EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000020468 (Gene tree)
Gene ID: 101570727
Gene Symbol: -
Alias: -
Full Name: 60S ribosomal protein L13a pseudogene
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 612 bases
Position: chrJH651525.1:14820733-14821344
Accession: 101570727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000026963	Ribosomal_L13	PF00572.18	3.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000027533	-	612	-	ENSODEP00000026963	203 (aa)	-	UPI000333870E

Gene Model

Click here to download ENSODEG00000020468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000020468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000020468	-	100	99.507	ENSODEG00000016831	-	100	99.507
ENSODEG00000020468	-	100	98.522	ENSODEG00000019218	-	100	98.522
ENSODEG00000020468	-	100	99.015	ENSODEG00000020233	-	100	99.015

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000020468	-	100	97.537	ENSG00000142541	RPL13A	100	97.537	Homo_sapiens
ENSODEG00000020468	-	99	87.000	ENSAPOG00000014084	rpl13a	98	87.000	Acanthochromis_polyacanthus
ENSODEG00000020468	-	100	98.030	ENSAMEG00000014027	RPL13A	100	98.030	Ailuropoda_melanoleuca
ENSODEG00000020468	-	98	86.364	ENSACIG00000004871	rpl13a	99	86.364	Amphilophus_citrinellus
ENSODEG00000020468	-	99	87.000	ENSAOCG00000002123	rpl13a	98	87.000	Amphiprion_ocellaris
ENSODEG00000020468	-	99	87.000	ENSAPEG00000018777	rpl13a	98	87.000	Amphiprion_percula
ENSODEG00000020468	-	99	87.500	ENSATEG00000012828	rpl13a	98	87.500	Anabas_testudineus
ENSODEG00000020468	-	100	89.163	ENSACAG00000017279	RPL13A	100	89.163	Anolis_carolinensis
ENSODEG00000020468	-	100	97.044	ENSANAG00000030530	RPL13A	100	97.044	Aotus_nancymaae
ENSODEG00000020468	-	70	80.405	ENSANAG00000037443	-	100	80.405	Aotus_nancymaae
ENSODEG00000020468	-	70	95.070	ENSANAG00000013769	-	100	95.070	Aotus_nancymaae
ENSODEG00000020468	-	99	82.178	ENSANAG00000021423	-	100	82.178	Aotus_nancymaae
ENSODEG00000020468	-	100	85.294	ENSANAG00000020868	-	100	85.294	Aotus_nancymaae
ENSODEG00000020468	-	99	86.000	ENSACLG00000016552	rpl13a	98	86.000	Astatotilapia_calliptera
ENSODEG00000020468	-	98	86.432	ENSAMXG00000033532	rpl13a	97	86.432	Astyanax_mexicanus
ENSODEG00000020468	-	100	97.044	ENSBTAG00000005296	RPL13A	100	97.044	Bos_taurus
ENSODEG00000020468	-	98	52.525	WBGene00004428	rpl-16	98	52.525	Caenorhabditis_elegans
ENSODEG00000020468	-	100	95.074	ENSCJAG00000040678	-	100	95.074	Callithrix_jacchus
ENSODEG00000020468	-	100	97.537	ENSCJAG00000000072	-	100	97.537	Callithrix_jacchus
ENSODEG00000020468	-	100	90.148	ENSCJAG00000046649	-	100	90.148	Callithrix_jacchus
ENSODEG00000020468	-	82	80.233	ENSCJAG00000008837	-	98	80.233	Callithrix_jacchus
