EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOGAG00000001680 (Gene tree)
Gene ID
100947235
Gene Symbol
CPSF3
Alias
-
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Otolemur_garnettii
Status
putative
Strand
Plus strand
Length
46890 bases
Position
chrGL873541.1:2078134-2125023
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOGAP00000001501CPSF73-100_CPF11718.81.8e-5411
ENSOGAP00000001501Beta-CaspPF10996.81.8e-3311
ENSOGAP00000001501Lactamase_BPF00753.272.7e-0811
ENSOGAP00000001501RMMBLPF07521.124.3e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOGAT00000001681CPSF3-2012059-ENSOGAP00000001501681 (aa)-H0WJ50
Gene Model
Click here to download ENSOGAG00000001680's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000001680's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOGAG00000001680CPSF37132.008ENSOGAG00000000463INTS118232.008
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOGAG00000001680CPSF310089.620ENSG00000119203CPSF310089.620Homo_sapiens
ENSOGAG00000001680CPSF37383.367ENSAPOG00000012241CPSF39083.300Acanthochromis_polyacanthus
ENSOGAG00000001680CPSF39975.552ENSAPOG00000022087cpsf39875.552Acanthochromis_polyacanthus
ENSOGAG00000001680CPSF310089.474ENSAMEG00000008493CPSF310089.474Ailuropoda_melanoleuca
ENSOGAG00000001680CPSF39275.714ENSACIG00000023663CPSF39975.714Amphilophus_citrinellus
ENSOGAG00000001680CPSF39172.452ENSACIG00000009846cpsf39972.452Amphilophus_citrinellus
ENSOGAG00000001680CPSF39975.552ENSAOCG00000022056cpsf39479.932Amphiprion_ocellaris
ENSOGAG00000001680CPSF39977.794ENSAOCG00000010077CPSF39877.794Amphiprion_ocellaris
ENSOGAG00000001680CPSF39977.794ENSAPEG00000021167CPSF39877.794Amphiprion_percula
ENSOGAG00000001680CPSF39975.700ENSAPEG00000019526cpsf39876.271Amphiprion_percula
ENSOGAG00000001680CPSF39973.088ENSATEG00000014525CPSF39873.088Anabas_testudineus
ENSOGAG00000001680CPSF39975.477ENSATEG00000003959cpsf39975.477Anabas_testudineus
ENSOGAG00000001680CPSF39885.417ENSAPLG00000006941CPSF39885.417Anas_platyrhynchos
ENSOGAG00000001680CPSF39382.362ENSACAG00000001759CPSF39982.362Anolis_carolinensis
ENSOGAG00000001680CPSF310085.526ENSANAG00000031254CPSF310085.526Aotus_nancymaae
ENSOGAG00000001680CPSF39775.639ENSACLG00000014484cpsf39975.639Astatotilapia_calliptera
ENSOGAG00000001680CPSF39275.556ENSACLG00000018846CPSF39975.556Astatotilapia_calliptera
ENSOGAG00000001680CPSF39978.088ENSAMXG00000004786cpsf39878.088Astyanax_mexicanus
ENSOGAG00000001680CPSF310089.474ENSBTAG00000019735CPSF310089.474Bos_taurus
ENSOGAG00000001680CPSF39151.496WBGene00013460cpsf-38951.496Caenorhabditis_elegans
ENSOGAG00000001680CPSF310089.474ENSCJAG00000006276CPSF310089.474Callithrix_jacchus
ENSOGAG00000001680CPSF310089.474ENSCAFG00000003375CPSF39589.474Canis_familiaris
ENSOGAG00000001680CPSF39089.015ENSCAFG00020026799CPSF310089.015Canis_lupus_dingo
ENSOGAG00000001680CPSF310089.474ENSCHIG00000013973CPSF310089.474Capra_hircus
ENSOGAG00000001680CPSF310089.620ENSTSYG00000002967CPSF310089.620Carlito_syrichta
