EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000002045 (Gene tree)
Gene ID: 100942461
Gene Symbol: CMSS1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 22382 bases
Position: chrGL873528.1:38383046-38405427
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000001825	CMS1	PF14617.6	4.4e-34	1	1
ENSOGAP00000001825	DEAD	PF00270.29	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000002047	CMSS1-201	687	-	ENSOGAP00000001825	228 (aa)	-	H0WJX5

Gene Model

Click here to download ENSOGAG00000002045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000002045's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000002045	CMSS1	100	91.667	ENSG00000184220	CMSS1	98	92.500	Homo_sapiens
ENSOGAG00000002045	CMSS1	89	64.851	ENSAPOG00000010604	cmss1	82	64.851	Acanthochromis_polyacanthus
ENSOGAG00000002045	CMSS1	100	92.576	ENSAMEG00000004092	CMSS1	88	92.576	Ailuropoda_melanoleuca
ENSOGAG00000002045	CMSS1	89	54.950	ENSACIG00000021854	cmss1	75	54.950	Amphilophus_citrinellus
ENSOGAG00000002045	CMSS1	89	64.851	ENSAOCG00000013361	cmss1	70	64.851	Amphiprion_ocellaris
ENSOGAG00000002045	CMSS1	89	64.851	ENSAPEG00000005829	cmss1	70	64.851	Amphiprion_percula
ENSOGAG00000002045	CMSS1	99	60.965	ENSATEG00000008209	cmss1	79	60.435	Anabas_testudineus
ENSOGAG00000002045	CMSS1	100	66.376	ENSAPLG00000010542	CMSS1	99	66.376	Anas_platyrhynchos
ENSOGAG00000002045	CMSS1	100	65.086	ENSACAG00000011065	CMSS1	85	65.086	Anolis_carolinensis
ENSOGAG00000002045	CMSS1	100	91.667	ENSANAG00000023565	CMSS1	87	91.667	Aotus_nancymaae
ENSOGAG00000002045	CMSS1	89	61.386	ENSACLG00000027294	cmss1	78	57.269	Astatotilapia_calliptera
ENSOGAG00000002045	CMSS1	88	54.500	ENSAMXG00000002046	cmss1	69	54.950	Astyanax_mexicanus
ENSOGAG00000002045	CMSS1	100	90.351	ENSBTAG00000013663	CMSS1	83	90.351	Bos_taurus
ENSOGAG00000002045	CMSS1	100	91.228	ENSCJAG00000000610	CMSS1	87	91.228	Callithrix_jacchus
ENSOGAG00000002045	CMSS1	100	93.860	ENSCAFG00000009230	CMSS1	83	93.860	Canis_familiaris
ENSOGAG00000002045	CMSS1	95	88.940	ENSCAFG00020024156	-	68	88.940	Canis_lupus_dingo
ENSOGAG00000002045	CMSS1	100	93.860	ENSCAFG00020009464	-	83	93.860	Canis_lupus_dingo
ENSOGAG00000002045	CMSS1	100	89.912	ENSCHIG00000013003	CMSS1	83	89.912	Capra_hircus
ENSOGAG00000002045	CMSS1	100	89.474	ENSTSYG00000009266	CMSS1	88	89.474	Carlito_syrichta
ENSOGAG00000002045	CMSS1	98	72.052	ENSCAPG00000013584	CMSS1	100	71.616	Cavia_aperea
ENSOGAG00000002045	CMSS1	100	90.789	ENSCPOG00000014680	CMSS1	82	90.789	Cavia_porcellus
ENSOGAG00000002045	CMSS1	100	92.105	ENSCCAG00000034685	CMSS1	87	92.105	Cebus_capucinus
ENSOGAG00000002045	CMSS1	100	92.105	ENSCATG00000031980	CMSS1	87	92.105	Cercocebus_atys
ENSOGAG00000002045	CMSS1	100	92.105	ENSCLAG00000011241	CMSS1	98	92.105	Chinchilla_lanigera
