EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000001425 (Gene tree)
Gene ID: 100940565
Gene Symbol: RTCB
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 21559 bases
Position: chrGL873526.1:14344352-14365910
Accession: 100940565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000001268	RtcB	PF01139.17	4.1e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000001426	RTCB-201	1828	-	ENSOGAP00000001268	505 (aa)	XP_003783317	B5FW82

Gene Model

Click here to download ENSOGAG00000001425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000001425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000001425	RTCB	100	99.208	ENSG00000100220	RTCB	100	99.208	Homo_sapiens
ENSOGAG00000001425	RTCB	100	93.861	ENSAPOG00000006040	rtcb	100	93.861	Acanthochromis_polyacanthus
ENSOGAG00000001425	RTCB	100	99.010	ENSAMEG00000016152	RTCB	100	99.010	Ailuropoda_melanoleuca
ENSOGAG00000001425	RTCB	100	89.505	ENSACIG00000009083	rtcb	100	89.505	Amphilophus_citrinellus
ENSOGAG00000001425	RTCB	100	94.059	ENSAOCG00000005662	rtcb	100	94.783	Amphiprion_ocellaris
ENSOGAG00000001425	RTCB	100	94.059	ENSAPEG00000024701	rtcb	100	94.059	Amphiprion_percula
ENSOGAG00000001425	RTCB	96	89.117	ENSAPEG00000024653	rtcb	100	89.117	Amphiprion_percula
ENSOGAG00000001425	RTCB	100	94.059	ENSATEG00000000618	rtcb	100	94.059	Anabas_testudineus
ENSOGAG00000001425	RTCB	100	93.064	ENSACAG00000014817	RTCB	100	93.064	Anolis_carolinensis
ENSOGAG00000001425	RTCB	100	62.846	ENSANAG00000023724	-	100	62.846	Aotus_nancymaae
ENSOGAG00000001425	RTCB	100	83.762	ENSANAG00000018191	-	91	83.762	Aotus_nancymaae
ENSOGAG00000001425	RTCB	100	92.475	ENSACLG00000008367	rtcb	100	93.478	Astatotilapia_calliptera
ENSOGAG00000001425	RTCB	100	93.663	ENSAMXG00000042320	rtcb	100	93.663	Astyanax_mexicanus
ENSOGAG00000001425	RTCB	100	98.812	ENSBTAG00000011070	RTCB	100	98.812	Bos_taurus
ENSOGAG00000001425	RTCB	100	73.069	WBGene00008877	rtcb-1	100	73.069	Caenorhabditis_elegans
ENSOGAG00000001425	RTCB	100	99.208	ENSCJAG00000006128	RTCB	100	99.208	Callithrix_jacchus
ENSOGAG00000001425	RTCB	100	99.010	ENSCAFG00000001785	RTCB	100	99.010	Canis_familiaris
ENSOGAG00000001425	RTCB	100	94.851	ENSCAFG00000010789	-	100	94.851	Canis_familiaris
ENSOGAG00000001425	RTCB	87	95.682	ENSCAFG00020018953	-	99	95.682	Canis_lupus_dingo
ENSOGAG00000001425	RTCB	100	99.010	ENSCAFG00020004890	-	100	99.010	Canis_lupus_dingo
ENSOGAG00000001425	RTCB	100	99.010	ENSCHIG00000027009	-	100	99.010	Capra_hircus
ENSOGAG00000001425	RTCB	100	98.812	ENSTSYG00000012320	RTCB	100	98.812	Carlito_syrichta
ENSOGAG00000001425	RTCB	94	98.532	ENSCAPG00000011647	RTCB	96	98.532	Cavia_aperea
ENSOGAG00000001425	RTCB	100	99.208	ENSCCAG00000000618	RTCB	100	99.208	Cebus_capucinus
ENSOGAG00000001425	RTCB	100	98.812	ENSCATG00000033424	RTCB	100	98.812	Cercocebus_atys
