EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000000170 (Gene tree)
Gene ID: 100950599
Gene Symbol: XRN1
Alias: -
Full Name: 5'-3' exoribonuclease 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 132509 bases
Position: chrGL873551.1:11875327-12007835
Accession: 30654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000000151	XRN_N	PF03159.18	4.5e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000000170	XRN1-201	5240	-	ENSOGAP00000000151	1706 (aa)	-	H0WFW2

Gene Model

Click here to download ENSOGAG00000000170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000000170's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000000170	XRN1	100	90.978	ENSG00000114127	XRN1	100	99.394	Homo_sapiens
ENSOGAG00000000170	XRN1	95	70.512	ENSAPOG00000000622	xrn1	99	70.603	Acanthochromis_polyacanthus
ENSOGAG00000000170	XRN1	100	88.050	ENSAMEG00000012538	XRN1	100	88.050	Ailuropoda_melanoleuca
ENSOGAG00000000170	XRN1	95	70.455	ENSACIG00000001057	xrn1	98	70.488	Amphilophus_citrinellus
ENSOGAG00000000170	XRN1	100	59.014	ENSAOCG00000014097	xrn1	97	59.604	Amphiprion_ocellaris
ENSOGAG00000000170	XRN1	100	59.035	ENSAPEG00000006620	xrn1	91	70.064	Amphiprion_percula
ENSOGAG00000000170	XRN1	95	67.339	ENSATEG00000009752	xrn1	100	67.312	Anabas_testudineus
ENSOGAG00000000170	XRN1	99	73.545	ENSAPLG00000004905	XRN1	100	73.387	Anas_platyrhynchos
ENSOGAG00000000170	XRN1	100	70.112	ENSACAG00000004985	XRN1	100	70.056	Anolis_carolinensis
ENSOGAG00000000170	XRN1	100	91.042	ENSANAG00000029013	XRN1	99	92.851	Aotus_nancymaae
ENSOGAG00000000170	XRN1	100	58.890	ENSACLG00000004806	xrn1	97	59.627	Astatotilapia_calliptera
ENSOGAG00000000170	XRN1	99	58.739	ENSAMXG00000019370	xrn1	95	94.175	Astyanax_mexicanus
ENSOGAG00000000170	XRN1	100	89.690	ENSBTAG00000011524	XRN1	100	89.690	Bos_taurus
ENSOGAG00000000170	XRN1	71	37.850	WBGene00012730	xrn-1	81	36.822	Caenorhabditis_elegans
ENSOGAG00000000170	XRN1	100	91.213	ENSCJAG00000001872	XRN1	100	91.095	Callithrix_jacchus
ENSOGAG00000000170	XRN1	100	90.217	ENSCAFG00000007783	XRN1	100	90.158	Canis_familiaris
ENSOGAG00000000170	XRN1	100	88.424	ENSCAFG00020009120	XRN1	99	93.714	Canis_lupus_dingo
ENSOGAG00000000170	XRN1	99	86.854	ENSCHIG00000019192	XRN1	99	86.854	Capra_hircus
ENSOGAG00000000170	XRN1	100	90.340	ENSTSYG00000002705	XRN1	100	90.164	Carlito_syrichta
ENSOGAG00000000170	XRN1	55	71.476	ENSCAPG00000004604	-	99	71.476	Cavia_aperea
ENSOGAG00000000170	XRN1	100	91.569	ENSCCAG00000034800	XRN1	100	91.452	Cebus_capucinus
ENSOGAG00000000170	XRN1	100	91.276	ENSCATG00000041794	XRN1	100	91.276	Cercocebus_atys
ENSOGAG00000000170	XRN1	100	83.792	ENSCLAG00000001451	XRN1	99	90.808	Chinchilla_lanigera
ENSOGAG00000000170	XRN1	100	91.393	ENSCSAG00000011265	XRN1	100	91.393	Chlorocebus_sabaeus
ENSOGAG00000000170	XRN1	61	98.701	ENSCHOG00000013961	-	62	98.701	Choloepus_hoffmanni
ENSOGAG00000000170	XRN1	70	43.604	ENSCSAVG00000008584	-	98	43.258	Ciona_savignyi
ENSOGAG00000000170	XRN1	100	91.506	ENSCANG00000037495	XRN1	99	93.429	Colobus_angolensis_palliatus