ENSOGAG00000002045	CMSS1	100	92.105	ENSCSAG00000006024	CMSS1	93	92.105	Chlorocebus_sabaeus
ENSOGAG00000002045	CMSS1	100	68.860	ENSCHOG00000012098	CMSS1	83	68.860	Choloepus_hoffmanni
ENSOGAG00000002045	CMSS1	86	42.000	ENSCING00000014848	-	100	43.316	Ciona_intestinalis
ENSOGAG00000002045	CMSS1	55	39.683	ENSCSAVG00000002309	-	99	39.683	Ciona_savignyi
ENSOGAG00000002045	CMSS1	100	91.667	ENSCANG00000031337	CMSS1	87	91.667	Colobus_angolensis_palliatus
ENSOGAG00000002045	CMSS1	100	84.649	ENSCGRG00001014305	Cmss1	82	84.649	Cricetulus_griseus_chok1gshd
ENSOGAG00000002045	CMSS1	100	85.088	ENSCGRG00000006722	Cmss1	89	85.088	Cricetulus_griseus_crigri
ENSOGAG00000002045	CMSS1	89	62.871	ENSCSEG00000004958	cmss1	69	62.871	Cynoglossus_semilaevis
ENSOGAG00000002045	CMSS1	89	61.881	ENSCVAG00000005039	cmss1	70	61.881	Cyprinodon_variegatus
ENSOGAG00000002045	CMSS1	99	52.381	ENSDARG00000112579	cmss1	79	51.293	Danio_rerio
ENSOGAG00000002045	CMSS1	100	89.035	ENSDNOG00000040418	CMSS1	83	89.035	Dasypus_novemcinctus
ENSOGAG00000002045	CMSS1	100	89.912	ENSDORG00000010461	Cmss1	82	89.912	Dipodomys_ordii
ENSOGAG00000002045	CMSS1	58	50.000	ENSEBUG00000002156	-	96	50.000	Eptatretus_burgeri
ENSOGAG00000002045	CMSS1	100	92.105	ENSEASG00005010966	CMSS1	99	91.781	Equus_asinus_asinus
ENSOGAG00000002045	CMSS1	100	91.228	ENSECAG00000015662	CMSS1	99	90.708	Equus_caballus
ENSOGAG00000002045	CMSS1	100	62.281	ENSEEUG00000007624	-	82	62.719	Erinaceus_europaeus
ENSOGAG00000002045	CMSS1	89	61.881	ENSELUG00000019459	cmss1	75	59.292	Esox_lucius
ENSOGAG00000002045	CMSS1	100	94.298	ENSFCAG00000044577	CMSS1	82	94.298	Felis_catus
ENSOGAG00000002045	CMSS1	100	65.351	ENSFALG00000005816	CMSS1	96	65.351	Ficedula_albicollis
ENSOGAG00000002045	CMSS1	100	90.789	ENSFDAG00000012577	CMSS1	100	90.789	Fukomys_damarensis
ENSOGAG00000002045	CMSS1	99	60.606	ENSFHEG00000012008	cmss1	95	60.606	Fundulus_heteroclitus
ENSOGAG00000002045	CMSS1	89	62.376	ENSGMOG00000016729	cmss1	72	62.376	Gadus_morhua
ENSOGAG00000002045	CMSS1	100	67.544	ENSGALG00000015267	CMSS1	87	67.544	Gallus_gallus
ENSOGAG00000002045	CMSS1	91	64.251	ENSGAFG00000021217	cmss1	77	64.356	Gambusia_affinis
ENSOGAG00000002045	CMSS1	89	55.941	ENSGACG00000002798	cmss1	72	55.941	Gasterosteus_aculeatus
ENSOGAG00000002045	CMSS1	100	69.298	ENSGAGG00000019861	CMSS1	89	69.298	Gopherus_agassizii
ENSOGAG00000002045	CMSS1	100	92.105	ENSGGOG00000014125	CMSS1	87	92.105	Gorilla_gorilla
ENSOGAG00000002045	CMSS1	89	61.386	ENSHBUG00000008431	cmss1	80	57.269	Haplochromis_burtoni
ENSOGAG00000002045	CMSS1	99	91.189	ENSHGLG00000019481	CMSS1	93	91.189	Heterocephalus_glaber_female
ENSOGAG00000002045	CMSS1	99	91.189	ENSHGLG00100010314	CMSS1	91	91.189	Heterocephalus_glaber_male