ENSOGAG00000001680CPSF39887.556ENSCAPG00000013851CPSF310087.556Cavia_aperea
ENSOGAG00000001680CPSF310087.865ENSCPOG00000011299CPSF310087.865Cavia_porcellus
ENSOGAG00000001680CPSF310089.474ENSCCAG00000036730CPSF310089.474Cebus_capucinus
ENSOGAG00000001680CPSF310087.007ENSCATG00000014770CPSF39988.296Cercocebus_atys
ENSOGAG00000001680CPSF310087.573ENSCLAG00000002727CPSF310087.573Chinchilla_lanigera
ENSOGAG00000001680CPSF310082.164ENSCSAG00000007125CPSF310082.164Chlorocebus_sabaeus
ENSOGAG00000001680CPSF372100.000ENSCHOG00000000180CPSF370100.000Choloepus_hoffmanni
ENSOGAG00000001680CPSF39985.777ENSCPBG00000014074CPSF39985.777Chrysemys_picta_bellii
ENSOGAG00000001680CPSF39960.146ENSCING00000007214-9860.146Ciona_intestinalis
ENSOGAG00000001680CPSF310076.462ENSCANG00000034435CPSF310076.462Colobus_angolensis_palliatus
ENSOGAG00000001680CPSF310088.889ENSCGRG00001013134Cpsf310088.889Cricetulus_griseus_chok1gshd
ENSOGAG00000001680CPSF310088.889ENSCGRG00000018319Cpsf310088.889Cricetulus_griseus_crigri
ENSOGAG00000001680CPSF39976.652ENSCSEG00000002021CPSF39975.889Cynoglossus_semilaevis
ENSOGAG00000001680CPSF39978.088ENSCVAG00000015067CPSF39878.088Cyprinodon_variegatus
ENSOGAG00000001680CPSF39978.824ENSDARG00000027649cpsf39878.824Danio_rerio
ENSOGAG00000001680CPSF310088.029ENSDNOG00000008940CPSF39588.029Dasypus_novemcinctus
ENSOGAG00000001680CPSF39588.940ENSDORG00000014263Cpsf310088.940Dipodomys_ordii
ENSOGAG00000001680CPSF39959.057FBgn0261065Cpsf739859.057Drosophila_melanogaster
ENSOGAG00000001680CPSF39575.422ENSETEG00000003893CPSF310075.422Echinops_telfairi
ENSOGAG00000001680CPSF39969.054ENSEBUG00000009018cpsf39869.198Eptatretus_burgeri
ENSOGAG00000001680CPSF310089.474ENSEASG00005003970CPSF310089.474Equus_asinus_asinus
ENSOGAG00000001680CPSF310089.474ENSECAG00000019911CPSF310089.474Equus_caballus
ENSOGAG00000001680CPSF310080.409ENSEEUG00000015422CPSF310080.409Erinaceus_europaeus
ENSOGAG00000001680CPSF39978.088ENSELUG00000013775cpsf39878.088Esox_lucius
ENSOGAG00000001680CPSF310089.474ENSFCAG00000007852CPSF310089.474Felis_catus
ENSOGAG00000001680CPSF39585.008ENSFALG00000006572CPSF310085.008Ficedula_albicollis
ENSOGAG00000001680CPSF39987.537ENSFDAG00000006317CPSF39987.537Fukomys_damarensis
ENSOGAG00000001680CPSF35959.268ENSFHEG00000012186CPSF39959.268Fundulus_heteroclitus
ENSOGAG00000001680CPSF39975.258ENSFHEG00000014774cpsf39875.258Fundulus_heteroclitus
ENSOGAG00000001680CPSF39976.799ENSGMOG00000003157cpsf39976.799Gadus_morhua
ENSOGAG00000001680CPSF39984.875ENSGALG00000016424CPSF39984.875Gallus_gallus
ENSOGAG00000001680CPSF39272.178ENSGAFG00000019449cpsf39972.178Gambusia_affinis
ENSOGAG00000001680CPSF39977.909ENSGAFG00000008016CPSF39877.909Gambusia_affinis
ENSOGAG00000001680CPSF36985.225ENSGAGG00000025583CPSF39385.225Gopherus_agassizii
ENSOGAG00000001680CPSF310087.554ENSGGOG00000001757CPSF310088.976Gorilla_gorilla
ENSOGAG00000001680CPSF35971.358ENSHBUG00000014332CPSF39971.358Haplochromis_burtoni
ENSOGAG00000001680CPSF39975.771ENSHBUG00000001188cpsf39975.771Haplochromis_burtoni