ENSOGAG00000000170	XRN1	100	84.404	ENSCGRG00001019411	Xrn1	99	90.808	Cricetulus_griseus_chok1gshd
ENSOGAG00000000170	XRN1	100	84.404	ENSCGRG00000012464	Xrn1	99	90.808	Cricetulus_griseus_crigri
ENSOGAG00000000170	XRN1	100	54.157	ENSCSEG00000021285	xrn1	94	95.192	Cynoglossus_semilaevis
ENSOGAG00000000170	XRN1	66	66.696	ENSCVAG00000013089	xrn1	99	70.070	Cyprinodon_variegatus
ENSOGAG00000000170	XRN1	99	60.502	ENSDARG00000091652	xrn1	98	74.051	Danio_rerio
ENSOGAG00000000170	XRN1	100	83.956	ENSDORG00000013833	Xrn1	100	83.956	Dipodomys_ordii
ENSOGAG00000000170	XRN1	70	40.329	FBgn0020261	pcm	72	39.902	Drosophila_melanogaster
ENSOGAG00000000170	XRN1	86	99.099	ENSETEG00000003978	XRN1	88	98.387	Echinops_telfairi
ENSOGAG00000000170	XRN1	100	89.520	ENSEASG00005002687	XRN1	99	92.571	Equus_asinus_asinus
ENSOGAG00000000170	XRN1	100	89.520	ENSECAG00000008301	XRN1	100	89.520	Equus_caballus
ENSOGAG00000000170	XRN1	92	79.863	ENSEEUG00000011323	XRN1	92	79.863	Erinaceus_europaeus
ENSOGAG00000000170	XRN1	100	59.502	ENSELUG00000000169	xrn1	100	59.109	Esox_lucius
ENSOGAG00000000170	XRN1	100	86.366	ENSFCAG00000027589	XRN1	99	96.923	Felis_catus
ENSOGAG00000000170	XRN1	100	72.241	ENSFALG00000007021	XRN1	100	71.619	Ficedula_albicollis
ENSOGAG00000000170	XRN1	100	85.452	ENSFDAG00000020494	XRN1	99	90.650	Fukomys_damarensis
ENSOGAG00000000170	XRN1	84	66.583	ENSGMOG00000006396	xrn1	83	66.109	Gadus_morhua
ENSOGAG00000000170	XRN1	100	72.697	ENSGALG00000002706	XRN1	100	72.641	Gallus_gallus
ENSOGAG00000000170	XRN1	100	57.425	ENSGACG00000014328	xrn1	96	58.882	Gasterosteus_aculeatus
ENSOGAG00000000170	XRN1	95	75.419	ENSGAGG00000017535	XRN1	99	75.359	Gopherus_agassizii
ENSOGAG00000000170	XRN1	100	91.218	ENSGGOG00000008047	XRN1	100	91.042	Gorilla_gorilla
ENSOGAG00000000170	XRN1	100	59.172	ENSHBUG00000005908	xrn1	98	66.324	Haplochromis_burtoni
ENSOGAG00000000170	XRN1	100	86.262	ENSHGLG00000014476	XRN1	99	91.143	Heterocephalus_glaber_female
ENSOGAG00000000170	XRN1	100	86.262	ENSHGLG00100015130	XRN1	99	91.143	Heterocephalus_glaber_male
ENSOGAG00000000170	XRN1	96	69.175	ENSHCOG00000014062	xrn1	99	69.082	Hippocampus_comes
ENSOGAG00000000170	XRN1	99	60.023	ENSIPUG00000015229	xrn1	99	60.592	Ictalurus_punctatus
ENSOGAG00000000170	XRN1	100	88.080	ENSSTOG00000013552	XRN1	99	92.857	Ictidomys_tridecemlineatus
ENSOGAG00000000170	XRN1	98	83.730	ENSJJAG00000010863	Xrn1	99	93.413	Jaculus_jaculus
ENSOGAG00000000170	XRN1	100	58.001	ENSKMAG00000021356	xrn1	94	68.894	Kryptolebias_marmoratus
ENSOGAG00000000170	XRN1	100	57.649	ENSLBEG00000018656	xrn1	97	96.117	Labrus_bergylta
ENSOGAG00000000170	XRN1	100	67.158	ENSLACG00000009020	XRN1	100	67.101	Latimeria_chalumnae
ENSOGAG00000000170	XRN1	100	63.809	ENSLOCG00000007944	xrn1	100	63.809	Lepisosteus_oculatus
ENSOGAG00000000170	XRN1	63	92.797	ENSLAFG00000015426	XRN1	100	92.797	Loxodonta_africana
ENSOGAG00000000170	XRN1	100	91.393	ENSMFAG00000032599	XRN1	100	91.393	Macaca_fascicularis
ENSOGAG00000000170	XRN1	100	91.335	ENSMMUG00000014038	XRN1	100	91.335	Macaca_mulatta