ENSOGAG00000002045	CMSS1	96	64.840	ENSHCOG00000003222	cmss1	74	64.840	Hippocampus_comes
ENSOGAG00000002045	CMSS1	96	56.364	ENSIPUG00000011591	cmss1	76	56.364	Ictalurus_punctatus
ENSOGAG00000002045	CMSS1	100	92.105	ENSSTOG00000019366	CMSS1	82	92.105	Ictidomys_tridecemlineatus
ENSOGAG00000002045	CMSS1	100	89.035	ENSJJAG00000014894	Cmss1	90	91.584	Jaculus_jaculus
ENSOGAG00000002045	CMSS1	89	54.950	ENSKMAG00000002390	cmss1	81	54.455	Kryptolebias_marmoratus
ENSOGAG00000002045	CMSS1	89	58.621	ENSLBEG00000006298	cmss1	83	58.621	Labrus_bergylta
ENSOGAG00000002045	CMSS1	100	65.217	ENSLACG00000009293	CMSS1	100	65.652	Latimeria_chalumnae
ENSOGAG00000002045	CMSS1	99	57.269	ENSLOCG00000009391	cmss1	80	57.269	Lepisosteus_oculatus
ENSOGAG00000002045	CMSS1	100	89.474	ENSLAFG00000017509	CMSS1	100	89.474	Loxodonta_africana
ENSOGAG00000002045	CMSS1	100	92.544	ENSMFAG00000045006	CMSS1	87	92.544	Macaca_fascicularis
ENSOGAG00000002045	CMSS1	100	92.105	ENSMMUG00000002939	CMSS1	97	91.743	Macaca_mulatta
ENSOGAG00000002045	CMSS1	100	92.105	ENSMNEG00000031315	CMSS1	87	92.105	Macaca_nemestrina
ENSOGAG00000002045	CMSS1	100	91.667	ENSMLEG00000033660	CMSS1	87	91.667	Mandrillus_leucophaeus
ENSOGAG00000002045	CMSS1	89	63.861	ENSMAMG00000017176	cmss1	70	63.861	Mastacembelus_armatus
ENSOGAG00000002045	CMSS1	89	61.386	ENSMZEG00005021886	cmss1	78	57.269	Maylandia_zebra
ENSOGAG00000002045	CMSS1	100	66.667	ENSMGAG00000014360	CMSS1	100	66.667	Meleagris_gallopavo
ENSOGAG00000002045	CMSS1	100	57.456	ENSMAUG00000020609	Cmss1	78	57.456	Mesocricetus_auratus
ENSOGAG00000002045	CMSS1	100	95.614	ENSMICG00000048977	CMSS1	88	95.614	Microcebus_murinus
ENSOGAG00000002045	CMSS1	100	82.895	ENSMOCG00000021937	Cmss1	83	82.895	Microtus_ochrogaster
ENSOGAG00000002045	CMSS1	89	61.386	ENSMMOG00000019794	cmss1	84	61.386	Mola_mola
ENSOGAG00000002045	CMSS1	100	77.632	ENSMODG00000002275	CMSS1	86	77.632	Monodelphis_domestica
ENSOGAG00000002045	CMSS1	89	64.356	ENSMALG00000004250	cmss1	69	64.356	Monopterus_albus
ENSOGAG00000002045	CMSS1	100	82.969	MGP_CAROLIEiJ_G0020824	Cmss1	83	82.969	Mus_caroli
ENSOGAG00000002045	CMSS1	100	84.279	ENSMUSG00000022748	Cmss1	83	84.279	Mus_musculus
ENSOGAG00000002045	CMSS1	100	83.843	MGP_PahariEiJ_G0016524	Cmss1	83	83.843	Mus_pahari
ENSOGAG00000002045	CMSS1	100	84.279	MGP_SPRETEiJ_G0021724	Cmss1	83	84.279	Mus_spretus
ENSOGAG00000002045	CMSS1	99	94.273	ENSMPUG00000011324	CMSS1	88	94.273	Mustela_putorius_furo
ENSOGAG00000002045	CMSS1	100	91.304	ENSMLUG00000001131	CMSS1	87	91.304	Myotis_lucifugus
ENSOGAG00000002045	CMSS1	100	88.158	ENSNGAG00000020316	Cmss1	82	88.158	Nannospalax_galili
ENSOGAG00000002045	CMSS1	89	60.891	ENSNBRG00000003095	cmss1	69	60.891	Neolamprologus_brichardi
