EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000003216 (Gene tree)
Gene ID: 100961224
Gene Symbol: CHD3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 22748 bases
Position: chrGL873565.1:11378550-11401297
Accession: 100961224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000002873	ResIII	PF04851.15	7.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000003220	CHD3-201	6865	XM_023513955	ENSOGAP00000002873	1970 (aa)	XP_023369723	H0WMB8

Gene Model

Click here to download ENSOGAG00000003216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000003216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000003216	CHD3	91	70.103	ENSOGAG00000010031	-	95	68.877
ENSOGAG00000003216	CHD3	93	68.094	ENSOGAG00000005703	CHD5	93	69.078

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000003216	CHD3	100	98.528	ENSG00000170004	CHD3	98	98.528	Homo_sapiens
ENSOGAG00000003216	CHD3	80	80.208	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSOGAG00000003216	CHD3	69	97.141	ENSAMEG00000003025	-	100	97.141	Ailuropoda_melanoleuca
ENSOGAG00000003216	CHD3	81	87.791	ENSACIG00000019671	chd3	98	87.791	Amphilophus_citrinellus
ENSOGAG00000003216	CHD3	80	80.888	ENSAOCG00000023784	chd3	97	81.675	Amphiprion_ocellaris
ENSOGAG00000003216	CHD3	76	77.756	ENSAPEG00000006341	chd3	96	73.596	Amphiprion_percula
ENSOGAG00000003216	CHD3	98	73.035	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSOGAG00000003216	CHD3	98	84.833	ENSACAG00000004276	CHD3	95	84.192	Anolis_carolinensis
ENSOGAG00000003216	CHD3	100	95.533	ENSANAG00000034323	CHD3	99	98.295	Aotus_nancymaae
ENSOGAG00000003216	CHD3	92	80.707	ENSACLG00000009222	chd3	99	73.546	Astatotilapia_calliptera
ENSOGAG00000003216	CHD3	99	97.664	ENSBTAG00000014377	CHD3	97	97.708	Bos_taurus
ENSOGAG00000003216	CHD3	100	98.376	ENSCJAG00000014766	CHD3	98	98.376	Callithrix_jacchus
ENSOGAG00000003216	CHD3	99	98.018	ENSCAFG00000016859	CHD3	98	98.018	Canis_familiaris
ENSOGAG00000003216	CHD3	95	97.869	ENSCAFG00020007422	CHD3	100	97.981	Canis_lupus_dingo
ENSOGAG00000003216	CHD3	99	97.815	ENSCHIG00000016737	CHD3	99	97.815	Capra_hircus
ENSOGAG00000003216	CHD3	100	98.426	ENSTSYG00000035658	CHD3	98	98.426	Carlito_syrichta
ENSOGAG00000003216	CHD3	99	94.972	ENSCAPG00000014864	CHD3	98	94.972	Cavia_aperea
ENSOGAG00000003216	CHD3	99	97.511	ENSCPOG00000022653	CHD3	98	97.511	Cavia_porcellus
ENSOGAG00000003216	CHD3	100	98.274	ENSCCAG00000034792	CHD3	98	98.274	Cebus_capucinus
ENSOGAG00000003216	CHD3	100	98.274	ENSCATG00000041717	CHD3	98	98.274	Cercocebus_atys
ENSOGAG00000003216	CHD3	99	98.017	ENSCLAG00000010523	CHD3	100	98.017	Chinchilla_lanigera
ENSOGAG00000003216	CHD3	100	98.071	ENSCSAG00000011122	CHD3	100	98.071	Chlorocebus_sabaeus
ENSOGAG00000003216	CHD3	90	83.305	ENSCPBG00000011966	CHD3	99	86.420	Chrysemys_picta_bellii