ENSOGAG00000001680CPSF310086.988ENSHGLG00000000666CPSF39986.988Heterocephalus_glaber_female
ENSOGAG00000001680CPSF310086.988ENSHGLG00100007765CPSF39986.988Heterocephalus_glaber_male
ENSOGAG00000001680CPSF39976.176ENSHCOG00000015957CPSF39776.176Hippocampus_comes
ENSOGAG00000001680CPSF39975.073ENSHCOG00000007251cpsf39975.073Hippocampus_comes
ENSOGAG00000001680CPSF39976.912ENSIPUG00000023488cpsf39876.912Ictalurus_punctatus
ENSOGAG00000001680CPSF310089.181ENSSTOG00000004476CPSF310089.181Ictidomys_tridecemlineatus
ENSOGAG00000001680CPSF310087.719ENSJJAG00000023415Cpsf310087.719Jaculus_jaculus
ENSOGAG00000001680CPSF39975.000ENSKMAG00000002806cpsf39875.000Kryptolebias_marmoratus
ENSOGAG00000001680CPSF39977.500ENSKMAG00000007317CPSF39877.500Kryptolebias_marmoratus
ENSOGAG00000001680CPSF39578.395ENSLBEG00000013492CPSF39878.395Labrus_bergylta
ENSOGAG00000001680CPSF35569.437ENSLBEG00000015018-9969.437Labrus_bergylta
ENSOGAG00000001680CPSF39969.412ENSLBEG00000020569cpsf39469.412Labrus_bergylta
ENSOGAG00000001680CPSF39979.087ENSLACG00000008308CPSF39879.087Latimeria_chalumnae
ENSOGAG00000001680CPSF39979.148ENSLOCG00000016823cpsf39879.148Lepisosteus_oculatus
ENSOGAG00000001680CPSF39987.794ENSLAFG00000009467CPSF310087.794Loxodonta_africana
ENSOGAG00000001680CPSF310089.620ENSMFAG00000001339CPSF310089.620Macaca_fascicularis
ENSOGAG00000001680CPSF39589.026ENSMMUG00000018038CPSF310089.026Macaca_mulatta
ENSOGAG00000001680CPSF310076.901ENSMNEG00000039447CPSF310076.901Macaca_nemestrina
ENSOGAG00000001680CPSF310089.766ENSMLEG00000026825CPSF310089.766Mandrillus_leucophaeus
ENSOGAG00000001680CPSF39975.847ENSMAMG00000003076cpsf39875.847Mastacembelus_armatus
ENSOGAG00000001680CPSF39274.525ENSMAMG00000008835CPSF39974.525Mastacembelus_armatus
ENSOGAG00000001680CPSF39975.771ENSMZEG00005014358cpsf39975.771Maylandia_zebra
ENSOGAG00000001680CPSF39978.382ENSMZEG00005006258CPSF39878.382Maylandia_zebra
ENSOGAG00000001680CPSF39884.708ENSMGAG00000013995CPSF310084.708Meleagris_gallopavo
ENSOGAG00000001680CPSF35586.436ENSMAUG00000000166Cpsf310086.436Mesocricetus_auratus
ENSOGAG00000001680CPSF310083.918ENSMICG00000002363CPSF310083.918Microcebus_murinus
ENSOGAG00000001680CPSF310084.357ENSMOCG00000020067Cpsf310084.357Microtus_ochrogaster
ENSOGAG00000001680CPSF37964.110ENSMMOG00000011923CPSF38469.286Mola_mola
ENSOGAG00000001680CPSF39472.093ENSMMOG00000018212CPSF39872.093Mola_mola
ENSOGAG00000001680CPSF310086.252ENSMODG00000014703CPSF310086.252Monodelphis_domestica
ENSOGAG00000001680CPSF39976.211ENSMALG00000016416cpsf39976.211Monopterus_albus
ENSOGAG00000001680CPSF39373.125ENSMALG00000011474CPSF39973.125Monopterus_albus
ENSOGAG00000001680CPSF310088.596MGP_CAROLIEiJ_G0017640Cpsf310088.596Mus_caroli
ENSOGAG00000001680CPSF310088.596ENSMUSG00000054309Cpsf310088.596Mus_musculus
ENSOGAG00000001680CPSF310088.450MGP_PahariEiJ_G0029397Cpsf310088.450Mus_pahari
ENSOGAG00000001680CPSF310088.596MGP_SPRETEiJ_G0018481Cpsf310088.596Mus_spretus
ENSOGAG00000001680CPSF310088.743ENSMPUG00000013213CPSF310088.743Mustela_putorius_furo
