EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000000315 (Gene tree)
Gene ID: 100944160
Gene Symbol: CPSF1
Alias: -
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 17139 bases
Position: chrGL873764.1:460515-477653
Accession: 100944160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000000282	CPSF_A	PF03178.15	2e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000000316	CPSF1-201	4341	XM_023508346	ENSOGAP00000000282	1442 (aa)	XP_023364114	H0WG63

Gene Model

Click here to download ENSOGAG00000000315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000000315's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000000315	CPSF1	100	97.436	ENSG00000071894	CPSF1	100	97.436	Homo_sapiens
ENSOGAG00000000315	CPSF1	100	78.108	ENSAPOG00000019621	cpsf1	100	78.378	Acanthochromis_polyacanthus
ENSOGAG00000000315	CPSF1	97	95.412	ENSAMEG00000005557	CPSF1	99	95.412	Ailuropoda_melanoleuca
ENSOGAG00000000315	CPSF1	100	78.270	ENSACIG00000006112	cpsf1	100	78.478	Amphilophus_citrinellus
ENSOGAG00000000315	CPSF1	100	79.545	ENSAOCG00000007120	cpsf1	100	79.752	Amphiprion_ocellaris
ENSOGAG00000000315	CPSF1	100	79.876	ENSAPEG00000005755	cpsf1	100	80.179	Amphiprion_percula
ENSOGAG00000000315	CPSF1	100	77.950	ENSATEG00000011097	cpsf1	100	78.220	Anabas_testudineus
ENSOGAG00000000315	CPSF1	93	81.696	ENSACAG00000009655	CPSF1	100	81.696	Anolis_carolinensis
ENSOGAG00000000315	CPSF1	100	97.573	ENSANAG00000036514	CPSF1	100	97.573	Aotus_nancymaae
ENSOGAG00000000315	CPSF1	100	77.509	ENSACLG00000012231	cpsf1	99	79.099	Astatotilapia_calliptera
ENSOGAG00000000315	CPSF1	100	74.153	ENSAMXG00000008485	cpsf1	100	74.223	Astyanax_mexicanus
ENSOGAG00000000315	CPSF1	100	94.966	ENSBTAG00000008355	CPSF1	100	95.320	Bos_taurus
ENSOGAG00000000315	CPSF1	100	32.129	WBGene00022301	cpsf-1	100	40.169	Caenorhabditis_elegans
ENSOGAG00000000315	CPSF1	100	97.503	ENSCJAG00000021421	CPSF1	100	97.503	Callithrix_jacchus
ENSOGAG00000000315	CPSF1	96	96.987	ENSCAFG00000001600	CPSF1	100	97.022	Canis_familiaris
ENSOGAG00000000315	CPSF1	100	96.817	ENSCAFG00020020821	CPSF1	100	96.817	Canis_lupus_dingo
ENSOGAG00000000315	CPSF1	100	91.407	ENSCHIG00000015833	CPSF1	100	91.407	Capra_hircus
ENSOGAG00000000315	CPSF1	100	98.128	ENSTSYG00000028560	CPSF1	100	98.128	Carlito_syrichta
ENSOGAG00000000315	CPSF1	97	95.771	ENSCAPG00000014921	CPSF1	99	95.771	Cavia_aperea
ENSOGAG00000000315	CPSF1	100	95.357	ENSCPOG00000011448	CPSF1	100	95.357	Cavia_porcellus
ENSOGAG00000000315	CPSF1	100	97.781	ENSCCAG00000037658	CPSF1	100	97.781	Cebus_capucinus
ENSOGAG00000000315	CPSF1	100	97.434	ENSCATG00000037234	CPSF1	100	97.434	Cercocebus_atys
ENSOGAG00000000315	CPSF1	100	97.295	ENSCLAG00000012166	CPSF1	100	97.295	Chinchilla_lanigera
ENSOGAG00000000315	CPSF1	100	97.434	ENSCSAG00000008502	CPSF1	100	97.434	Chlorocebus_sabaeus
ENSOGAG00000000315	CPSF1	99	87.754	ENSCPBG00000018910	CPSF1	96	87.754	Chrysemys_picta_bellii
ENSOGAG00000000315	CPSF1	96	48.709	ENSCING00000000514	-	100	48.637	Ciona_intestinalis
