EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000002427 (Gene tree)
Gene ID: 100949558
Gene Symbol: CHD6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 134479 bases
Position: chrGL873542.1:4045973-4180451
Accession: 19057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000002168	ResIII	PF04851.15	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000002430	CHD6-201	8136	-	ENSOGAP00000002168	2711 (aa)	-	H0WKQ0

Gene Model

Click here to download ENSOGAG00000002427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000002427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000002427	CHD6	79	62.364	ENSOGAG00000002110	CHD9	70	63.540
ENSOGAG00000002427	CHD6	73	68.714	ENSOGAG00000013905	CHD7	71	65.639
ENSOGAG00000002427	CHD6	62	61.208	ENSOGAG00000002722	CHD8	62	63.165

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000002427	CHD6	100	91.753	ENSG00000124177	CHD6	99	100.000	Homo_sapiens
ENSOGAG00000002427	CHD6	72	74.655	ENSAPOG00000013736	chd6	67	70.968	Acanthochromis_polyacanthus
ENSOGAG00000002427	CHD6	99	89.948	ENSAMEG00000009496	CHD6	99	90.048	Ailuropoda_melanoleuca
ENSOGAG00000002427	CHD6	72	75.449	ENSATEG00000005608	chd6	62	76.728	Anabas_testudineus
ENSOGAG00000002427	CHD6	68	78.480	ENSAPLG00000015592	CHD6	99	71.340	Anas_platyrhynchos
ENSOGAG00000002427	CHD6	99	67.019	ENSACAG00000006842	CHD6	99	67.079	Anolis_carolinensis
ENSOGAG00000002427	CHD6	100	91.421	ENSANAG00000037548	CHD6	99	93.211	Aotus_nancymaae
ENSOGAG00000002427	CHD6	77	73.561	ENSAMXG00000009576	chd6	74	72.550	Astyanax_mexicanus
ENSOGAG00000002427	CHD6	99	87.164	ENSBTAG00000005733	CHD6	99	87.214	Bos_taurus
ENSOGAG00000002427	CHD6	100	91.605	ENSCJAG00000017920	CHD6	99	93.028	Callithrix_jacchus
ENSOGAG00000002427	CHD6	99	89.948	ENSCAFG00000009236	CHD6	99	90.048	Canis_familiaris
ENSOGAG00000002427	CHD6	99	89.402	ENSCAFG00020012906	CHD6	99	96.309	Canis_lupus_dingo
ENSOGAG00000002427	CHD6	99	87.054	ENSCHIG00000017606	CHD6	99	87.103	Capra_hircus
ENSOGAG00000002427	CHD6	84	91.217	ENSTSYG00000014635	CHD6	100	91.217	Carlito_syrichta
ENSOGAG00000002427	CHD6	100	90.070	ENSCPOG00000015641	CHD6	99	90.270	Cavia_porcellus
ENSOGAG00000002427	CHD6	100	91.568	ENSCCAG00000036828	CHD6	99	93.211	Cebus_capucinus
ENSOGAG00000002427	CHD6	100	91.458	ENSCATG00000039248	CHD6	99	93.211	Cercocebus_atys
ENSOGAG00000002427	CHD6	100	89.578	ENSCLAG00000013743	CHD6	99	89.775	Chinchilla_lanigera
ENSOGAG00000002427	CHD6	100	91.753	ENSCSAG00000013997	CHD6	99	91.963	Chlorocebus_sabaeus
ENSOGAG00000002427	CHD6	91	89.168	ENSCHOG00000012647	CHD6	94	89.340	Choloepus_hoffmanni
ENSOGAG00000002427	CHD6	99	72.202	ENSCPBG00000019382	CHD6	99	72.714	Chrysemys_picta_bellii
ENSOGAG00000002427	CHD6	100	91.605	ENSCANG00000043435	CHD6	99	93.211	Colobus_angolensis_palliatus
ENSOGAG00000002427	CHD6	100	88.006	ENSCGRG00001002694	Chd6	99	88.268	Cricetulus_griseus_chok1gshd
ENSOGAG00000002427	CHD6	82	73.691	ENSDARG00000017244	chd6	75	76.873	Danio_rerio