ENSODEG00000020468	-	100	98.030	ENSCAFG00000029892	RPL13A	100	98.030	Canis_familiaris
ENSODEG00000020468	-	99	61.500	ENSCAFG00000003946	-	97	61.500	Canis_familiaris
ENSODEG00000020468	-	100	98.030	ENSCAFG00020024917	-	100	98.030	Canis_lupus_dingo
ENSODEG00000020468	-	100	97.044	ENSCHIG00000021732	-	100	97.044	Capra_hircus
ENSODEG00000020468	-	100	93.596	ENSCHIG00000012581	-	100	93.596	Capra_hircus
ENSODEG00000020468	-	98	74.372	ENSTSYG00000028115	-	96	76.884	Carlito_syrichta
ENSODEG00000020468	-	100	97.537	ENSTSYG00000008791	-	100	97.537	Carlito_syrichta
ENSODEG00000020468	-	98	97.990	ENSCAPG00000007267	RPL13A	100	97.990	Cavia_aperea
ENSODEG00000020468	-	62	96.800	ENSCPOG00000023083	-	59	93.233	Cavia_porcellus
ENSODEG00000020468	-	100	98.522	ENSCPOG00000012417	RPL13A	100	98.522	Cavia_porcellus
ENSODEG00000020468	-	99	89.604	ENSCCAG00000034479	-	99	89.604	Cebus_capucinus
ENSODEG00000020468	-	68	90.647	ENSCCAG00000020555	-	100	90.647	Cebus_capucinus
ENSODEG00000020468	-	68	97.122	ENSCCAG00000029220	-	96	97.122	Cebus_capucinus
ENSODEG00000020468	-	100	97.537	ENSCCAG00000022898	RPL13A	100	97.537	Cebus_capucinus
ENSODEG00000020468	-	100	97.044	ENSCATG00000011576	RPL13A	100	97.044	Cercocebus_atys
ENSODEG00000020468	-	100	99.015	ENSCLAG00000012323	RPL13A	100	99.015	Chinchilla_lanigera
ENSODEG00000020468	-	100	95.567	ENSCSAG00000019054	-	100	95.567	Chlorocebus_sabaeus
ENSODEG00000020468	-	100	87.685	ENSCPBG00000014922	RPL13A	95	87.685	Chrysemys_picta_bellii
ENSODEG00000020468	-	99	63.366	ENSCING00000014892	-	98	63.366	Ciona_intestinalis
ENSODEG00000020468	-	99	65.025	ENSCSAVG00000000666	-	99	65.025	Ciona_savignyi
ENSODEG00000020468	-	100	96.059	ENSCANG00000000304	-	100	96.059	Colobus_angolensis_palliatus
ENSODEG00000020468	-	100	97.044	ENSCANG00000040885	-	100	97.044	Colobus_angolensis_palliatus
ENSODEG00000020468	-	81	83.133	ENSCANG00000018732	-	100	83.133	Colobus_angolensis_palliatus
ENSODEG00000020468	-	100	96.552	ENSCGRG00001018651	-	100	96.552	Cricetulus_griseus_chok1gshd
ENSODEG00000020468	-	100	96.552	ENSCGRG00000005890	-	100	96.552	Cricetulus_griseus_crigri
ENSODEG00000020468	-	99	77.723	ENSCSEG00000002640	rpl13a	98	77.723	Cynoglossus_semilaevis
ENSODEG00000020468	-	99	76.000	ENSCVAG00000011043	rpl13a	97	76.000	Cyprinodon_variegatus
ENSODEG00000020468	-	99	86.500	ENSDARG00000044093	rpl13a	98	86.500	Danio_rerio
ENSODEG00000020468	-	100	97.044	ENSDNOG00000035370	-	100	97.044	Dasypus_novemcinctus
ENSODEG00000020468	-	100	96.552	ENSDORG00000012194	-	100	96.552	Dipodomys_ordii
ENSODEG00000020468	-	99	57.500	FBgn0037351	RpL13A	98	57.500	Drosophila_melanogaster
ENSODEG00000020468	-	100	78.818	ENSETEG00000017076	-	100	78.818	Echinops_telfairi
ENSODEG00000020468	-	100	93.596	ENSETEG00000005732	-	100	93.596	Echinops_telfairi