ENSOGAG00000000170	XRN1	100	91.218	ENSMNEG00000034217	XRN1	100	91.218	Macaca_nemestrina
ENSOGAG00000000170	XRN1	93	69.140	ENSMAMG00000013219	xrn1	96	69.376	Mastacembelus_armatus
ENSOGAG00000000170	XRN1	100	58.630	ENSMZEG00005015099	xrn1	97	59.534	Maylandia_zebra
ENSOGAG00000000170	XRN1	99	72.591	ENSMGAG00000006333	XRN1	100	72.491	Meleagris_gallopavo
ENSOGAG00000000170	XRN1	100	92.924	ENSMICG00000048948	XRN1	96	100.000	Microcebus_murinus
ENSOGAG00000000170	XRN1	58	89.382	ENSMOCG00000008665	Xrn1	99	89.382	Microtus_ochrogaster
ENSOGAG00000000170	XRN1	100	80.082	ENSMODG00000021236	XRN1	100	80.023	Monodelphis_domestica
ENSOGAG00000000170	XRN1	100	56.821	ENSMALG00000004098	xrn1	100	56.674	Monopterus_albus
ENSOGAG00000000170	XRN1	96	89.889	MGP_CAROLIEiJ_G0032535	Xrn1	100	100.000	Mus_caroli
ENSOGAG00000000170	XRN1	100	83.142	ENSMUSG00000032410	Xrn1	100	100.000	Mus_musculus
ENSOGAG00000000170	XRN1	100	83.429	MGP_PahariEiJ_G0015404	Xrn1	100	100.000	Mus_pahari
ENSOGAG00000000170	XRN1	100	83.200	MGP_SPRETEiJ_G0033678	Xrn1	100	100.000	Mus_spretus
ENSOGAG00000000170	XRN1	100	90.398	ENSMPUG00000012040	XRN1	100	90.398	Mustela_putorius_furo
ENSOGAG00000000170	XRN1	100	85.444	ENSMLUG00000016885	XRN1	100	85.444	Myotis_lucifugus
ENSOGAG00000000170	XRN1	58	89.714	ENSNGAG00000023964	Xrn1	99	89.714	Nannospalax_galili
ENSOGAG00000000170	XRN1	100	91.564	ENSNLEG00000004726	XRN1	100	91.564	Nomascus_leucogenys
ENSOGAG00000000170	XRN1	76	98.969	ENSMEUG00000014473	-	77	99.029	Notamacropus_eugenii
ENSOGAG00000000170	XRN1	79	84.320	ENSOPRG00000007337	-	78	84.320	Ochotona_princeps
ENSOGAG00000000170	XRN1	100	59.476	ENSONIG00000016673	xrn1	99	62.839	Oreochromis_niloticus
ENSOGAG00000000170	XRN1	92	75.095	ENSOANG00000006735	XRN1	100	75.032	Ornithorhynchus_anatinus
ENSOGAG00000000170	XRN1	100	88.131	ENSOCUG00000001861	XRN1	100	88.131	Oryctolagus_cuniculus
ENSOGAG00000000170	XRN1	100	59.201	ENSORLG00000013005	xrn1	100	58.609	Oryzias_latipes
ENSOGAG00000000170	XRN1	100	59.088	ENSORLG00020005559	xrn1	100	59.322	Oryzias_latipes_hni
ENSOGAG00000000170	XRN1	100	58.807	ENSORLG00015022523	xrn1	100	59.209	Oryzias_latipes_hsok
ENSOGAG00000000170	XRN1	92	70.660	ENSOMEG00000015397	xrn1	99	70.579	Oryzias_melastigma
ENSOGAG00000000170	XRN1	99	89.971	ENSOARG00000006343	XRN1	99	89.971	Ovis_aries
ENSOGAG00000000170	XRN1	100	91.042	ENSPPAG00000010180	XRN1	100	90.867	Pan_paniscus
ENSOGAG00000000170	XRN1	100	89.936	ENSPPRG00000007125	XRN1	100	89.936	Panthera_pardus
ENSOGAG00000000170	XRN1	100	89.936	ENSPTIG00000021081	XRN1	100	89.936	Panthera_tigris_altaica
ENSOGAG00000000170	XRN1	100	90.984	ENSPTRG00000015482	XRN1	100	90.808	Pan_troglodytes
ENSOGAG00000000170	XRN1	100	91.393	ENSPANG00000010638	XRN1	100	91.218	Papio_anubis
ENSOGAG00000000170	XRN1	100	74.773	ENSPSIG00000018050	XRN1	100	74.645	Pelodiscus_sinensis
ENSOGAG00000000170	XRN1	57	73.155	ENSPMGG00000002648	xrn1	98	73.460	Periophthalmus_magnuspinnatus
ENSOGAG00000000170	XRN1	58	90.333	ENSPEMG00000020610	Xrn1	99	90.333	Peromyscus_maniculatus_bairdii
