EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000003136 (Gene tree)
Gene ID: 100943349
Gene Symbol: R3HDM1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 131137 bases
Position: chrGL873599.1:3699501-3830637
Accession: 100943349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000002808	R3H	PF01424.22	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000003140	R3HDM1-201	3340	-	ENSOGAP00000002808	1096 (aa)	XP_023371610	H0WM65

Gene Model

Click here to download ENSOGAG00000003136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000003136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000003136	R3HDM1	84	53.218	ENSOGAG00000027966	-	95	53.218
ENSOGAG00000003136	R3HDM1	68	47.266	ENSOGAG00000009701	ARPP21	55	53.737
ENSOGAG00000003136	R3HDM1	99	46.298	ENSOGAG00000012055	R3HDM2	100	46.378

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000003136	R3HDM1	100	93.200	ENSG00000048991	R3HDM1	100	93.019	Homo_sapiens
ENSOGAG00000003136	R3HDM1	89	47.830	ENSAPOG00000020850	r3hdm1	97	47.266	Acanthochromis_polyacanthus
ENSOGAG00000003136	R3HDM1	100	94.107	ENSAMEG00000014886	R3HDM1	100	94.107	Ailuropoda_melanoleuca
ENSOGAG00000003136	R3HDM1	89	47.173	ENSAOCG00000005192	r3hdm1	99	46.494	Amphiprion_ocellaris
ENSOGAG00000003136	R3HDM1	89	46.884	ENSAPEG00000016108	r3hdm1	99	46.302	Amphiprion_percula
ENSOGAG00000003136	R3HDM1	89	46.220	ENSATEG00000000232	r3hdm1	99	45.698	Anabas_testudineus
ENSOGAG00000003136	R3HDM1	100	78.752	ENSAPLG00000015231	R3HDM1	100	78.643	Anas_platyrhynchos
ENSOGAG00000003136	R3HDM1	100	75.702	ENSACAG00000001676	R3HDM1	100	76.842	Anolis_carolinensis
ENSOGAG00000003136	R3HDM1	100	93.841	ENSANAG00000035334	R3HDM1	100	93.931	Aotus_nancymaae
ENSOGAG00000003136	R3HDM1	79	50.270	ENSACLG00000027282	r3hdm1	94	49.946	Astatotilapia_calliptera
ENSOGAG00000003136	R3HDM1	93	62.645	ENSAMXG00000003536	r3hdm1	100	62.558	Astyanax_mexicanus
ENSOGAG00000003136	R3HDM1	93	72.289	ENSAMXG00000012861	R3HDM1	100	72.222	Astyanax_mexicanus
ENSOGAG00000003136	R3HDM1	100	90.564	ENSBTAG00000013302	R3HDM1	100	90.388	Bos_taurus
ENSOGAG00000003136	R3HDM1	100	93.829	ENSCJAG00000011718	R3HDM1	100	93.829	Callithrix_jacchus
ENSOGAG00000003136	R3HDM1	100	94.379	ENSCAFG00000005075	R3HDM1	100	94.379	Canis_familiaris
ENSOGAG00000003136	R3HDM1	100	94.288	ENSCAFG00020016119	R3HDM1	100	94.288	Canis_lupus_dingo
ENSOGAG00000003136	R3HDM1	100	93.091	ENSCHIG00000020851	R3HDM1	100	93.091	Capra_hircus
ENSOGAG00000003136	R3HDM1	100	89.367	ENSCPOG00000012784	R3HDM1	100	88.840	Cavia_porcellus
ENSOGAG00000003136	R3HDM1	100	93.472	ENSCCAG00000027199	R3HDM1	100	93.472	Cebus_capucinus