ENSOGAG00000003216	CHD3	100	98.223	ENSCANG00000037641	CHD3	98	98.223	Colobus_angolensis_palliatus
ENSOGAG00000003216	CHD3	99	96.697	ENSCGRG00001011306	Chd3	100	96.697	Cricetulus_griseus_chok1gshd
ENSOGAG00000003216	CHD3	94	97.059	ENSCGRG00000007878	Chd3	99	97.059	Cricetulus_griseus_crigri
ENSOGAG00000003216	CHD3	91	79.276	ENSCSEG00000004489	chd3	99	76.288	Cynoglossus_semilaevis
ENSOGAG00000003216	CHD3	87	82.072	ENSCVAG00000007293	chd3	95	82.072	Cyprinodon_variegatus
ENSOGAG00000003216	CHD3	89	82.215	ENSDARG00000021405	chd3	99	75.458	Danio_rerio
ENSOGAG00000003216	CHD3	99	83.165	ENSDNOG00000047846	CHD3	98	82.609	Dasypus_novemcinctus
ENSOGAG00000003216	CHD3	99	97.153	ENSDORG00000010713	Chd3	100	97.153	Dipodomys_ordii
ENSOGAG00000003216	CHD3	98	91.437	ENSETEG00000017733	CHD3	100	91.437	Echinops_telfairi
ENSOGAG00000003216	CHD3	54	77.666	ENSEBUG00000008310	chd3	99	70.160	Eptatretus_burgeri
ENSOGAG00000003216	CHD3	93	97.927	ENSEASG00005019360	CHD3	100	97.927	Equus_asinus_asinus
ENSOGAG00000003216	CHD3	93	97.981	ENSECAG00000010051	CHD3	100	97.981	Equus_caballus
ENSOGAG00000003216	CHD3	93	98.305	ENSEEUG00000015205	CHD3	93	98.305	Erinaceus_europaeus
ENSOGAG00000003216	CHD3	80	77.101	ENSELUG00000019499	chd3	99	77.311	Esox_lucius
ENSOGAG00000003216	CHD3	99	97.764	ENSFCAG00000009629	CHD3	96	97.764	Felis_catus
ENSOGAG00000003216	CHD3	99	95.325	ENSFDAG00000008220	CHD3	99	95.681	Fukomys_damarensis
ENSOGAG00000003216	CHD3	88	80.406	ENSGMOG00000013599	chd3	91	81.015	Gadus_morhua
ENSOGAG00000003216	CHD3	59	74.744	ENSGAFG00000004055	chd3	99	76.496	Gambusia_affinis
ENSOGAG00000003216	CHD3	98	70.690	ENSGACG00000019275	chd3	100	70.796	Gasterosteus_aculeatus
ENSOGAG00000003216	CHD3	76	85.333	ENSGAGG00000013164	CHD3	99	85.704	Gopherus_agassizii
ENSOGAG00000003216	CHD3	100	98.376	ENSGGOG00000013496	CHD3	98	98.376	Gorilla_gorilla
ENSOGAG00000003216	CHD3	99	97.967	ENSHGLG00000012017	CHD3	99	97.967	Heterocephalus_glaber_female
ENSOGAG00000003216	CHD3	89	91.159	ENSHGLG00100013902	CHD3	99	91.159	Heterocephalus_glaber_male
ENSOGAG00000003216	CHD3	94	73.041	ENSHCOG00000010170	chd3	96	73.398	Hippocampus_comes
ENSOGAG00000003216	CHD3	84	80.353	ENSIPUG00000003271	chd3	93	80.919	Ictalurus_punctatus
ENSOGAG00000003216	CHD3	100	97.919	ENSSTOG00000025907	CHD3	100	97.919	Ictidomys_tridecemlineatus
ENSOGAG00000003216	CHD3	99	96.799	ENSJJAG00000017633	Chd3	100	96.797	Jaculus_jaculus
ENSOGAG00000003216	CHD3	86	90.047	ENSKMAG00000019292	chd3	97	74.576	Kryptolebias_marmoratus
ENSOGAG00000003216	CHD3	87	87.826	ENSLBEG00000028485	chd3	91	87.826	Labrus_bergylta
ENSOGAG00000003216	CHD3	97	74.358	ENSLACG00000008031	CHD3	98	73.794	Latimeria_chalumnae
ENSOGAG00000003216	CHD3	98	76.830	ENSLOCG00000013965	chd3	97	77.089	Lepisosteus_oculatus
ENSOGAG00000003216	CHD3	96	93.853	ENSLAFG00000000572	CHD3	100	93.853	Loxodonta_africana