ENSODEG00000020468	-	98	68.844	ENSEBUG00000007234	rpl13a	100	68.085	Eptatretus_burgeri
ENSODEG00000020468	-	98	96.970	ENSEASG00005005007	RPL13A	86	96.970	Equus_asinus_asinus
ENSODEG00000020468	-	100	97.044	ENSECAG00000015832	RPL13A	100	97.044	Equus_caballus
ENSODEG00000020468	-	74	96.026	ENSEEUG00000014071	RPL13A	74	96.026	Erinaceus_europaeus
ENSODEG00000020468	-	98	86.935	ENSELUG00000014577	rpl13a	97	86.935	Esox_lucius
ENSODEG00000020468	-	100	96.552	ENSFCAG00000009194	RPL13A	100	96.552	Felis_catus
ENSODEG00000020468	-	100	99.015	ENSFDAG00000016892	RPL13A	100	99.015	Fukomys_damarensis
ENSODEG00000020468	-	99	87.000	ENSFHEG00000004165	rpl13a	98	87.000	Fundulus_heteroclitus
ENSODEG00000020468	-	98	85.930	ENSGMOG00000010791	rpl13a	93	85.930	Gadus_morhua
ENSODEG00000020468	-	99	87.000	ENSGAFG00000007578	rpl13a	98	87.000	Gambusia_affinis
ENSODEG00000020468	-	99	86.500	ENSGACG00000009310	rpl13a	99	86.500	Gasterosteus_aculeatus
ENSODEG00000020468	-	94	81.771	ENSGAGG00000002437	RPL13A	74	81.771	Gopherus_agassizii
ENSODEG00000020468	-	67	93.382	ENSGGOG00000039904	-	72	93.382	Gorilla_gorilla
ENSODEG00000020468	-	68	91.367	ENSGGOG00000039250	-	84	91.367	Gorilla_gorilla
ENSODEG00000020468	-	100	95.567	ENSGGOG00000023324	-	100	95.567	Gorilla_gorilla
ENSODEG00000020468	-	100	97.537	ENSGGOG00000002932	RPL13A	100	97.537	Gorilla_gorilla
ENSODEG00000020468	-	99	86.000	ENSHBUG00000023575	rpl13a	98	86.000	Haplochromis_burtoni
ENSODEG00000020468	-	100	99.507	ENSHGLG00000010070	RPL13A	100	99.507	Heterocephalus_glaber_female
ENSODEG00000020468	-	100	99.507	ENSHGLG00100010359	RPL13A	100	99.507	Heterocephalus_glaber_male
ENSODEG00000020468	-	99	86.000	ENSHCOG00000007902	rpl13a	99	86.869	Hippocampus_comes
ENSODEG00000020468	-	98	85.930	ENSIPUG00000014098	rpl13a	94	85.930	Ictalurus_punctatus
ENSODEG00000020468	-	100	95.098	ENSSTOG00000021558	RPL13A	99	96.970	Ictidomys_tridecemlineatus
ENSODEG00000020468	-	100	98.030	ENSJJAG00000000343	-	100	98.030	Jaculus_jaculus
ENSODEG00000020468	-	99	85.500	ENSKMAG00000009039	rpl13a	98	85.500	Kryptolebias_marmoratus
ENSODEG00000020468	-	99	87.000	ENSLBEG00000005434	rpl13a	98	87.000	Labrus_bergylta
ENSODEG00000020468	-	97	82.915	ENSLACG00000019092	RPL13A	95	83.333	Latimeria_chalumnae
ENSODEG00000020468	-	99	87.500	ENSLOCG00000004388	rpl13a	98	87.500	Lepisosteus_oculatus
ENSODEG00000020468	-	100	96.552	ENSLAFG00000016213	RPL13A	100	96.552	Loxodonta_africana
ENSODEG00000020468	-	100	89.423	ENSMFAG00000002765	-	100	89.423	Macaca_fascicularis
ENSODEG00000020468	-	100	86.207	ENSMFAG00000003121	-	100	86.700	Macaca_fascicularis
ENSODEG00000020468	-	100	97.044	ENSMFAG00000001097	-	100	97.044	Macaca_fascicularis
ENSODEG00000020468	-	100	97.044	ENSMMUG00000007551	RPL13A	100	97.044	Macaca_mulatta