ENSOGAG00000003136	R3HDM1	100	95.948	ENSCATG00000023642	R3HDM1	100	93.200	Cercocebus_atys
ENSOGAG00000003136	R3HDM1	100	89.094	ENSCLAG00000007962	R3HDM1	100	89.037	Chinchilla_lanigera
ENSOGAG00000003136	R3HDM1	100	89.317	ENSCSAG00000016356	R3HDM1	100	90.413	Chlorocebus_sabaeus
ENSOGAG00000003136	R3HDM1	87	82.830	ENSCHOG00000013638	R3HDM1	91	81.456	Choloepus_hoffmanni
ENSOGAG00000003136	R3HDM1	88	80.742	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSOGAG00000003136	R3HDM1	100	93.116	ENSCANG00000034748	R3HDM1	100	93.207	Colobus_angolensis_palliatus
ENSOGAG00000003136	R3HDM1	99	88.614	ENSCGRG00001012357	R3hdm1	97	87.820	Cricetulus_griseus_chok1gshd
ENSOGAG00000003136	R3HDM1	99	91.182	ENSCGRG00000012080	R3hdm1	100	90.365	Cricetulus_griseus_crigri
ENSOGAG00000003136	R3HDM1	89	42.789	ENSCSEG00000008944	r3hdm1	99	43.944	Cynoglossus_semilaevis
ENSOGAG00000003136	R3HDM1	89	47.919	ENSCVAG00000007582	r3hdm1	99	47.864	Cyprinodon_variegatus
ENSOGAG00000003136	R3HDM1	100	89.792	ENSDNOG00000000771	R3HDM1	100	89.792	Dasypus_novemcinctus
ENSOGAG00000003136	R3HDM1	100	81.942	ENSETEG00000013606	R3HDM1	100	82.107	Echinops_telfairi
ENSOGAG00000003136	R3HDM1	61	44.556	ENSEBUG00000014746	arpp21	99	42.708	Eptatretus_burgeri
ENSOGAG00000003136	R3HDM1	100	94.364	ENSEASG00005007392	R3HDM1	100	94.273	Equus_asinus_asinus
ENSOGAG00000003136	R3HDM1	100	95.095	ENSECAG00000019114	R3HDM1	100	95.095	Equus_caballus
ENSOGAG00000003136	R3HDM1	86	92.683	ENSEEUG00000012589	R3HDM1	86	92.683	Erinaceus_europaeus
ENSOGAG00000003136	R3HDM1	94	55.514	ENSELUG00000004909	R3HDM1	99	55.295	Esox_lucius
ENSOGAG00000003136	R3HDM1	93	50.540	ENSELUG00000014413	r3hdm1	100	51.028	Esox_lucius
ENSOGAG00000003136	R3HDM1	100	94.273	ENSFCAG00000027113	R3HDM1	100	94.273	Felis_catus
ENSOGAG00000003136	R3HDM1	74	72.780	ENSFALG00000013731	R3HDM1	72	73.014	Ficedula_albicollis
ENSOGAG00000003136	R3HDM1	100	89.279	ENSFDAG00000016478	R3HDM1	99	95.018	Fukomys_damarensis
ENSOGAG00000003136	R3HDM1	89	46.240	ENSFHEG00000018713	r3hdm1	99	46.024	Fundulus_heteroclitus
ENSOGAG00000003136	R3HDM1	58	64.783	ENSGMOG00000006042	-	74	64.783	Gadus_morhua
ENSOGAG00000003136	R3HDM1	83	85.621	ENSGALG00000012246	R3HDM1	99	85.574	Gallus_gallus
ENSOGAG00000003136	R3HDM1	79	49.516	ENSGAFG00000006203	r3hdm1	94	49.729	Gambusia_affinis
ENSOGAG00000003136	R3HDM1	87	47.818	ENSGACG00000014925	r3hdm1	99	47.429	Gasterosteus_aculeatus
ENSOGAG00000003136	R3HDM1	100	78.261	ENSGAGG00000007840	R3HDM1	100	77.516	Gopherus_agassizii
ENSOGAG00000003136	R3HDM1	100	92.838	ENSGGOG00000008156	R3HDM1	100	92.656	Gorilla_gorilla