ENSOGAG00000000315	CPSF1	99	47.734	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSOGAG00000000315	CPSF1	99	91.882	ENSCANG00000032760	CPSF1	99	91.882	Colobus_angolensis_palliatus
ENSOGAG00000000315	CPSF1	100	96.879	ENSCGRG00001016344	Cpsf1	100	96.879	Cricetulus_griseus_chok1gshd
ENSOGAG00000000315	CPSF1	100	94.868	ENSCGRG00000003118	Cpsf1	100	94.868	Cricetulus_griseus_crigri
ENSOGAG00000000315	CPSF1	100	77.632	ENSCSEG00000013464	cpsf1	100	77.770	Cynoglossus_semilaevis
ENSOGAG00000000315	CPSF1	85	77.153	ENSCVAG00000014059	cpsf1	100	75.463	Cyprinodon_variegatus
ENSOGAG00000000315	CPSF1	100	79.752	ENSDARG00000034178	cpsf1	100	79.821	Danio_rerio
ENSOGAG00000000315	CPSF1	68	97.391	ENSDNOG00000043654	CPSF1	94	97.391	Dasypus_novemcinctus
ENSOGAG00000000315	CPSF1	97	96.559	ENSDORG00000006278	Cpsf1	99	96.559	Dipodomys_ordii
ENSOGAG00000000315	CPSF1	100	45.503	FBgn0024698	Cpsf160	100	45.363	Drosophila_melanogaster
ENSOGAG00000000315	CPSF1	80	98.658	ENSETEG00000006022	CPSF1	83	98.658	Echinops_telfairi
ENSOGAG00000000315	CPSF1	100	97.163	ENSEASG00005010774	CPSF1	100	97.163	Equus_asinus_asinus
ENSOGAG00000000315	CPSF1	100	97.163	ENSECAG00000022209	CPSF1	100	97.163	Equus_caballus
ENSOGAG00000000315	CPSF1	100	94.810	ENSEEUG00000000471	CPSF1	100	94.810	Erinaceus_europaeus
ENSOGAG00000000315	CPSF1	100	78.767	ENSELUG00000012271	cpsf1	100	79.041	Esox_lucius
ENSOGAG00000000315	CPSF1	100	97.087	ENSFDAG00000016060	CPSF1	100	97.087	Fukomys_damarensis
ENSOGAG00000000315	CPSF1	100	77.204	ENSFHEG00000016801	cpsf1	100	77.273	Fundulus_heteroclitus
ENSOGAG00000000315	CPSF1	100	78.222	ENSGMOG00000000796	cpsf1	100	78.498	Gadus_morhua
ENSOGAG00000000315	CPSF1	95	83.929	ENSGAFG00000018890	cpsf1	100	83.929	Gambusia_affinis
ENSOGAG00000000315	CPSF1	100	78.748	ENSGACG00000008703	cpsf1	100	78.817	Gasterosteus_aculeatus
ENSOGAG00000000315	CPSF1	100	83.909	ENSGAGG00000004276	CPSF1	98	87.836	Gopherus_agassizii
ENSOGAG00000000315	CPSF1	100	97.503	ENSGGOG00000016185	CPSF1	100	97.503	Gorilla_gorilla
ENSOGAG00000000315	CPSF1	100	79.792	ENSHBUG00000018900	cpsf1	100	79.931	Haplochromis_burtoni
ENSOGAG00000000315	CPSF1	100	97.018	ENSHGLG00000016139	CPSF1	100	97.018	Heterocephalus_glaber_female
ENSOGAG00000000315	CPSF1	100	96.949	ENSHGLG00100009750	CPSF1	100	96.949	Heterocephalus_glaber_male
ENSOGAG00000000315	CPSF1	100	77.153	ENSHCOG00000018509	cpsf1	100	77.069	Hippocampus_comes
ENSOGAG00000000315	CPSF1	100	76.770	ENSIPUG00000011259	cpsf1	100	76.770	Ictalurus_punctatus
ENSOGAG00000000315	CPSF1	97	96.857	ENSSTOG00000009957	CPSF1	99	96.857	Ictidomys_tridecemlineatus
ENSOGAG00000000315	CPSF1	100	96.533	ENSJJAG00000023002	Cpsf1	100	96.533	Jaculus_jaculus
ENSOGAG00000000315	CPSF1	91	85.580	ENSKMAG00000001940	cpsf1	99	85.580	Kryptolebias_marmoratus
ENSOGAG00000000315	CPSF1	100	77.454	ENSLBEG00000003601	cpsf1	100	77.943	Labrus_bergylta
ENSOGAG00000000315	CPSF1	88	81.611	ENSLACG00000000233	CPSF1	92	81.611	Latimeria_chalumnae