ENSOGAG00000003216	CHD3	100	98.325	ENSMFAG00000020113	CHD3	98	98.325	Macaca_fascicularis
ENSOGAG00000003216	CHD3	100	95.939	ENSMMUG00000022221	CHD3	99	95.390	Macaca_mulatta
ENSOGAG00000003216	CHD3	100	98.223	ENSMNEG00000001728	CHD3	99	97.652	Macaca_nemestrina
ENSOGAG00000003216	CHD3	100	98.274	ENSMLEG00000032249	CHD3	98	98.274	Mandrillus_leucophaeus
ENSOGAG00000003216	CHD3	86	75.731	ENSMAMG00000000564	chd3	99	76.171	Mastacembelus_armatus
ENSOGAG00000003216	CHD3	100	95.992	ENSMAUG00000013873	Chd3	99	93.822	Mesocricetus_auratus
ENSOGAG00000003216	CHD3	99	98.780	ENSMICG00000008741	CHD3	99	96.148	Microcebus_murinus
ENSOGAG00000003216	CHD3	99	96.843	ENSMOCG00000004848	Chd3	100	96.843	Microtus_ochrogaster
ENSOGAG00000003216	CHD3	96	74.088	ENSMMOG00000012699	chd3	99	73.474	Mola_mola
ENSOGAG00000003216	CHD3	93	92.203	ENSMODG00000007509	CHD3	100	92.203	Monodelphis_domestica
ENSOGAG00000003216	CHD3	99	96.601	MGP_CAROLIEiJ_G0016564	Chd3	100	95.156	Mus_caroli
ENSOGAG00000003216	CHD3	99	96.651	ENSMUSG00000018474	Chd3	99	95.208	Mus_musculus
ENSOGAG00000003216	CHD3	99	96.701	MGP_PahariEiJ_G0017695	Chd3	100	95.258	Mus_pahari
ENSOGAG00000003216	CHD3	99	96.651	MGP_SPRETEiJ_G0017400	Chd3	100	95.208	Mus_spretus
ENSOGAG00000003216	CHD3	87	97.783	ENSMPUG00000008861	CHD3	100	97.783	Mustela_putorius_furo
ENSOGAG00000003216	CHD3	99	96.701	ENSMLUG00000014643	-	98	96.701	Myotis_lucifugus
ENSOGAG00000003216	CHD3	99	97.154	ENSNGAG00000000773	Chd3	98	97.154	Nannospalax_galili
ENSOGAG00000003216	CHD3	86	75.587	ENSNBRG00000000636	chd3	97	76.056	Neolamprologus_brichardi
ENSOGAG00000003216	CHD3	99	94.382	ENSNLEG00000009770	CHD3	100	95.174	Nomascus_leucogenys
ENSOGAG00000003216	CHD3	86	91.209	ENSMEUG00000005852	CHD3	87	91.209	Notamacropus_eugenii
ENSOGAG00000003216	CHD3	95	96.156	ENSOPRG00000011069	CHD3	100	96.156	Ochotona_princeps
ENSOGAG00000003216	CHD3	99	97.664	ENSODEG00000017785	CHD3	99	97.664	Octodon_degus
ENSOGAG00000003216	CHD3	76	78.026	ENSONIG00000009292	chd3	100	74.681	Oreochromis_niloticus
ENSOGAG00000003216	CHD3	99	92.981	ENSOCUG00000029299	CHD3	100	92.883	Oryctolagus_cuniculus
ENSOGAG00000003216	CHD3	83	70.326	ENSORLG00000007107	chd3	93	70.688	Oryzias_latipes
ENSOGAG00000003216	CHD3	57	73.192	ENSORLG00020008387	chd3	95	73.786	Oryzias_latipes_hni
ENSOGAG00000003216	CHD3	71	80.171	ENSOMEG00000013691	chd3	99	77.175	Oryzias_melastigma
ENSOGAG00000003216	CHD3	99	95.434	ENSOARG00000017855	CHD3	99	95.434	Ovis_aries
ENSOGAG00000003216	CHD3	100	96.148	ENSPPAG00000032886	CHD3	98	96.148	Pan_paniscus
ENSOGAG00000003216	CHD3	99	97.917	ENSPPRG00000000626	CHD3	98	97.917	Panthera_pardus
ENSOGAG00000003216	CHD3	100	98.579	ENSPTRG00000008714	CHD3	98	98.579	Pan_troglodytes
ENSOGAG00000003216	CHD3	100	98.274	ENSPANG00000023938	CHD3	98	98.274	Papio_anubis
ENSOGAG00000003216	CHD3	99	75.224	ENSPKIG00000006305	chd3	99	79.102	Paramormyrops_kingsleyae