ENSOGAG00000001425	RTCB	100	98.614	ENSCLAG00000007997	RTCB	100	98.614	Chinchilla_lanigera
ENSOGAG00000001425	RTCB	100	99.010	ENSCSAG00000008351	RTCB	100	99.010	Chlorocebus_sabaeus
ENSOGAG00000001425	RTCB	100	84.752	ENSCHOG00000009123	RTCB	100	84.752	Choloepus_hoffmanni
ENSOGAG00000001425	RTCB	100	95.842	ENSCPBG00000023184	RTCB	100	95.842	Chrysemys_picta_bellii
ENSOGAG00000001425	RTCB	100	81.782	ENSCING00000003830	-	100	81.782	Ciona_intestinalis
ENSOGAG00000001425	RTCB	100	82.178	ENSCSAVG00000008124	-	99	82.178	Ciona_savignyi
ENSOGAG00000001425	RTCB	100	95.050	ENSCANG00000001891	RTCB	100	95.050	Colobus_angolensis_palliatus
ENSOGAG00000001425	RTCB	100	98.614	ENSCGRG00001011173	Rtcb	100	98.614	Cricetulus_griseus_chok1gshd
ENSOGAG00000001425	RTCB	93	98.938	ENSCGRG00000009587	-	96	98.938	Cricetulus_griseus_crigri
ENSOGAG00000001425	RTCB	100	93.465	ENSCSEG00000003986	rtcb	100	93.465	Cynoglossus_semilaevis
ENSOGAG00000001425	RTCB	82	92.788	ENSCVAG00000000569	rtcb	95	92.788	Cyprinodon_variegatus
ENSOGAG00000001425	RTCB	100	93.267	ENSDARG00000101047	rtcb	100	93.267	Danio_rerio
ENSOGAG00000001425	RTCB	80	96.806	ENSDNOG00000012425	RTCB	99	96.806	Dasypus_novemcinctus
ENSOGAG00000001425	RTCB	100	98.218	ENSDORG00000010855	Rtcb	100	98.218	Dipodomys_ordii
ENSOGAG00000001425	RTCB	99	85.089	FBgn0032781	RtcB	99	85.089	Drosophila_melanogaster
ENSOGAG00000001425	RTCB	100	92.277	ENSETEG00000001988	RTCB	100	92.277	Echinops_telfairi
ENSOGAG00000001425	RTCB	100	85.347	ENSEBUG00000014235	rtcb	100	85.347	Eptatretus_burgeri
ENSOGAG00000001425	RTCB	100	99.010	ENSEASG00005019059	RTCB	100	99.010	Equus_asinus_asinus
ENSOGAG00000001425	RTCB	100	99.010	ENSECAG00000023998	RTCB	100	99.010	Equus_caballus
ENSOGAG00000001425	RTCB	89	89.709	ENSEEUG00000006251	RTCB	100	89.709	Erinaceus_europaeus
ENSOGAG00000001425	RTCB	100	82.042	ENSELUG00000009275	rtcb	100	82.042	Esox_lucius
ENSOGAG00000001425	RTCB	100	99.208	ENSFCAG00000026480	RTCB	100	99.208	Felis_catus
ENSOGAG00000001425	RTCB	100	96.832	ENSFALG00000013334	RTCB	100	96.832	Ficedula_albicollis
ENSOGAG00000001425	RTCB	100	99.010	ENSFDAG00000018150	RTCB	100	99.010	Fukomys_damarensis
ENSOGAG00000001425	RTCB	100	93.663	ENSFHEG00000009595	rtcb	100	93.663	Fundulus_heteroclitus
ENSOGAG00000001425	RTCB	100	91.089	ENSGMOG00000018882	rtcb	100	91.089	Gadus_morhua
ENSOGAG00000001425	RTCB	100	96.634	ENSGALG00000012611	RTCB	100	96.634	Gallus_gallus
ENSOGAG00000001425	RTCB	100	94.059	ENSGAFG00000004198	rtcb	100	94.059	Gambusia_affinis
ENSOGAG00000001425	RTCB	100	93.069	ENSGACG00000000586	rtcb	100	93.069	Gasterosteus_aculeatus
ENSOGAG00000001425	RTCB	93	95.319	ENSGAGG00000019133	RTCB	98	95.319	Gopherus_agassizii
ENSOGAG00000001425	RTCB	100	99.208	ENSGGOG00000011402	RTCB	100	99.208	Gorilla_gorilla