ENSOGAG00000003136	R3HDM1	100	89.859	ENSHGLG00000015718	R3HDM1	99	94.834	Heterocephalus_glaber_female
ENSOGAG00000003136	R3HDM1	100	89.594	ENSHGLG00100003184	-	100	89.594	Heterocephalus_glaber_male
ENSOGAG00000003136	R3HDM1	100	69.482	ENSHGLG00100015374	-	100	69.119	Heterocephalus_glaber_male
ENSOGAG00000003136	R3HDM1	79	44.994	ENSHCOG00000013366	r3hdm1	88	60.000	Hippocampus_comes
ENSOGAG00000003136	R3HDM1	85	66.967	ENSIPUG00000013629	r3hdm1	95	52.220	Ictalurus_punctatus
ENSOGAG00000003136	R3HDM1	81	65.947	ENSIPUG00000001676	R3HDM1	99	65.865	Ictalurus_punctatus
ENSOGAG00000003136	R3HDM1	100	93.654	ENSSTOG00000007572	R3HDM1	99	96.679	Ictidomys_tridecemlineatus
ENSOGAG00000003136	R3HDM1	95	70.663	ENSLACG00000005334	R3HDM1	100	70.545	Latimeria_chalumnae
ENSOGAG00000003136	R3HDM1	100	66.103	ENSLOCG00000001641	r3hdm1	100	65.806	Lepisosteus_oculatus
ENSOGAG00000003136	R3HDM1	100	90.485	ENSLAFG00000009065	R3HDM1	100	90.396	Loxodonta_africana
ENSOGAG00000003136	R3HDM1	100	93.382	ENSMFAG00000030331	R3HDM1	100	97.044	Macaca_fascicularis
ENSOGAG00000003136	R3HDM1	100	93.200	ENSMMUG00000009844	R3HDM1	100	93.200	Macaca_mulatta
ENSOGAG00000003136	R3HDM1	100	93.200	ENSMNEG00000027793	R3HDM1	100	97.044	Macaca_nemestrina
ENSOGAG00000003136	R3HDM1	100	93.472	ENSMLEG00000043189	R3HDM1	100	93.472	Mandrillus_leucophaeus
ENSOGAG00000003136	R3HDM1	89	48.846	ENSMAMG00000004532	r3hdm1	93	55.385	Mastacembelus_armatus
ENSOGAG00000003136	R3HDM1	89	49.082	ENSMZEG00005003157	r3hdm1	99	48.696	Maylandia_zebra
ENSOGAG00000003136	R3HDM1	100	78.009	ENSMGAG00000012461	R3HDM1	100	77.899	Meleagris_gallopavo
ENSOGAG00000003136	R3HDM1	100	88.070	ENSMAUG00000010315	R3hdm1	100	90.698	Mesocricetus_auratus
ENSOGAG00000003136	R3HDM1	96	70.332	ENSMICG00000042655	-	100	89.735	Microcebus_murinus
ENSOGAG00000003136	R3HDM1	100	93.756	ENSMICG00000005900	-	100	93.756	Microcebus_murinus
ENSOGAG00000003136	R3HDM1	90	77.831	ENSMODG00000000923	R3HDM1	97	77.598	Monodelphis_domestica
ENSOGAG00000003136	R3HDM1	99	46.701	ENSMALG00000009000	r3hdm1	99	46.702	Monopterus_albus
ENSOGAG00000003136	R3HDM1	100	87.753	MGP_CAROLIEiJ_G0014543	R3hdm1	99	93.358	Mus_caroli
ENSOGAG00000003136	R3HDM1	100	87.753	ENSMUSG00000056211	R3hdm1	99	93.358	Mus_musculus
ENSOGAG00000003136	R3HDM1	100	87.753	MGP_PahariEiJ_G0027779	R3hdm1	99	92.804	Mus_pahari
ENSOGAG00000003136	R3HDM1	100	87.930	MGP_SPRETEiJ_G0015350	R3hdm1	99	93.542	Mus_spretus
ENSOGAG00000003136	R3HDM1	100	95.005	ENSMPUG00000002412	R3HDM1	100	95.005	Mustela_putorius_furo