ENSOGAG00000003216	CHD3	55	89.964	ENSPSIG00000010177	CHD3	98	90.237	Pelodiscus_sinensis
ENSOGAG00000003216	CHD3	99	96.697	ENSPEMG00000014262	Chd3	99	96.697	Peromyscus_maniculatus_bairdii
ENSOGAG00000003216	CHD3	99	92.433	ENSPCIG00000005442	CHD3	97	95.122	Phascolarctos_cinereus
ENSOGAG00000003216	CHD3	76	76.913	ENSPFOG00000012464	chd3	92	73.983	Poecilia_formosa
ENSOGAG00000003216	CHD3	87	83.806	ENSPLAG00000002887	chd3	96	83.806	Poecilia_latipinna
ENSOGAG00000003216	CHD3	53	81.374	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSOGAG00000003216	CHD3	90	84.133	ENSPREG00000011044	chd3	99	79.301	Poecilia_reticulata
ENSOGAG00000003216	CHD3	98	95.440	ENSPPYG00000007940	CHD3	98	95.440	Pongo_abelii
ENSOGAG00000003216	CHD3	96	97.502	ENSPCAG00000004350	CHD3	96	97.502	Procavia_capensis
ENSOGAG00000003216	CHD3	99	98.679	ENSPCOG00000020952	CHD3	99	98.629	Propithecus_coquereli
ENSOGAG00000003216	CHD3	87	96.956	ENSPVAG00000016344	CHD3	87	96.956	Pteropus_vampyrus
ENSOGAG00000003216	CHD3	86	82.246	ENSPNAG00000020393	chd3	98	82.246	Pygocentrus_nattereri
ENSOGAG00000003216	CHD3	93	96.078	ENSRNOG00000009722	Chd3	100	96.078	Rattus_norvegicus
ENSOGAG00000003216	CHD3	100	95.188	ENSRBIG00000033562	CHD3	99	94.666	Rhinopithecus_bieti
ENSOGAG00000003216	CHD3	100	96.650	ENSRROG00000029554	CHD3	100	96.285	Rhinopithecus_roxellana
ENSOGAG00000003216	CHD3	100	98.477	ENSSBOG00000020719	CHD3	99	97.870	Saimiri_boliviensis_boliviensis
ENSOGAG00000003216	CHD3	99	92.602	ENSSHAG00000014412	CHD3	100	92.602	Sarcophilus_harrisii
ENSOGAG00000003216	CHD3	88	79.743	ENSSFOG00015023123	chd3	98	72.712	Scleropages_formosus
ENSOGAG00000003216	CHD3	80	91.304	ENSSMAG00000006451	chd3	94	87.209	Scophthalmus_maximus
ENSOGAG00000003216	CHD3	56	72.389	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSOGAG00000003216	CHD3	80	87.209	ENSSPAG00000013694	chd3	97	87.209	Stegastes_partitus
ENSOGAG00000003216	CHD3	99	97.665	ENSSSCG00000021363	CHD3	100	97.601	Sus_scrofa
ENSOGAG00000003216	CHD3	75	76.693	ENSTRUG00000014990	chd3	89	75.246	Takifugu_rubripes
ENSOGAG00000003216	CHD3	98	72.709	ENSTNIG00000012998	chd3	99	72.414	Tetraodon_nigroviridis
ENSOGAG00000003216	CHD3	64	97.129	ENSTBEG00000011454	-	71	97.129	Tupaia_belangeri
ENSOGAG00000003216	CHD3	99	98.099	ENSTTRG00000010295	CHD3	97	98.099	Tursiops_truncatus
ENSOGAG00000003216	CHD3	93	96.788	ENSUAMG00000005475	CHD3	99	96.788	Ursus_americanus
ENSOGAG00000003216	CHD3	55	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSOGAG00000003216	CHD3	96	97.881	ENSVVUG00000028011	CHD3	99	97.869	Vulpes_vulpes
ENSOGAG00000003216	CHD3	98	72.653	ENSXETG00000012991	chd3	92	74.016	Xenopus_tropicalis
ENSOGAG00000003216	CHD3	51	82.864	ENSXCOG00000000809	chd3	96	83.089	Xiphophorus_couchianus
ENSOGAG00000003216	CHD3	79	86.705	ENSXMAG00000016035	chd3	99	86.705	Xiphophorus_maculatus