ENSOGAG00000001425	RTCB	100	92.475	ENSHBUG00000020571	rtcb	100	92.475	Haplochromis_burtoni
ENSOGAG00000001425	RTCB	93	69.915	ENSHGLG00000001066	-	99	69.915	Heterocephalus_glaber_female
ENSOGAG00000001425	RTCB	100	99.010	ENSHGLG00000004492	RTCB	100	99.010	Heterocephalus_glaber_female
ENSOGAG00000001425	RTCB	100	99.010	ENSHGLG00100008965	RTCB	100	99.010	Heterocephalus_glaber_male
ENSOGAG00000001425	RTCB	100	91.124	ENSHCOG00000006450	rtcb	100	91.124	Hippocampus_comes
ENSOGAG00000001425	RTCB	100	93.861	ENSIPUG00000015443	rtcb	100	93.861	Ictalurus_punctatus
ENSOGAG00000001425	RTCB	100	99.010	ENSSTOG00000003878	RTCB	100	99.010	Ictidomys_tridecemlineatus
ENSOGAG00000001425	RTCB	100	98.218	ENSJJAG00000010667	Rtcb	100	98.218	Jaculus_jaculus
ENSOGAG00000001425	RTCB	100	93.663	ENSKMAG00000013178	rtcb	100	93.663	Kryptolebias_marmoratus
ENSOGAG00000001425	RTCB	100	92.871	ENSLBEG00000000214	rtcb	100	92.871	Labrus_bergylta
ENSOGAG00000001425	RTCB	100	93.861	ENSLBEG00000010566	RTCB	100	93.861	Labrus_bergylta
ENSOGAG00000001425	RTCB	100	94.653	ENSLACG00000013033	RTCB	100	94.653	Latimeria_chalumnae
ENSOGAG00000001425	RTCB	100	94.257	ENSLOCG00000016515	rtcb	99	94.257	Lepisosteus_oculatus
ENSOGAG00000001425	RTCB	100	98.416	ENSLAFG00000002082	RTCB	100	98.416	Loxodonta_africana
ENSOGAG00000001425	RTCB	100	99.010	ENSMFAG00000034419	RTCB	100	99.010	Macaca_fascicularis
ENSOGAG00000001425	RTCB	100	99.010	ENSMMUG00000006720	RTCB	100	99.010	Macaca_mulatta
ENSOGAG00000001425	RTCB	100	99.010	ENSMNEG00000040669	RTCB	100	99.010	Macaca_nemestrina
ENSOGAG00000001425	RTCB	100	98.812	ENSMLEG00000040505	RTCB	100	98.812	Mandrillus_leucophaeus
ENSOGAG00000001425	RTCB	100	93.663	ENSMAMG00000020676	rtcb	100	93.663	Mastacembelus_armatus
ENSOGAG00000001425	RTCB	100	92.475	ENSMZEG00005018942	rtcb	100	92.475	Maylandia_zebra
ENSOGAG00000001425	RTCB	100	96.252	ENSMGAG00000012805	RTCB	100	96.252	Meleagris_gallopavo
ENSOGAG00000001425	RTCB	60	98.936	ENSMAUG00000008301	Rtcb	100	98.936	Mesocricetus_auratus
ENSOGAG00000001425	RTCB	100	79.406	ENSMICG00000036677	-	100	79.406	Microcebus_murinus
ENSOGAG00000001425	RTCB	100	99.406	ENSMICG00000013303	-	100	99.406	Microcebus_murinus
ENSOGAG00000001425	RTCB	100	98.614	ENSMOCG00000002440	Rtcb	100	98.614	Microtus_ochrogaster
ENSOGAG00000001425	RTCB	100	94.059	ENSMMOG00000005987	rtcb	100	94.059	Mola_mola
ENSOGAG00000001425	RTCB	100	97.624	ENSMODG00000001414	RTCB	100	97.624	Monodelphis_domestica
ENSOGAG00000001425	RTCB	100	94.257	ENSMALG00000007603	rtcb	100	94.257	Monopterus_albus
ENSOGAG00000001425	RTCB	100	99.010	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.010	Mus_caroli
ENSOGAG00000001425	RTCB	100	99.010	ENSMUSG00000001783	Rtcb	100	99.010	Mus_musculus
ENSOGAG00000001425	RTCB	100	99.010	MGP_PahariEiJ_G0031396	Rtcb	100	99.010	Mus_pahari