ENSODEG00000020468	-	100	89.423	ENSMMUG00000009018	-	100	89.423	Macaca_mulatta
ENSODEG00000020468	-	100	97.044	ENSMNEG00000034977	RPL13A	100	97.044	Macaca_nemestrina
ENSODEG00000020468	-	58	98.305	ENSMLEG00000038132	-	100	98.305	Mandrillus_leucophaeus
ENSODEG00000020468	-	99	86.500	ENSMAMG00000007425	rpl13a	84	86.500	Mastacembelus_armatus
ENSODEG00000020468	-	99	86.000	ENSMZEG00005004952	rpl13a	98	86.000	Maylandia_zebra
ENSODEG00000020468	-	100	83.744	ENSMAUG00000012558	-	100	83.744	Mesocricetus_auratus
ENSODEG00000020468	-	100	91.626	ENSMAUG00000020351	-	100	91.626	Mesocricetus_auratus
ENSODEG00000020468	-	100	96.552	ENSMAUG00000016402	-	100	96.552	Mesocricetus_auratus
ENSODEG00000020468	-	100	75.862	ENSMICG00000043457	-	100	75.862	Microcebus_murinus
ENSODEG00000020468	-	100	98.030	ENSMICG00000009318	-	100	98.030	Microcebus_murinus
ENSODEG00000020468	-	100	77.833	ENSMOCG00000016427	-	100	77.833	Microtus_ochrogaster
ENSODEG00000020468	-	100	96.059	ENSMOCG00000002774	-	100	96.059	Microtus_ochrogaster
ENSODEG00000020468	-	100	86.207	ENSMMOG00000010248	rpl13a	100	86.207	Mola_mola
ENSODEG00000020468	-	99	86.500	ENSMALG00000012804	rpl13a	98	86.500	Monopterus_albus
ENSODEG00000020468	-	100	96.059	MGP_CAROLIEiJ_G0029698	-	100	96.059	Mus_caroli
ENSODEG00000020468	-	100	96.552	ENSMUSG00000074129	Rpl13a	100	96.552	Mus_musculus
ENSODEG00000020468	-	100	96.059	MGP_PahariEiJ_G0012923	-	100	96.059	Mus_pahari
ENSODEG00000020468	-	100	93.596	MGP_SPRETEiJ_G0017763	-	100	93.596	Mus_spretus
ENSODEG00000020468	-	100	96.552	MGP_SPRETEiJ_G0030796	Rpl13a	100	96.552	Mus_spretus
ENSODEG00000020468	-	100	97.537	ENSMPUG00000002604	RPL13A	100	97.537	Mustela_putorius_furo
ENSODEG00000020468	-	98	97.487	ENSMLUG00000004945	RPL13A	98	97.487	Myotis_lucifugus
ENSODEG00000020468	-	100	98.030	ENSNGAG00000021984	-	100	98.030	Nannospalax_galili
ENSODEG00000020468	-	99	86.000	ENSNBRG00000024166	rpl13a	98	86.000	Neolamprologus_brichardi
ENSODEG00000020468	-	99	91.584	ENSNLEG00000012957	-	98	91.584	Nomascus_leucogenys
ENSODEG00000020468	-	100	93.103	ENSNLEG00000033213	-	100	93.103	Nomascus_leucogenys
ENSODEG00000020468	-	100	89.320	ENSNLEG00000005211	RPL13A	100	89.320	Nomascus_leucogenys
ENSODEG00000020468	-	85	82.081	ENSMEUG00000005199	RPL13A	100	82.081	Notamacropus_eugenii
ENSODEG00000020468	-	100	92.611	ENSOPRG00000001194	RPL13A	100	92.611	Ochotona_princeps
ENSODEG00000020468	-	99	85.500	ENSONIG00000003560	rpl13a	98	85.500	Oreochromis_niloticus
ENSODEG00000020468	-	100	93.103	ENSOANG00000000828	RPL13A	100	93.103	Ornithorhynchus_anatinus
ENSODEG00000020468	-	77	84.713	ENSOCUG00000026592	-	97	84.713	Oryctolagus_cuniculus
ENSODEG00000020468	-	99	85.500	ENSORLG00000014599	rpl13a	88	85.500	Oryzias_latipes