ENSOGAG00000002427	CHD6	99	88.012	ENSDNOG00000004176	CHD6	99	88.059	Dasypus_novemcinctus
ENSOGAG00000002427	CHD6	99	89.993	ENSEASG00005023433	CHD6	95	97.490	Equus_asinus_asinus
ENSOGAG00000002427	CHD6	99	90.648	ENSECAG00000011761	CHD6	99	90.751	Equus_caballus
ENSOGAG00000002427	CHD6	70	79.740	ENSELUG00000012309	chd6	89	79.740	Esox_lucius
ENSOGAG00000002427	CHD6	99	90.096	ENSFCAG00000003572	CHD6	99	90.159	Felis_catus
ENSOGAG00000002427	CHD6	99	70.629	ENSFALG00000012563	CHD6	98	70.695	Ficedula_albicollis
ENSOGAG00000002427	CHD6	99	90.074	ENSFDAG00000013791	CHD6	99	90.122	Fukomys_damarensis
ENSOGAG00000002427	CHD6	73	69.550	ENSGMOG00000011715	chd6	82	70.671	Gadus_morhua
ENSOGAG00000002427	CHD6	79	69.732	ENSGACG00000000037	chd6	86	69.697	Gasterosteus_aculeatus
ENSOGAG00000002427	CHD6	100	91.753	ENSGGOG00000013123	CHD6	99	93.211	Gorilla_gorilla
ENSOGAG00000002427	CHD6	68	80.357	ENSHBUG00000014701	chd6	60	80.357	Haplochromis_burtoni
ENSOGAG00000002427	CHD6	100	90.478	ENSHGLG00000004548	CHD6	99	90.717	Heterocephalus_glaber_female
ENSOGAG00000002427	CHD6	100	90.478	ENSHGLG00100006401	CHD6	99	90.717	Heterocephalus_glaber_male
ENSOGAG00000002427	CHD6	76	77.770	ENSIPUG00000003692	chd6	75	77.048	Ictalurus_punctatus
ENSOGAG00000002427	CHD6	100	90.474	ENSSTOG00000013382	CHD6	99	90.677	Ictidomys_tridecemlineatus
ENSOGAG00000002427	CHD6	84	76.842	ENSLACG00000010881	CHD6	85	77.136	Latimeria_chalumnae
ENSOGAG00000002427	CHD6	73	80.027	ENSLOCG00000007386	chd6	84	75.289	Lepisosteus_oculatus
ENSOGAG00000002427	CHD6	99	89.989	ENSLAFG00000012144	CHD6	99	90.126	Loxodonta_africana
ENSOGAG00000002427	CHD6	100	91.789	ENSMFAG00000032830	CHD6	99	93.211	Macaca_fascicularis
ENSOGAG00000002427	CHD6	100	91.789	ENSMMUG00000020458	CHD6	99	93.211	Macaca_mulatta
ENSOGAG00000002427	CHD6	100	91.789	ENSMNEG00000040847	CHD6	99	93.211	Macaca_nemestrina
ENSOGAG00000002427	CHD6	99	91.978	ENSMLEG00000031965	CHD6	99	93.211	Mandrillus_leucophaeus
ENSOGAG00000002427	CHD6	75	71.473	ENSMAMG00000013111	chd6	63	74.983	Mastacembelus_armatus
ENSOGAG00000002427	CHD6	99	71.193	ENSMGAG00000001121	CHD6	99	71.675	Meleagris_gallopavo
ENSOGAG00000002427	CHD6	99	93.896	ENSMICG00000016641	CHD6	99	93.921	Microcebus_murinus
ENSOGAG00000002427	CHD6	89	80.223	ENSMODG00000000720	-	99	80.306	Monodelphis_domestica
ENSOGAG00000002427	CHD6	100	86.497	MGP_CAROLIEiJ_G0024604	Chd6	99	94.264	Mus_caroli
ENSOGAG00000002427	CHD6	100	86.718	ENSMUSG00000057133	Chd6	99	94.092	Mus_musculus
ENSOGAG00000002427	CHD6	100	86.608	MGP_PahariEiJ_G0026048	Chd6	99	94.521	Mus_pahari
ENSOGAG00000002427	CHD6	100	86.718	MGP_SPRETEiJ_G0025526	Chd6	99	94.178	Mus_spretus
ENSOGAG00000002427	CHD6	99	88.689	ENSMPUG00000017695	CHD6	99	88.782	Mustela_putorius_furo
ENSOGAG00000002427	CHD6	99	89.543	ENSMLUG00000016247	CHD6	99	89.641	Myotis_lucifugus
ENSOGAG00000002427	CHD6	75	73.238	ENSNBRG00000013839	chd6	78	73.255	Neolamprologus_brichardi