ENSOGAG00000001425	RTCB	100	99.010	MGP_SPRETEiJ_G0016507	Rtcb	100	99.010	Mus_spretus
ENSOGAG00000001425	RTCB	100	99.010	ENSMPUG00000012285	RTCB	100	99.010	Mustela_putorius_furo
ENSOGAG00000001425	RTCB	100	96.647	ENSMLUG00000007803	RTCB	100	96.647	Myotis_lucifugus
ENSOGAG00000001425	RTCB	75	97.333	ENSNGAG00000005093	Rtcb	100	97.333	Nannospalax_galili
ENSOGAG00000001425	RTCB	100	92.673	ENSNBRG00000017202	rtcb	100	92.673	Neolamprologus_brichardi
ENSOGAG00000001425	RTCB	100	99.208	ENSNLEG00000004960	RTCB	100	99.208	Nomascus_leucogenys
ENSOGAG00000001425	RTCB	100	72.277	ENSMEUG00000007809	-	100	72.277	Notamacropus_eugenii
ENSOGAG00000001425	RTCB	73	97.500	ENSOPRG00000003488	RTCB	79	97.500	Ochotona_princeps
ENSOGAG00000001425	RTCB	100	65.149	ENSODEG00000005042	-	100	65.149	Octodon_degus
ENSOGAG00000001425	RTCB	82	98.113	ENSODEG00000013033	-	100	98.113	Octodon_degus
ENSOGAG00000001425	RTCB	100	93.663	ENSONIG00000007474	rtcb	100	93.663	Oreochromis_niloticus
ENSOGAG00000001425	RTCB	100	97.624	ENSOANG00000005524	RTCB	100	97.624	Ornithorhynchus_anatinus
ENSOGAG00000001425	RTCB	93	98.936	ENSOCUG00000008270	RTCB	96	98.936	Oryctolagus_cuniculus
ENSOGAG00000001425	RTCB	100	93.069	ENSORLG00000020093	rtcb	100	93.069	Oryzias_latipes
ENSOGAG00000001425	RTCB	100	93.069	ENSORLG00020003706	rtcb	100	93.069	Oryzias_latipes_hni
ENSOGAG00000001425	RTCB	100	93.267	ENSORLG00015002968	rtcb	100	93.267	Oryzias_latipes_hsok
ENSOGAG00000001425	RTCB	100	92.871	ENSOMEG00000021278	rtcb	100	92.871	Oryzias_melastigma
ENSOGAG00000001425	RTCB	100	99.010	ENSOARG00000018008	RTCB	100	99.010	Ovis_aries
ENSOGAG00000001425	RTCB	100	99.208	ENSPPAG00000028667	RTCB	100	99.208	Pan_paniscus
ENSOGAG00000001425	RTCB	100	99.208	ENSPPRG00000004038	RTCB	100	99.208	Panthera_pardus
ENSOGAG00000001425	RTCB	94	95.789	ENSPTIG00000020499	RTCB	97	95.789	Panthera_tigris_altaica
ENSOGAG00000001425	RTCB	100	99.208	ENSPTRG00000014287	RTCB	100	99.208	Pan_troglodytes
ENSOGAG00000001425	RTCB	100	99.010	ENSPANG00000016035	RTCB	100	99.010	Papio_anubis
ENSOGAG00000001425	RTCB	100	92.277	ENSPKIG00000001881	rtcb	100	92.277	Paramormyrops_kingsleyae
ENSOGAG00000001425	RTCB	91	97.391	ENSPSIG00000011690	RTCB	100	97.391	Pelodiscus_sinensis
ENSOGAG00000001425	RTCB	100	93.861	ENSPMGG00000016672	rtcb	100	93.861	Periophthalmus_magnuspinnatus
ENSOGAG00000001425	RTCB	100	99.010	ENSPEMG00000019548	Rtcb	100	99.010	Peromyscus_maniculatus_bairdii
ENSOGAG00000001425	RTCB	100	90.891	ENSPMAG00000005657	rtcb	100	90.891	Petromyzon_marinus
ENSOGAG00000001425	RTCB	100	98.020	ENSPCIG00000009467	RTCB	100	98.020	Phascolarctos_cinereus
ENSOGAG00000001425	RTCB	100	94.455	ENSPFOG00000003058	rtcb	100	94.455	Poecilia_formosa
ENSOGAG00000001425	RTCB	100	94.257	ENSPLAG00000017663	rtcb	100	94.257	Poecilia_latipinna
ENSOGAG00000001425	RTCB	100	94.455	ENSPMEG00000006227	rtcb	100	94.455	Poecilia_mexicana