ENSODEG00000020468	-	99	85.500	ENSORLG00020013090	rpl13a	88	85.500	Oryzias_latipes_hni
ENSODEG00000020468	-	99	85.572	ENSORLG00015011634	rpl13a	98	85.572	Oryzias_latipes_hsok
ENSODEG00000020468	-	99	86.500	ENSOMEG00000010232	rpl13a	88	86.500	Oryzias_melastigma
ENSODEG00000020468	-	99	95.074	ENSOGAG00000030280	-	99	95.074	Otolemur_garnettii
ENSODEG00000020468	-	100	90.148	ENSOGAG00000026177	-	100	90.148	Otolemur_garnettii
ENSODEG00000020468	-	100	97.537	ENSOGAG00000004625	-	100	97.537	Otolemur_garnettii
ENSODEG00000020468	-	97	78.571	ENSOARG00000017798	-	96	78.571	Ovis_aries
ENSODEG00000020468	-	100	95.567	ENSOARG00000020159	-	100	95.567	Ovis_aries
ENSODEG00000020468	-	99	96.517	ENSOARG00000013169	-	99	96.517	Ovis_aries
ENSODEG00000020468	-	100	97.537	ENSPPAG00000037365	RPL13A	100	97.537	Pan_paniscus
ENSODEG00000020468	-	100	93.103	ENSPPAG00000019107	-	100	93.103	Pan_paniscus
ENSODEG00000020468	-	67	93.382	ENSPPAG00000006023	-	71	93.382	Pan_paniscus
ENSODEG00000020468	-	100	95.074	ENSPPAG00000023659	-	100	95.074	Pan_paniscus
ENSODEG00000020468	-	100	96.552	ENSPPRG00000011265	RPL13A	100	96.552	Panthera_pardus
ENSODEG00000020468	-	100	96.059	ENSPTRG00000050666	-	100	96.059	Pan_troglodytes
ENSODEG00000020468	-	70	96.479	ENSPTRG00000042978	-	100	96.479	Pan_troglodytes
ENSODEG00000020468	-	67	98.519	ENSPTRG00000052284	-	92	98.519	Pan_troglodytes
ENSODEG00000020468	-	100	93.103	ENSPTRG00000049426	-	100	93.103	Pan_troglodytes
ENSODEG00000020468	-	100	97.537	ENSPTRG00000011298	RPL13A	100	97.537	Pan_troglodytes
ENSODEG00000020468	-	100	97.044	ENSPANG00000012050	RPL13A	100	97.044	Papio_anubis
ENSODEG00000020468	-	99	86.000	ENSPKIG00000000720	rpl13a	98	86.000	Paramormyrops_kingsleyae
ENSODEG00000020468	-	98	88.945	ENSPSIG00000018234	RPL13A	100	88.945	Pelodiscus_sinensis
ENSODEG00000020468	-	98	87.437	ENSPMGG00000010552	rpl13a	96	87.437	Periophthalmus_magnuspinnatus
ENSODEG00000020468	-	100	97.044	ENSPEMG00000009221	-	100	97.044	Peromyscus_maniculatus_bairdii
ENSODEG00000020468	-	98	85.930	ENSPMAG00000006362	rpl13a	97	85.930	Petromyzon_marinus
ENSODEG00000020468	-	100	93.103	ENSPCIG00000007340	-	100	93.103	Phascolarctos_cinereus
ENSODEG00000020468	-	83	74.556	ENSPCIG00000014063	-	90	74.556	Phascolarctos_cinereus
ENSODEG00000020468	-	99	86.000	ENSPFOG00000013546	rpl13a	98	86.000	Poecilia_formosa
ENSODEG00000020468	-	99	86.000	ENSPLAG00000016066	rpl13a	98	86.000	Poecilia_latipinna
ENSODEG00000020468	-	99	86.000	ENSPMEG00000018384	rpl13a	98	86.000	Poecilia_mexicana
ENSODEG00000020468	-	99	86.000	ENSPREG00000020079	rpl13a	98	86.000	Poecilia_reticulata
ENSODEG00000020468	-	100	97.537	ENSPPYG00000010251	-	100	97.537	Pongo_abelii
ENSODEG00000020468	-	100	97.537	ENSPPYG00000006798	-	100	97.537	Pongo_abelii