ENSOGAG00000001680CPSF310088.613ENSMLUG00000010636CPSF310088.613Myotis_lucifugus
ENSOGAG00000001680CPSF310088.743ENSNGAG00000019836Cpsf310088.743Nannospalax_galili
ENSOGAG00000001680CPSF39275.556ENSNBRG00000010525CPSF39975.556Neolamprologus_brichardi
ENSOGAG00000001680CPSF39975.330ENSNBRG00000004770cpsf39975.330Neolamprologus_brichardi
ENSOGAG00000001680CPSF310089.620ENSNLEG00000013359CPSF310089.620Nomascus_leucogenys
ENSOGAG00000001680CPSF39261.840ENSMEUG00000013117-9161.840Notamacropus_eugenii
ENSOGAG00000001680CPSF310079.678ENSOPRG00000008902CPSF310079.678Ochotona_princeps
ENSOGAG00000001680CPSF310087.135ENSODEG00000003129CPSF310087.135Octodon_degus
ENSOGAG00000001680CPSF39975.918ENSONIG00000018812cpsf39975.918Oreochromis_niloticus
ENSOGAG00000001680CPSF38389.007ENSOANG00000008577CPSF310089.007Ornithorhynchus_anatinus
ENSOGAG00000001680CPSF310089.181ENSOCUG00000003728CPSF310089.181Oryctolagus_cuniculus
ENSOGAG00000001680CPSF39974.009ENSORLG00000018854cpsf39974.009Oryzias_latipes
ENSOGAG00000001680CPSF39974.009ENSORLG00020013331cpsf39974.009Oryzias_latipes_hni
ENSOGAG00000001680CPSF39974.009ENSORLG00015011017cpsf39974.009Oryzias_latipes_hsok
ENSOGAG00000001680CPSF39974.156ENSOMEG00000010647cpsf39474.156Oryzias_melastigma
ENSOGAG00000001680CPSF310089.474ENSOARG00000015073CPSF310089.474Ovis_aries
ENSOGAG00000001680CPSF310089.766ENSPPAG00000042457CPSF310089.766Pan_paniscus
ENSOGAG00000001680CPSF310089.181ENSPPRG00000016790CPSF310089.181Panthera_pardus
ENSOGAG00000001680CPSF39989.118ENSPTIG00000003920CPSF310088.346Panthera_tigris_altaica
ENSOGAG00000001680CPSF310089.766ENSPTRG00000011638CPSF310089.766Pan_troglodytes
ENSOGAG00000001680CPSF310089.474ENSPANG00000016798CPSF310089.474Papio_anubis
ENSOGAG00000001680CPSF39979.412ENSPKIG00000023646cpsf39978.605Paramormyrops_kingsleyae
ENSOGAG00000001680CPSF39983.724ENSPSIG00000016144CPSF310083.724Pelodiscus_sinensis
ENSOGAG00000001680CPSF38374.171ENSPMGG00000006141-9974.171Periophthalmus_magnuspinnatus
ENSOGAG00000001680CPSF35969.136ENSPMGG00000015311CPSF39969.136Periophthalmus_magnuspinnatus
ENSOGAG00000001680CPSF310088.304ENSPEMG00000017668Cpsf310088.304Peromyscus_maniculatus_bairdii
ENSOGAG00000001680CPSF37878.399ENSPMAG00000004841cpsf39978.399Petromyzon_marinus
ENSOGAG00000001680CPSF39887.106ENSPCIG00000009823CPSF39887.106Phascolarctos_cinereus
ENSOGAG00000001680CPSF39974.780ENSPFOG00000015922cpsf39974.780Poecilia_formosa
ENSOGAG00000001680CPSF39977.761ENSPFOG00000010418-9877.761Poecilia_formosa
ENSOGAG00000001680CPSF39974.780ENSPLAG00000000882cpsf39974.780Poecilia_latipinna
ENSOGAG00000001680CPSF35970.792ENSPLAG00000021300-9970.792Poecilia_latipinna
ENSOGAG00000001680CPSF39974.927ENSPMEG00000018309cpsf39974.927Poecilia_mexicana
ENSOGAG00000001680CPSF39972.206ENSPREG00000004482CPSF39872.206Poecilia_reticulata
ENSOGAG00000001680CPSF39272.019ENSPREG00000014875cpsf39972.019Poecilia_reticulata
ENSOGAG00000001680CPSF310085.234ENSPPYG00000012666CPSF310085.234Pongo_abelii
ENSOGAG00000001680CPSF39559.908ENSPCAG00000015042CPSF310059.908Procavia_capensis