ENSOGAG00000000315	CPSF1	100	78.537	ENSLOCG00000008484	cpsf1	100	78.813	Lepisosteus_oculatus
ENSOGAG00000000315	CPSF1	97	95.851	ENSLAFG00000022601	CPSF1	100	95.851	Loxodonta_africana
ENSOGAG00000000315	CPSF1	100	97.434	ENSMFAG00000037013	CPSF1	100	97.434	Macaca_fascicularis
ENSOGAG00000000315	CPSF1	100	97.503	ENSMMUG00000007380	CPSF1	100	97.503	Macaca_mulatta
ENSOGAG00000000315	CPSF1	97	97.703	ENSMNEG00000043564	CPSF1	99	97.703	Macaca_nemestrina
ENSOGAG00000000315	CPSF1	100	97.434	ENSMLEG00000043010	CPSF1	100	97.434	Mandrillus_leucophaeus
ENSOGAG00000000315	CPSF1	100	78.716	ENSMAMG00000003803	cpsf1	100	78.851	Mastacembelus_armatus
ENSOGAG00000000315	CPSF1	100	77.647	ENSMZEG00005001168	cpsf1	100	77.785	Maylandia_zebra
ENSOGAG00000000315	CPSF1	100	96.810	ENSMAUG00000003601	Cpsf1	100	96.810	Mesocricetus_auratus
ENSOGAG00000000315	CPSF1	100	98.752	ENSMICG00000015767	CPSF1	100	98.752	Microcebus_murinus
ENSOGAG00000000315	CPSF1	100	96.810	ENSMOCG00000022758	Cpsf1	100	96.810	Microtus_ochrogaster
ENSOGAG00000000315	CPSF1	100	79.184	ENSMMOG00000021245	cpsf1	100	79.322	Mola_mola
ENSOGAG00000000315	CPSF1	100	93.172	ENSMODG00000010755	CPSF1	100	93.172	Monodelphis_domestica
ENSOGAG00000000315	CPSF1	100	77.943	ENSMALG00000020545	cpsf1	100	78.078	Monopterus_albus
ENSOGAG00000000315	CPSF1	100	97.226	MGP_CAROLIEiJ_G0019936	Cpsf1	100	97.226	Mus_caroli
ENSOGAG00000000315	CPSF1	100	97.087	ENSMUSG00000034022	Cpsf1	100	97.087	Mus_musculus
ENSOGAG00000000315	CPSF1	100	97.157	MGP_PahariEiJ_G0019946	Cpsf1	100	97.157	Mus_pahari
ENSOGAG00000000315	CPSF1	100	97.157	MGP_SPRETEiJ_G0020839	Cpsf1	100	97.157	Mus_spretus
ENSOGAG00000000315	CPSF1	94	96.074	ENSMPUG00000006419	CPSF1	93	96.074	Mustela_putorius_furo
ENSOGAG00000000315	CPSF1	100	96.602	ENSNGAG00000022460	Cpsf1	100	96.602	Nannospalax_galili
ENSOGAG00000000315	CPSF1	100	74.965	ENSNBRG00000000813	cpsf1	100	74.965	Neolamprologus_brichardi
ENSOGAG00000000315	CPSF1	86	85.925	ENSNLEG00000010633	-	100	88.889	Nomascus_leucogenys
ENSOGAG00000000315	CPSF1	82	97.674	ENSMEUG00000014922	CPSF1	85	97.674	Notamacropus_eugenii
ENSOGAG00000000315	CPSF1	61	97.449	ENSOPRG00000004693	-	71	97.449	Ochotona_princeps
ENSOGAG00000000315	CPSF1	100	97.434	ENSODEG00000013995	CPSF1	100	97.434	Octodon_degus
ENSOGAG00000000315	CPSF1	100	80.069	ENSONIG00000007676	cpsf1	100	80.277	Oreochromis_niloticus
ENSOGAG00000000315	CPSF1	58	92.143	ENSOANG00000010716	CPSF1	88	92.143	Ornithorhynchus_anatinus
ENSOGAG00000000315	CPSF1	100	77.717	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSOGAG00000000315	CPSF1	100	77.785	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSOGAG00000000315	CPSF1	100	77.702	ENSORLG00015009979	cpsf1	100	77.702	Oryzias_latipes_hsok
ENSOGAG00000000315	CPSF1	100	77.536	ENSOMEG00000011849	cpsf1	100	77.808	Oryzias_melastigma
ENSOGAG00000000315	CPSF1	100	97.573	ENSPPAG00000019280	CPSF1	100	97.573	Pan_paniscus
ENSOGAG00000000315	CPSF1	100	95.910	ENSPTRG00000051253	-	100	95.910	Pan_troglodytes