ENSODEG00000020468	-	100	96.552	ENSPCAG00000004086	RPL13A	100	96.552	Procavia_capensis
ENSODEG00000020468	-	98	78.818	ENSPCOG00000016293	-	98	78.818	Propithecus_coquereli
ENSODEG00000020468	-	100	98.030	ENSPCOG00000023898	RPL13A	100	98.030	Propithecus_coquereli
ENSODEG00000020468	-	100	97.044	ENSPVAG00000010958	RPL13A	100	97.044	Pteropus_vampyrus
ENSODEG00000020468	-	99	86.000	ENSPNYG00000019779	rpl13a	98	86.000	Pundamilia_nyererei
ENSODEG00000020468	-	98	86.869	ENSPNAG00000026887	rpl13a	97	86.869	Pygocentrus_nattereri
ENSODEG00000020468	-	100	96.552	ENSRNOG00000062298	Rpl13a	100	96.552	Rattus_norvegicus
ENSODEG00000020468	-	100	96.552	ENSRBIG00000044737	RPL13A	99	96.552	Rhinopithecus_bieti
ENSODEG00000020468	-	67	88.971	ENSRROG00000028369	-	68	88.971	Rhinopithecus_roxellana
ENSODEG00000020468	-	100	97.044	ENSRROG00000042976	-	100	97.044	Rhinopithecus_roxellana
ENSODEG00000020468	-	100	90.148	ENSRROG00000036041	-	100	90.148	Rhinopithecus_roxellana
ENSODEG00000020468	-	92	56.771	YNL069C	RPL16B	97	57.292	Saccharomyces_cerevisiae
ENSODEG00000020468	-	94	57.949	YIL133C	RPL16A	98	57.949	Saccharomyces_cerevisiae
ENSODEG00000020468	-	100	96.552	ENSSBOG00000028481	RPL13A	100	96.552	Saimiri_boliviensis_boliviensis
ENSODEG00000020468	-	100	79.091	ENSSBOG00000024635	-	100	79.091	Saimiri_boliviensis_boliviensis
ENSODEG00000020468	-	98	84.422	ENSSFOG00015001972	rpl13a	98	84.000	Scleropages_formosus
ENSODEG00000020468	-	99	86.500	ENSSDUG00000017181	rpl13a	100	86.935	Seriola_dumerili
ENSODEG00000020468	-	82	60.843	ENSSLDG00000007920	-	85	61.310	Seriola_lalandi_dorsalis
ENSODEG00000020468	-	99	86.500	ENSSLDG00000002561	rpl13a	98	86.500	Seriola_lalandi_dorsalis
ENSODEG00000020468	-	53	73.394	ENSSPUG00000014548	RPL13A	86	73.394	Sphenodon_punctatus
ENSODEG00000020468	-	95	73.438	ENSSSCG00000031204	-	92	78.488	Sus_scrofa
ENSODEG00000020468	-	100	97.059	ENSSSCG00000034448	-	100	97.059	Sus_scrofa
ENSODEG00000020468	-	99	86.500	ENSTRUG00000023611	rpl13a	98	86.500	Takifugu_rubripes
ENSODEG00000020468	-	100	97.044	ENSTTRG00000005485	RPL13A	100	97.044	Tursiops_truncatus
ENSODEG00000020468	-	100	98.030	ENSUAMG00000008438	RPL13A	100	98.030	Ursus_americanus
ENSODEG00000020468	-	100	98.030	ENSUMAG00000002385	RPL13A	100	98.030	Ursus_maritimus
ENSODEG00000020468	-	98	94.949	ENSVPAG00000006564	RPL13A	100	94.949	Vicugna_pacos
ENSODEG00000020468	-	100	98.030	ENSVVUG00000022597	RPL13A	100	98.030	Vulpes_vulpes
ENSODEG00000020468	-	98	91.457	ENSXETG00000014144	rpl13a	86	91.457	Xenopus_tropicalis
ENSODEG00000020468	-	99	87.000	ENSXCOG00000004826	rpl13a	98	87.000	Xiphophorus_couchianus
ENSODEG00000020468	-	99	87.000	ENSXMAG00000027604	rpl13a	98	87.000	Xiphophorus_maculatus