ENSOGAG00000002427	CHD6	99	90.596	ENSNLEG00000006496	CHD6	99	90.593	Nomascus_leucogenys
ENSOGAG00000002427	CHD6	100	86.686	ENSOPRG00000013376	-	99	86.829	Ochotona_princeps
ENSOGAG00000002427	CHD6	81	75.226	ENSONIG00000000393	chd6	82	75.388	Oreochromis_niloticus
ENSOGAG00000002427	CHD6	100	69.779	ENSOANG00000014347	CHD6	99	70.237	Ornithorhynchus_anatinus
ENSOGAG00000002427	CHD6	99	88.770	ENSOCUG00000012394	CHD6	99	88.864	Oryctolagus_cuniculus
ENSOGAG00000002427	CHD6	72	73.550	ENSORLG00020021891	chd6	95	86.172	Oryzias_latipes_hni
ENSOGAG00000002427	CHD6	99	84.737	ENSOARG00000002597	CHD6	99	84.775	Ovis_aries
ENSOGAG00000002427	CHD6	99	90.243	ENSPPRG00000014756	CHD6	99	90.307	Panthera_pardus
ENSOGAG00000002427	CHD6	99	90.133	ENSPTIG00000011094	CHD6	99	90.196	Panthera_tigris_altaica
ENSOGAG00000002427	CHD6	100	91.826	ENSPTRG00000013504	CHD6	99	93.211	Pan_troglodytes
ENSOGAG00000002427	CHD6	100	91.789	ENSPANG00000025554	CHD6	99	93.028	Papio_anubis
ENSOGAG00000002427	CHD6	77	76.197	ENSPKIG00000005578	chd6	79	72.843	Paramormyrops_kingsleyae
ENSOGAG00000002427	CHD6	77	76.278	ENSPMGG00000014877	chd6	88	76.546	Periophthalmus_magnuspinnatus
ENSOGAG00000002427	CHD6	99	79.067	ENSPCIG00000028037	CHD6	99	79.697	Phascolarctos_cinereus
ENSOGAG00000002427	CHD6	76	70.287	ENSPLAG00000003128	chd6	65	73.770	Poecilia_latipinna
ENSOGAG00000002427	CHD6	73	73.770	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSOGAG00000002427	CHD6	100	91.792	ENSPPYG00000011016	CHD6	99	92.003	Pongo_abelii
ENSOGAG00000002427	CHD6	99	93.545	ENSPCOG00000001089	CHD6	99	93.766	Propithecus_coquereli
ENSOGAG00000002427	CHD6	75	74.837	ENSPNYG00000022516	chd6	78	74.529	Pundamilia_nyererei
ENSOGAG00000002427	CHD6	76	75.166	ENSPNAG00000012825	chd6	77	72.514	Pygocentrus_nattereri
ENSOGAG00000002427	CHD6	100	86.019	ENSRNOG00000016744	Chd6	99	86.640	Rattus_norvegicus
ENSOGAG00000002427	CHD6	100	91.311	ENSSBOG00000022089	CHD6	99	93.211	Saimiri_boliviensis_boliviensis
ENSOGAG00000002427	CHD6	99	78.756	ENSSHAG00000017072	CHD6	99	79.446	Sarcophilus_harrisii
ENSOGAG00000002427	CHD6	78	75.992	ENSSFOG00015012920	chd6	77	75.992	Scleropages_formosus
ENSOGAG00000002427	CHD6	58	99.342	ENSSARG00000002615	-	60	99.342	Sorex_araneus
ENSOGAG00000002427	CHD6	99	89.216	ENSSSCG00000007360	CHD6	99	90.004	Sus_scrofa
ENSOGAG00000002427	CHD6	90	79.576	ENSTGUG00000003179	CHD6	93	80.500	Taeniopygia_guttata
ENSOGAG00000002427	CHD6	76	77.231	ENSTNIG00000017487	chd6	88	75.503	Tetraodon_nigroviridis
ENSOGAG00000002427	CHD6	99	86.576	ENSTTRG00000013438	CHD6	99	86.576	Tursiops_truncatus
ENSOGAG00000002427	CHD6	99	88.774	ENSUAMG00000024036	CHD6	95	95.946	Ursus_americanus
ENSOGAG00000002427	CHD6	99	90.174	ENSUMAG00000002017	CHD6	95	95.946	Ursus_maritimus
ENSOGAG00000002427	CHD6	92	89.232	ENSVPAG00000007941	CHD6	93	89.232	Vicugna_pacos
ENSOGAG00000002427	CHD6	99	89.838	ENSVVUG00000029164	CHD6	99	89.937	Vulpes_vulpes
ENSOGAG00000002427	CHD6	99	60.359	ENSXETG00000021445	chd6	99	60.301	Xenopus_tropicalis