ENSOGAG00000001425	RTCB	100	94.257	ENSPREG00000018467	rtcb	100	94.257	Poecilia_reticulata
ENSOGAG00000001425	RTCB	100	99.208	ENSPPYG00000011752	RTCB	100	99.208	Pongo_abelii
ENSOGAG00000001425	RTCB	93	81.356	ENSPCAG00000013641	RTCB	100	81.356	Procavia_capensis
ENSOGAG00000001425	RTCB	100	99.208	ENSPCOG00000017243	RTCB	100	99.208	Propithecus_coquereli
ENSOGAG00000001425	RTCB	93	98.723	ENSPVAG00000002380	RTCB	100	98.723	Pteropus_vampyrus
ENSOGAG00000001425	RTCB	100	92.475	ENSPNYG00000022760	rtcb	100	92.475	Pundamilia_nyererei
ENSOGAG00000001425	RTCB	100	94.455	ENSPNAG00000009209	rtcb	100	94.455	Pygocentrus_nattereri
ENSOGAG00000001425	RTCB	100	99.010	ENSRNOG00000004813	Rtcb	100	99.010	Rattus_norvegicus
ENSOGAG00000001425	RTCB	100	89.921	ENSRBIG00000042090	RTCB	100	89.921	Rhinopithecus_bieti
ENSOGAG00000001425	RTCB	100	94.653	ENSSBOG00000020085	-	100	94.653	Saimiri_boliviensis_boliviensis
ENSOGAG00000001425	RTCB	94	98.945	ENSSHAG00000016277	RTCB	100	98.945	Sarcophilus_harrisii
ENSOGAG00000001425	RTCB	100	93.465	ENSSFOG00015011572	RTCB	100	93.465	Scleropages_formosus
ENSOGAG00000001425	RTCB	100	92.871	ENSSFOG00015000763	rtcb	100	92.871	Scleropages_formosus
ENSOGAG00000001425	RTCB	100	89.901	ENSSMAG00000005096	rtcb	100	89.901	Scophthalmus_maximus
ENSOGAG00000001425	RTCB	100	93.069	ENSSDUG00000012605	rtcb	100	93.069	Seriola_dumerili
ENSOGAG00000001425	RTCB	100	93.069	ENSSLDG00000019458	rtcb	100	93.069	Seriola_lalandi_dorsalis
ENSOGAG00000001425	RTCB	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSOGAG00000001425	RTCB	100	95.446	ENSSPUG00000012814	RTCB	100	95.446	Sphenodon_punctatus
ENSOGAG00000001425	RTCB	100	94.059	ENSSPAG00000004623	rtcb	100	94.059	Stegastes_partitus
ENSOGAG00000001425	RTCB	100	99.208	ENSSSCG00000000158	RTCB	100	99.208	Sus_scrofa
ENSOGAG00000001425	RTCB	100	96.832	ENSTGUG00000010947	RTCB	99	96.832	Taeniopygia_guttata
ENSOGAG00000001425	RTCB	91	94.783	ENSTRUG00000009880	rtcb	100	94.783	Takifugu_rubripes
ENSOGAG00000001425	RTCB	100	92.673	ENSTNIG00000002484	rtcb	100	92.673	Tetraodon_nigroviridis
ENSOGAG00000001425	RTCB	100	85.347	ENSTBEG00000004418	RTCB	100	85.347	Tupaia_belangeri
ENSOGAG00000001425	RTCB	93	98.511	ENSTTRG00000006417	RTCB	100	98.511	Tursiops_truncatus
ENSOGAG00000001425	RTCB	100	99.010	ENSUAMG00000022792	RTCB	100	99.010	Ursus_americanus
ENSOGAG00000001425	RTCB	100	99.010	ENSUMAG00000017225	RTCB	100	99.010	Ursus_maritimus
ENSOGAG00000001425	RTCB	100	99.010	ENSVPAG00000005375	RTCB	100	99.010	Vicugna_pacos
ENSOGAG00000001425	RTCB	100	99.010	ENSVVUG00000023408	RTCB	100	99.017	Vulpes_vulpes
ENSOGAG00000001425	RTCB	100	94.059	ENSXETG00000011523	rtcb	100	94.059	Xenopus_tropicalis
ENSOGAG00000001425	RTCB	100	94.455	ENSXMAG00000002855	rtcb	100	94.455	Xiphophorus_maculatus