ENSOGAG00000003136	R3HDM1	100	93.128	ENSMLUG00000013824	R3HDM1	100	92.224	Myotis_lucifugus
ENSOGAG00000003136	R3HDM1	100	93.291	ENSNLEG00000008622	R3HDM1	100	93.291	Nomascus_leucogenys
ENSOGAG00000003136	R3HDM1	84	79.352	ENSMEUG00000011784	R3HDM1	95	78.543	Notamacropus_eugenii
ENSOGAG00000003136	R3HDM1	100	87.500	ENSODEG00000008607	R3HDM1	100	90.365	Octodon_degus
ENSOGAG00000003136	R3HDM1	95	48.600	ENSONIG00000012017	r3hdm1	98	48.292	Oreochromis_niloticus
ENSOGAG00000003136	R3HDM1	100	80.741	ENSOANG00000007987	R3HDM1	100	80.832	Ornithorhynchus_anatinus
ENSOGAG00000003136	R3HDM1	89	92.175	ENSOCUG00000017366	R3HDM1	98	92.276	Oryctolagus_cuniculus
ENSOGAG00000003136	R3HDM1	89	44.882	ENSORLG00000004297	r3hdm1	94	47.697	Oryzias_latipes
ENSOGAG00000003136	R3HDM1	89	46.550	ENSORLG00015017355	r3hdm1	99	47.192	Oryzias_latipes_hsok
ENSOGAG00000003136	R3HDM1	100	92.818	ENSOARG00000010788	R3HDM1	100	92.909	Ovis_aries
ENSOGAG00000003136	R3HDM1	100	93.122	ENSPPAG00000027858	R3HDM1	100	93.032	Pan_paniscus
ENSOGAG00000003136	R3HDM1	100	94.091	ENSPPRG00000002626	R3HDM1	100	94.091	Panthera_pardus
ENSOGAG00000003136	R3HDM1	100	94.182	ENSPTIG00000016581	R3HDM1	100	94.182	Panthera_tigris_altaica
ENSOGAG00000003136	R3HDM1	100	93.032	ENSPTRG00000012494	R3HDM1	100	92.941	Pan_troglodytes
ENSOGAG00000003136	R3HDM1	100	93.382	ENSPANG00000026448	R3HDM1	100	93.382	Papio_anubis
ENSOGAG00000003136	R3HDM1	84	76.266	ENSPKIG00000004328	r3hdm1	96	55.826	Paramormyrops_kingsleyae
ENSOGAG00000003136	R3HDM1	100	78.332	ENSPSIG00000012915	R3HDM1	100	78.604	Pelodiscus_sinensis
ENSOGAG00000003136	R3HDM1	100	88.546	ENSPEMG00000015187	R3hdm1	100	90.365	Peromyscus_maniculatus_bairdii
ENSOGAG00000003136	R3HDM1	88	43.524	ENSPMAG00000003369	-	98	43.474	Petromyzon_marinus
ENSOGAG00000003136	R3HDM1	100	83.921	ENSPCIG00000002491	R3HDM1	100	83.830	Phascolarctos_cinereus
ENSOGAG00000003136	R3HDM1	89	46.561	ENSPFOG00000015036	r3hdm1	99	46.542	Poecilia_formosa
ENSOGAG00000003136	R3HDM1	79	49.622	ENSPLAG00000018042	r3hdm1	94	49.455	Poecilia_latipinna
ENSOGAG00000003136	R3HDM1	79	49.892	ENSPMEG00000023947	r3hdm1	94	49.619	Poecilia_mexicana
ENSOGAG00000003136	R3HDM1	89	48.312	ENSPREG00000007902	r3hdm1	88	62.470	Poecilia_reticulata
ENSOGAG00000003136	R3HDM1	100	92.482	ENSPPYG00000012815	R3HDM1	100	92.391	Pongo_abelii
ENSOGAG00000003136	R3HDM1	95	91.281	ENSPCAG00000006208	R3HDM1	95	91.281	Procavia_capensis
ENSOGAG00000003136	R3HDM1	100	92.203	ENSPCOG00000012698	R3HDM1	99	99.259	Propithecus_coquereli
ENSOGAG00000003136	R3HDM1	100	84.253	ENSPVAG00000006098	R3HDM1	100	84.344	Pteropus_vampyrus