ENSOGAG00000001680CPSF38782.270ENSPCOG00000023016CPSF39682.270Propithecus_coquereli
ENSOGAG00000001680CPSF39989.443ENSPVAG00000005324CPSF39989.443Pteropus_vampyrus
ENSOGAG00000001680CPSF39975.771ENSPNYG00000004405cpsf39975.771Pundamilia_nyererei
ENSOGAG00000001680CPSF37979.190ENSPNYG00000021047CPSF39179.190Pundamilia_nyererei
ENSOGAG00000001680CPSF39977.500ENSPNAG00000023060cpsf39877.500Pygocentrus_nattereri
ENSOGAG00000001680CPSF39988.563ENSRNOG00000052418Cpsf39988.563Rattus_norvegicus
ENSOGAG00000001680CPSF310083.772ENSRBIG00000041615CPSF310083.772Rhinopithecus_bieti
ENSOGAG00000001680CPSF310089.766ENSRROG00000033792CPSF310089.766Rhinopithecus_roxellana
ENSOGAG00000001680CPSF38438.508YLR277CYSH18438.508Saccharomyces_cerevisiae
ENSOGAG00000001680CPSF310083.478ENSSBOG00000027263CPSF310083.478Saimiri_boliviensis_boliviensis
ENSOGAG00000001680CPSF310087.573ENSSHAG00000007024CPSF310087.573Sarcophilus_harrisii
ENSOGAG00000001680CPSF39979.442ENSSFOG00015002108cpsf39979.442Scleropages_formosus
ENSOGAG00000001680CPSF39576.769ENSSMAG00000020534CPSF39676.769Scophthalmus_maximus
ENSOGAG00000001680CPSF39975.918ENSSDUG00000002828cpsf39675.918Seriola_dumerili
ENSOGAG00000001680CPSF39977.941ENSSDUG00000018498CPSF39877.941Seriola_dumerili
ENSOGAG00000001680CPSF39975.918ENSSLDG00000008469cpsf39675.918Seriola_lalandi_dorsalis
ENSOGAG00000001680CPSF39977.941ENSSLDG00000005234CPSF39877.941Seriola_lalandi_dorsalis
ENSOGAG00000001680CPSF39278.669ENSSARG00000005186CPSF39178.669Sorex_araneus
ENSOGAG00000001680CPSF39882.563ENSSPUG00000015525CPSF39782.563Sphenodon_punctatus
ENSOGAG00000001680CPSF39975.588ENSSPAG00000018579cpsf39875.588Stegastes_partitus
ENSOGAG00000001680CPSF39977.647ENSSPAG00000002906CPSF39877.647Stegastes_partitus
ENSOGAG00000001680CPSF39989.312ENSSSCG00000020799CPSF39989.312Sus_scrofa
ENSOGAG00000001680CPSF39985.609ENSTGUG00000013016CPSF39985.609Taeniopygia_guttata
ENSOGAG00000001680CPSF39975.000ENSTRUG00000007030cpsf39775.000Takifugu_rubripes
ENSOGAG00000001680CPSF35963.636ENSTRUG00000013905CPSF39963.636Takifugu_rubripes
ENSOGAG00000001680CPSF38585.753ENSTBEG00000002707CPSF38585.753Tupaia_belangeri
ENSOGAG00000001680CPSF37497.849ENSTTRG00000000861CPSF37497.849Tursiops_truncatus
ENSOGAG00000001680CPSF39986.364ENSUAMG00000007535CPSF39886.364Ursus_americanus
ENSOGAG00000001680CPSF39588.872ENSUMAG00000003676CPSF310088.872Ursus_maritimus
ENSOGAG00000001680CPSF39384.858ENSVPAG00000008041CPSF310084.858Vicugna_pacos
ENSOGAG00000001680CPSF310089.474ENSVVUG00000002194CPSF310089.474Vulpes_vulpes
ENSOGAG00000001680CPSF39980.323ENSXETG00000008263cpsf39880.323Xenopus_tropicalis
ENSOGAG00000001680CPSF35468.194ENSXCOG00000000957-8768.194Xiphophorus_couchianus
ENSOGAG00000001680CPSF39975.073ENSXCOG00000019695cpsf39975.073Xiphophorus_couchianus
ENSOGAG00000001680CPSF39977.761ENSXMAG00000027291CPSF39877.761Xiphophorus_maculatus
ENSOGAG00000001680CPSF39974.780ENSXMAG00000009784cpsf39974.780Xiphophorus_maculatus

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