENSODEG00000020349	-	100	81.250	ENSPPRG00000011089	MRPS18C	100	81.250	Panthera_pardus
ENSODEG00000020349	-	100	80.556	ENSPTIG00000021242	MRPS18C	100	80.556	Panthera_tigris_altaica
ENSODEG00000020349	-	100	54.861	ENSPTRG00000047058	-	100	54.861	Pan_troglodytes
ENSODEG00000020349	-	100	84.028	ENSPTRG00000016233	MRPS18C	100	84.028	Pan_troglodytes
ENSODEG00000020349	-	100	74.306	ENSPANG00000034202	-	100	74.306	Papio_anubis
ENSODEG00000020349	-	100	83.333	ENSPANG00000033931	MRPS18C	100	83.333	Papio_anubis
ENSODEG00000020349	-	100	77.083	ENSPEMG00000008390	Mrps18c	100	77.083	Peromyscus_maniculatus_bairdii
ENSODEG00000020349	-	99	71.127	ENSPCIG00000005376	-	100	71.127	Phascolarctos_cinereus
ENSODEG00000020349	-	78	71.681	ENSPCIG00000000097	-	80	71.681	Phascolarctos_cinereus
ENSODEG00000020349	-	71	86.275	ENSPCIG00000019737	-	100	86.275	Phascolarctos_cinereus
ENSODEG00000020349	-	100	84.722	ENSPPYG00000025867	MRPS18C	100	84.722	Pongo_abelii
ENSODEG00000020349	-	99	79.720	ENSPPYG00000025835	-	100	79.720	Pongo_abelii
ENSODEG00000020349	-	100	76.389	ENSPCAG00000004975	MRPS18C	100	76.389	Procavia_capensis
ENSODEG00000020349	-	100	80.556	ENSPCOG00000017634	MRPS18C	100	80.556	Propithecus_coquereli
ENSODEG00000020349	-	69	78.788	ENSPVAG00000006439	MRPS18C	100	78.788	Pteropus_vampyrus
ENSODEG00000020349	-	100	73.973	ENSRNOG00000002178	Mrps18c	100	73.973	Rattus_norvegicus
ENSODEG00000020349	-	100	73.611	ENSRBIG00000035023	-	100	73.611	Rhinopithecus_bieti
ENSODEG00000020349	-	100	83.333	ENSRBIG00000041685	MRPS18C	100	83.333	Rhinopithecus_bieti
ENSODEG00000020349	-	100	55.556	ENSRBIG00000031637	-	100	55.556	Rhinopithecus_bieti
ENSODEG00000020349	-	100	56.250	ENSRROG00000030722	-	100	56.250	Rhinopithecus_roxellana
ENSODEG00000020349	-	100	73.611	ENSRROG00000033834	-	100	73.611	Rhinopithecus_roxellana
ENSODEG00000020349	-	100	83.333	ENSRROG00000044334	MRPS18C	100	83.333	Rhinopithecus_roxellana
ENSODEG00000020349	-	100	63.194	ENSSBOG00000029234	-	100	63.194	Saimiri_boliviensis_boliviensis
ENSODEG00000020349	-	92	69.925	ENSSBOG00000032292	-	97	69.925	Saimiri_boliviensis_boliviensis
ENSODEG00000020349	-	99	73.427	ENSSBOG00000022205	-	92	73.427	Saimiri_boliviensis_boliviensis
ENSODEG00000020349	-	100	80.556	ENSSBOG00000027568	-	100	80.556	Saimiri_boliviensis_boliviensis
ENSODEG00000020349	-	76	86.364	ENSSHAG00000007084	MRPS18C	76	86.364	Sarcophilus_harrisii
ENSODEG00000020349	-	100	81.250	ENSSSCG00000038042	MRPS18C	100	81.250	Sus_scrofa
ENSODEG00000020349	-	100	80.556	ENSTBEG00000012505	MRPS18C	100	80.556	Tupaia_belangeri
ENSODEG00000020349	-	100	82.639	ENSTTRG00000004897	MRPS18C	100	82.639	Tursiops_truncatus
ENSODEG00000020349	-	100	85.417	ENSUAMG00000012878	MRPS18C	100	85.417	Ursus_americanus
ENSODEG00000020349	-	100	85.417	ENSUMAG00000008829	MRPS18C	100	85.417	Ursus_maritimus
ENSODEG00000020349	-	100	81.944	ENSVPAG00000011358	MRPS18C	100	81.944	Vicugna_pacos
ENSODEG00000020349	-	100	80.556	ENSVVUG00000015672	MRPS18C	100	80.556	Vulpes_vulpes