ENSOGAG00000002045	CMSS1	100	92.544	ENSNLEG00000034172	CMSS1	87	92.544	Nomascus_leucogenys
ENSOGAG00000002045	CMSS1	100	65.351	ENSMEUG00000014505	CMSS1	100	65.351	Notamacropus_eugenii
ENSOGAG00000002045	CMSS1	100	91.228	ENSOPRG00000002986	CMSS1	82	91.228	Ochotona_princeps
ENSOGAG00000002045	CMSS1	96	78.899	ENSODEG00000009446	-	85	78.899	Octodon_degus
ENSOGAG00000002045	CMSS1	100	76.316	ENSODEG00000001853	-	81	76.316	Octodon_degus
ENSOGAG00000002045	CMSS1	100	86.842	ENSODEG00000003558	-	84	86.842	Octodon_degus
ENSOGAG00000002045	CMSS1	100	88.596	ENSODEG00000005226	-	82	88.596	Octodon_degus
ENSOGAG00000002045	CMSS1	97	58.371	ENSONIG00000006678	cmss1	85	58.371	Oreochromis_niloticus
ENSOGAG00000002045	CMSS1	100	74.123	ENSOANG00000007529	CMSS1	99	72.414	Ornithorhynchus_anatinus
ENSOGAG00000002045	CMSS1	100	90.789	ENSOCUG00000025366	CMSS1	83	90.789	Oryctolagus_cuniculus
ENSOGAG00000002045	CMSS1	89	64.356	ENSORLG00000020340	cmss1	71	64.356	Oryzias_latipes
ENSOGAG00000002045	CMSS1	100	55.263	ENSORLG00020012235	cmss1	85	58.416	Oryzias_latipes_hni
ENSOGAG00000002045	CMSS1	89	57.921	ENSORLG00015015551	cmss1	75	57.921	Oryzias_latipes_hsok
ENSOGAG00000002045	CMSS1	89	64.851	ENSOMEG00000012555	cmss1	70	64.851	Oryzias_melastigma
ENSOGAG00000002045	CMSS1	100	89.956	ENSOARG00000017899	CMSS1	79	89.956	Ovis_aries
ENSOGAG00000002045	CMSS1	100	92.105	ENSPPAG00000038515	CMSS1	84	92.105	Pan_paniscus
ENSOGAG00000002045	CMSS1	100	93.421	ENSPPRG00000016767	CMSS1	82	93.421	Panthera_pardus
ENSOGAG00000002045	CMSS1	100	93.421	ENSPTIG00000018274	CMSS1	82	93.421	Panthera_tigris_altaica
ENSOGAG00000002045	CMSS1	100	91.667	ENSPTRG00000015157	CMSS1	93	91.667	Pan_troglodytes
ENSOGAG00000002045	CMSS1	100	92.105	ENSPANG00000019980	CMSS1	91	92.105	Papio_anubis
ENSOGAG00000002045	CMSS1	99	60.870	ENSPKIG00000012609	cmss1	85	61.039	Paramormyrops_kingsleyae
ENSOGAG00000002045	CMSS1	100	71.053	ENSPSIG00000003849	CMSS1	99	71.053	Pelodiscus_sinensis
ENSOGAG00000002045	CMSS1	89	62.562	ENSPMGG00000010286	cmss1	87	62.562	Periophthalmus_magnuspinnatus
ENSOGAG00000002045	CMSS1	100	84.649	ENSPEMG00000016384	Cmss1	81	84.649	Peromyscus_maniculatus_bairdii
ENSOGAG00000002045	CMSS1	89	51.961	ENSPMAG00000001146	cmss1	99	52.475	Petromyzon_marinus
ENSOGAG00000002045	CMSS1	100	76.754	ENSPCIG00000015656	CMSS1	86	76.754	Phascolarctos_cinereus
ENSOGAG00000002045	CMSS1	89	63.861	ENSPFOG00000016849	cmss1	71	63.861	Poecilia_formosa
ENSOGAG00000002045	CMSS1	89	63.366	ENSPLAG00000008323	cmss1	71	63.366	Poecilia_latipinna
ENSOGAG00000002045	CMSS1	89	63.861	ENSPMEG00000021020	cmss1	70	63.861	Poecilia_mexicana
ENSOGAG00000002045	CMSS1	89	63.861	ENSPREG00000007618	cmss1	69	63.861	Poecilia_reticulata
ENSOGAG00000002045	CMSS1	100	91.228	ENSPPYG00000013606	CMSS1	84	91.228	Pongo_abelii