ENSOGAG00000000315	CPSF1	100	97.573	ENSPTRG00000049288	-	100	97.573	Pan_troglodytes
ENSOGAG00000000315	CPSF1	97	97.559	ENSPANG00000015005	CPSF1	99	97.559	Papio_anubis
ENSOGAG00000000315	CPSF1	100	80.636	ENSPKIG00000002582	cpsf1	100	81.350	Paramormyrops_kingsleyae
ENSOGAG00000000315	CPSF1	100	93.103	ENSPCIG00000009035	CPSF1	100	93.103	Phascolarctos_cinereus
ENSOGAG00000000315	CPSF1	100	76.996	ENSPFOG00000012870	cpsf1	100	76.928	Poecilia_formosa
ENSOGAG00000000315	CPSF1	100	76.538	ENSPREG00000016307	cpsf1	100	76.606	Poecilia_reticulata
ENSOGAG00000000315	CPSF1	100	89.459	ENSPPYG00000018973	CPSF1	100	89.459	Pongo_abelii
ENSOGAG00000000315	CPSF1	91	95.170	ENSPCAG00000011541	CPSF1	94	95.170	Procavia_capensis
ENSOGAG00000000315	CPSF1	100	95.149	ENSPCOG00000020001	CPSF1	100	95.149	Propithecus_coquereli
ENSOGAG00000000315	CPSF1	91	99.143	ENSPVAG00000006761	CPSF1	91	99.143	Pteropus_vampyrus
ENSOGAG00000000315	CPSF1	100	78.757	ENSPNYG00000004906	cpsf1	100	78.893	Pundamilia_nyererei
ENSOGAG00000000315	CPSF1	100	75.345	ENSPNAG00000024395	cpsf1	100	75.345	Pygocentrus_nattereri
ENSOGAG00000000315	CPSF1	100	97.087	ENSRNOG00000030705	Cpsf1	100	97.087	Rattus_norvegicus
ENSOGAG00000000315	CPSF1	100	97.434	ENSRBIG00000044907	CPSF1	100	97.434	Rhinopithecus_bieti
ENSOGAG00000000315	CPSF1	100	97.365	ENSRROG00000044861	CPSF1	100	97.365	Rhinopithecus_roxellana
ENSOGAG00000000315	CPSF1	97	97.559	ENSSBOG00000027177	CPSF1	99	97.559	Saimiri_boliviensis_boliviensis
ENSOGAG00000000315	CPSF1	100	92.966	ENSSHAG00000006500	CPSF1	100	92.966	Sarcophilus_harrisii
ENSOGAG00000000315	CPSF1	100	78.512	ENSSFOG00015004606	cpsf1	100	81.382	Scleropages_formosus
ENSOGAG00000000315	CPSF1	100	78.214	ENSSMAG00000020547	cpsf1	100	78.349	Scophthalmus_maximus
ENSOGAG00000000315	CPSF1	100	79.544	ENSSDUG00000001100	cpsf1	100	79.820	Seriola_dumerili
ENSOGAG00000000315	CPSF1	100	79.737	ENSSLDG00000003619	cpsf1	100	79.806	Seriola_lalandi_dorsalis
ENSOGAG00000000315	CPSF1	89	95.833	ENSSARG00000003643	CPSF1	92	95.833	Sorex_araneus
ENSOGAG00000000315	CPSF1	96	87.527	ENSSPUG00000014396	CPSF1	100	87.527	Sphenodon_punctatus
ENSOGAG00000000315	CPSF1	100	78.161	ENSSPAG00000005349	cpsf1	100	78.364	Stegastes_partitus
ENSOGAG00000000315	CPSF1	100	96.194	ENSSSCG00000005906	CPSF1	100	96.194	Sus_scrofa
ENSOGAG00000000315	CPSF1	96	77.832	ENSTRUG00000013134	cpsf1	99	77.972	Takifugu_rubripes
ENSOGAG00000000315	CPSF1	100	78.900	ENSTNIG00000014027	cpsf1	100	78.969	Tetraodon_nigroviridis
ENSOGAG00000000315	CPSF1	77	88.966	ENSTBEG00000001756	CPSF1	91	88.966	Tupaia_belangeri
ENSOGAG00000000315	CPSF1	90	97.927	ENSTTRG00000001937	CPSF1	90	97.927	Tursiops_truncatus
ENSOGAG00000000315	CPSF1	97	96.989	ENSUAMG00000006476	CPSF1	98	96.989	Ursus_americanus
ENSOGAG00000000315	CPSF1	100	78.008	ENSXCOG00000003608	cpsf1	100	78.147	Xiphophorus_couchianus
ENSOGAG00000000315	CPSF1	100	77.348	ENSXMAG00000005798	cpsf1	100	77.624	Xiphophorus_maculatus