ENSOGAG00000003136	R3HDM1	93	64.252	ENSPNAG00000013952	r3hdm1	100	64.169	Pygocentrus_nattereri
ENSOGAG00000003136	R3HDM1	83	76.603	ENSPNAG00000005436	R3HDM1	99	76.527	Pygocentrus_nattereri
ENSOGAG00000003136	R3HDM1	66	37.863	ENSPNAG00000004162	arpp21	63	43.992	Pygocentrus_nattereri
ENSOGAG00000003136	R3HDM1	100	87.654	ENSRNOG00000004099	R3hdm1	100	87.202	Rattus_norvegicus
ENSOGAG00000003136	R3HDM1	100	92.036	ENSRBIG00000033317	R3HDM1	100	99.631	Rhinopithecus_bieti
ENSOGAG00000003136	R3HDM1	100	93.207	ENSRROG00000034534	R3HDM1	100	93.297	Rhinopithecus_roxellana
ENSOGAG00000003136	R3HDM1	100	93.200	ENSSBOG00000020389	R3HDM1	100	93.200	Saimiri_boliviensis_boliviensis
ENSOGAG00000003136	R3HDM1	100	84.211	ENSSHAG00000016999	R3HDM1	100	84.120	Sarcophilus_harrisii
ENSOGAG00000003136	R3HDM1	93	71.046	ENSSFOG00015014134	r3hdm1	100	70.976	Scleropages_formosus
ENSOGAG00000003136	R3HDM1	100	56.406	ENSSFOG00015019851	-	100	55.861	Scleropages_formosus
ENSOGAG00000003136	R3HDM1	99	45.086	ENSSMAG00000001669	r3hdm1	99	44.166	Scophthalmus_maximus
ENSOGAG00000003136	R3HDM1	89	48.187	ENSSDUG00000010749	r3hdm1	99	48.084	Seriola_dumerili
ENSOGAG00000003136	R3HDM1	99	47.743	ENSSLDG00000004499	r3hdm1	99	47.781	Seriola_lalandi_dorsalis
ENSOGAG00000003136	R3HDM1	69	81.395	ENSSARG00000000352	-	69	81.395	Sorex_araneus
ENSOGAG00000003136	R3HDM1	100	79.620	ENSSPUG00000004167	R3HDM1	100	79.710	Sphenodon_punctatus
ENSOGAG00000003136	R3HDM1	89	49.714	ENSSPAG00000004648	r3hdm1	99	50.000	Stegastes_partitus
ENSOGAG00000003136	R3HDM1	100	94.732	ENSSSCG00000015692	R3HDM1	100	94.732	Sus_scrofa
ENSOGAG00000003136	R3HDM1	100	73.532	ENSTGUG00000011750	R3HDM1	100	73.442	Taeniopygia_guttata
ENSOGAG00000003136	R3HDM1	79	47.368	ENSTRUG00000011654	r3hdm1	93	46.659	Takifugu_rubripes
ENSOGAG00000003136	R3HDM1	87	46.224	ENSTNIG00000010362	r3hdm1	95	46.292	Tetraodon_nigroviridis
ENSOGAG00000003136	R3HDM1	100	87.091	ENSTTRG00000003935	R3HDM1	100	87.091	Tursiops_truncatus
ENSOGAG00000003136	R3HDM1	70	94.452	ENSUAMG00000024806	R3HDM1	99	94.649	Ursus_americanus
ENSOGAG00000003136	R3HDM1	100	90.372	ENSUMAG00000005552	R3HDM1	100	91.340	Ursus_maritimus
ENSOGAG00000003136	R3HDM1	93	89.762	ENSVPAG00000007333	R3HDM1	93	89.130	Vicugna_pacos
ENSOGAG00000003136	R3HDM1	100	91.542	ENSVVUG00000006457	R3HDM1	100	91.542	Vulpes_vulpes
ENSOGAG00000003136	R3HDM1	89	67.003	ENSXETG00000019330	r3hdm1	100	67.003	Xenopus_tropicalis
ENSOGAG00000003136	R3HDM1	67	50.576	ENSXCOG00000017448	r3hdm1	94	50.259	Xiphophorus_couchianus
ENSOGAG00000003136	R3HDM1	89	46.723	ENSXMAG00000007885	r3hdm1	99	45.736	Xiphophorus_maculatus