ENSOGAG00000000170	XRN1	65	48.820	ENSPMAG00000002975	xrn1	91	78.448	Petromyzon_marinus
ENSOGAG00000000170	XRN1	100	79.825	ENSPCIG00000028735	XRN1	99	87.014	Phascolarctos_cinereus
ENSOGAG00000000170	XRN1	90	62.925	ENSPFOG00000013932	xrn1	99	63.165	Poecilia_formosa
ENSOGAG00000000170	XRN1	90	62.047	ENSPLAG00000021653	xrn1	99	62.683	Poecilia_latipinna
ENSOGAG00000000170	XRN1	88	62.987	ENSPMEG00000003076	xrn1	95	63.312	Poecilia_mexicana
ENSOGAG00000000170	XRN1	100	59.266	ENSPREG00000021147	xrn1	100	59.864	Poecilia_reticulata
ENSOGAG00000000170	XRN1	100	91.330	ENSPPYG00000014172	XRN1	100	91.213	Pongo_abelii
ENSOGAG00000000170	XRN1	90	79.974	ENSPCAG00000005638	XRN1	99	80.000	Procavia_capensis
ENSOGAG00000000170	XRN1	100	93.322	ENSPCOG00000013089	XRN1	99	95.882	Propithecus_coquereli
ENSOGAG00000000170	XRN1	96	89.168	ENSPVAG00000016265	XRN1	96	89.168	Pteropus_vampyrus
ENSOGAG00000000170	XRN1	100	59.255	ENSPNYG00000010570	xrn1	97	59.917	Pundamilia_nyererei
ENSOGAG00000000170	XRN1	99	58.692	ENSPNAG00000023531	xrn1	99	58.477	Pygocentrus_nattereri
ENSOGAG00000000170	XRN1	100	83.773	ENSRNOG00000042951	Xrn1	100	83.773	Rattus_norvegicus
ENSOGAG00000000170	XRN1	100	90.867	ENSRBIG00000041227	XRN1	100	90.867	Rhinopithecus_bieti
ENSOGAG00000000170	XRN1	69	32.968	YGL173C	XRN1	74	54.496	Saccharomyces_cerevisiae
ENSOGAG00000000170	XRN1	100	91.213	ENSSBOG00000029561	XRN1	100	91.095	Saimiri_boliviensis_boliviensis
ENSOGAG00000000170	XRN1	99	79.172	ENSSHAG00000016207	XRN1	100	79.112	Sarcophilus_harrisii
ENSOGAG00000000170	XRN1	100	59.414	ENSSFOG00015024211	xrn1	96	61.141	Scleropages_formosus
ENSOGAG00000000170	XRN1	100	64.826	ENSSMAG00000016534	xrn1	99	64.826	Scophthalmus_maximus
ENSOGAG00000000170	XRN1	91	70.033	ENSSDUG00000010306	xrn1	97	70.033	Seriola_dumerili
ENSOGAG00000000170	XRN1	95	68.405	ENSSLDG00000021543	xrn1	100	68.458	Seriola_lalandi_dorsalis
ENSOGAG00000000170	XRN1	67	81.405	ENSSARG00000007741	-	83	81.405	Sorex_araneus
ENSOGAG00000000170	XRN1	100	74.927	ENSTGUG00000008498	XRN1	100	74.594	Taeniopygia_guttata
ENSOGAG00000000170	XRN1	100	56.037	ENSTRUG00000004895	xrn1	96	71.339	Takifugu_rubripes
ENSOGAG00000000170	XRN1	100	56.509	ENSTNIG00000017615	xrn1	100	56.838	Tetraodon_nigroviridis
ENSOGAG00000000170	XRN1	84	97.574	ENSTBEG00000003256	XRN1	84	97.574	Tupaia_belangeri
ENSOGAG00000000170	XRN1	100	86.460	ENSTTRG00000012914	XRN1	100	86.460	Tursiops_truncatus
ENSOGAG00000000170	XRN1	100	89.233	ENSUAMG00000001608	XRN1	99	93.714	Ursus_americanus
ENSOGAG00000000170	XRN1	100	91.106	ENSUMAG00000013625	XRN1	100	91.106	Ursus_maritimus
ENSOGAG00000000170	XRN1	100	87.698	ENSVPAG00000004690	XRN1	100	87.698	Vicugna_pacos
ENSOGAG00000000170	XRN1	100	91.159	ENSVVUG00000024461	XRN1	99	94.041	Vulpes_vulpes
ENSOGAG00000000170	XRN1	100	67.751	ENSXETG00000000619	xrn1	97	88.978	Xenopus_tropicalis
ENSOGAG00000000170	XRN1	100	59.114	ENSXCOG00000007917	xrn1	100	59.528	Xiphophorus_couchianus
ENSOGAG00000000170	XRN1	92	69.927	ENSXMAG00000018320	xrn1	98	69.927	Xiphophorus_maculatus