ENSOGAG00000002045	CMSS1	100	95.175	ENSPCOG00000020035	CMSS1	88	95.175	Propithecus_coquereli
ENSOGAG00000002045	CMSS1	100	78.070	ENSPVAG00000017031	CMSS1	82	78.070	Pteropus_vampyrus
ENSOGAG00000002045	CMSS1	77	63.068	ENSPNYG00000013428	cmss1	74	58.209	Pundamilia_nyererei
ENSOGAG00000002045	CMSS1	99	54.545	ENSPNAG00000007912	cmss1	79	55.411	Pygocentrus_nattereri
ENSOGAG00000002045	CMSS1	100	83.406	ENSRNOG00000027888	Cmss1	89	83.406	Rattus_norvegicus
ENSOGAG00000002045	CMSS1	100	91.667	ENSRBIG00000037931	CMSS1	87	91.667	Rhinopithecus_bieti
ENSOGAG00000002045	CMSS1	100	91.667	ENSRROG00000042910	CMSS1	87	91.667	Rhinopithecus_roxellana
ENSOGAG00000002045	CMSS1	100	91.667	ENSSBOG00000030980	CMSS1	87	91.667	Saimiri_boliviensis_boliviensis
ENSOGAG00000002045	CMSS1	100	78.070	ENSSHAG00000009321	CMSS1	90	78.070	Sarcophilus_harrisii
ENSOGAG00000002045	CMSS1	99	60.435	ENSSFOG00015001509	cmss1	80	59.740	Scleropages_formosus
ENSOGAG00000002045	CMSS1	89	63.861	ENSSMAG00000001653	cmss1	69	63.861	Scophthalmus_maximus
ENSOGAG00000002045	CMSS1	99	59.389	ENSSDUG00000007719	cmss1	80	58.952	Seriola_dumerili
ENSOGAG00000002045	CMSS1	91	63.768	ENSSLDG00000012300	cmss1	75	57.778	Seriola_lalandi_dorsalis
ENSOGAG00000002045	CMSS1	100	75.000	ENSSARG00000003584	CMSS1	81	75.000	Sorex_araneus
ENSOGAG00000002045	CMSS1	99	69.027	ENSSPUG00000003865	CMSS1	100	69.027	Sphenodon_punctatus
ENSOGAG00000002045	CMSS1	91	64.251	ENSSPAG00000019182	cmss1	63	64.851	Stegastes_partitus
ENSOGAG00000002045	CMSS1	100	92.105	ENSSSCG00000011970	CMSS1	82	92.105	Sus_scrofa
ENSOGAG00000002045	CMSS1	100	64.912	ENSTGUG00000013635	CMSS1	99	64.912	Taeniopygia_guttata
ENSOGAG00000002045	CMSS1	89	61.386	ENSTRUG00000015265	cmss1	72	61.386	Takifugu_rubripes
ENSOGAG00000002045	CMSS1	89	55.941	ENSTNIG00000002880	cmss1	73	55.941	Tetraodon_nigroviridis
ENSOGAG00000002045	CMSS1	100	67.982	ENSTBEG00000016722	CMSS1	81	67.982	Tupaia_belangeri
ENSOGAG00000002045	CMSS1	100	89.474	ENSTTRG00000001562	CMSS1	81	89.474	Tursiops_truncatus
ENSOGAG00000002045	CMSS1	100	93.421	ENSUAMG00000024209	CMSS1	100	93.274	Ursus_americanus
ENSOGAG00000002045	CMSS1	100	92.544	ENSUMAG00000001983	CMSS1	88	92.544	Ursus_maritimus
ENSOGAG00000002045	CMSS1	100	75.877	ENSVPAG00000000263	CMSS1	82	75.877	Vicugna_pacos
ENSOGAG00000002045	CMSS1	100	93.421	ENSVVUG00000021647	-	93	93.421	Vulpes_vulpes
ENSOGAG00000002045	CMSS1	95	93.548	ENSVVUG00000007776	-	85	93.548	Vulpes_vulpes
ENSOGAG00000002045	CMSS1	96	61.712	ENSXETG00000011858	cmss1	80	61.261	Xenopus_tropicalis
ENSOGAG00000002045	CMSS1	91	63.462	ENSXCOG00000018724	cmss1	69	63.861	Xiphophorus_couchianus
ENSOGAG00000002045	CMSS1	91	63.462	ENSXMAG00000011243	cmss1	76	63.861	Xiphophorus_maculatus