EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000003362 (Gene tree)
Gene ID: 100947518
Gene Symbol: YTHDC1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 30435 bases
Position: chrGL873710.1:2414739-2445173
Accession: 100947518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000002999	YTH	PF04146.15	1.8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000003365	YTHDC1-201	2184	-	ENSOGAP00000002999	727 (aa)	XP_012667613	H0WMM2

Gene Model

Click here to download ENSOGAG00000003362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000003362's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000003362	YTHDC1	100	97.799	ENSG00000083896	YTHDC1	100	97.799	Homo_sapiens
ENSOGAG00000003362	YTHDC1	57	60.241	ENSAPOG00000013997	ythdc1	57	63.246	Acanthochromis_polyacanthus
ENSOGAG00000003362	YTHDC1	100	96.990	ENSAMEG00000005688	YTHDC1	100	96.990	Ailuropoda_melanoleuca
ENSOGAG00000003362	YTHDC1	71	58.273	ENSACIG00000019728	ythdc1	80	60.526	Amphilophus_citrinellus
ENSOGAG00000003362	YTHDC1	57	61.927	ENSAOCG00000000239	ythdc1	59	67.654	Amphiprion_ocellaris
ENSOGAG00000003362	YTHDC1	91	84.337	ENSAPLG00000009921	YTHDC1	92	85.994	Anas_platyrhynchos
ENSOGAG00000003362	YTHDC1	93	83.680	ENSACAG00000009697	YTHDC1	93	83.828	Anolis_carolinensis
ENSOGAG00000003362	YTHDC1	100	97.802	ENSANAG00000001522	YTHDC1	100	97.802	Aotus_nancymaae
ENSOGAG00000003362	YTHDC1	92	51.983	ENSACLG00000019371	ythdc1	59	66.819	Astatotilapia_calliptera
ENSOGAG00000003362	YTHDC1	93	64.306	ENSAMXG00000006978	ythdc1	92	65.797	Astyanax_mexicanus
ENSOGAG00000003362	YTHDC1	100	96.159	ENSBTAG00000015572	YTHDC1	100	96.159	Bos_taurus
ENSOGAG00000003362	YTHDC1	100	97.940	ENSCJAG00000009934	YTHDC1	100	97.940	Callithrix_jacchus
ENSOGAG00000003362	YTHDC1	100	96.990	ENSCAFG00000002821	YTHDC1	100	96.990	Canis_familiaris
ENSOGAG00000003362	YTHDC1	100	96.990	ENSCAFG00020027112	YTHDC1	100	96.990	Canis_lupus_dingo
ENSOGAG00000003362	YTHDC1	91	84.844	ENSCHIG00000004810	YTHDC1	95	92.381	Capra_hircus
ENSOGAG00000003362	YTHDC1	100	97.799	ENSTSYG00000011668	YTHDC1	100	97.799	Carlito_syrichta
ENSOGAG00000003362	YTHDC1	90	69.254	ENSCAPG00000008722	YTHDC1	90	69.277	Cavia_aperea
ENSOGAG00000003362	YTHDC1	100	90.371	ENSCPOG00000010929	YTHDC1	100	90.371	Cavia_porcellus
ENSOGAG00000003362	YTHDC1	100	97.937	ENSCCAG00000035754	YTHDC1	100	97.937	Cebus_capucinus
ENSOGAG00000003362	YTHDC1	100	96.603	ENSCATG00000036320	YTHDC1	100	96.603	Cercocebus_atys
ENSOGAG00000003362	YTHDC1	99	95.310	ENSCLAG00000005482	YTHDC1	99	95.310	Chinchilla_lanigera
ENSOGAG00000003362	YTHDC1	100	97.802	ENSCSAG00000005252	YTHDC1	100	97.802	Chlorocebus_sabaeus
ENSOGAG00000003362	YTHDC1	94	85.756	ENSCPBG00000021965	YTHDC1	98	87.040	Chrysemys_picta_bellii
ENSOGAG00000003362	YTHDC1	100	97.802	ENSCANG00000004769	YTHDC1	100	97.802	Colobus_angolensis_palliatus
ENSOGAG00000003362	YTHDC1	93	96.035	ENSCGRG00001000816	Ythdc1	93	96.035	Cricetulus_griseus_chok1gshd
ENSOGAG00000003362	YTHDC1	99	96.797	ENSCGRG00000009807	Ythdc1	99	96.797	Cricetulus_griseus_crigri
ENSOGAG00000003362	YTHDC1	57	60.793	ENSCSEG00000020404	ythdc1	59	66.667	Cynoglossus_semilaevis
ENSOGAG00000003362	YTHDC1	93	64.088	ENSDARG00000051953	ythdc1	58	78.353	Danio_rerio
ENSOGAG00000003362	YTHDC1	93	93.769	ENSDNOG00000004949	YTHDC1	93	94.362	Dasypus_novemcinctus
ENSOGAG00000003362	YTHDC1	99	97.079	ENSDORG00000013045	Ythdc1	100	97.079	Dipodomys_ordii
ENSOGAG00000003362	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	78	100.000	Echinops_telfairi
ENSOGAG00000003362	YTHDC1	100	97.127	ENSEASG00005018383	YTHDC1	100	97.127	Equus_asinus_asinus
ENSOGAG00000003362	YTHDC1	100	97.127	ENSECAG00000018303	YTHDC1	100	97.127	Equus_caballus
ENSOGAG00000003362	YTHDC1	93	91.988	ENSEEUG00000015466	YTHDC1	93	92.582	Erinaceus_europaeus
ENSOGAG00000003362	YTHDC1	93	62.411	ENSELUG00000014029	ythdc1	95	63.368	Esox_lucius
ENSOGAG00000003362	YTHDC1	100	97.123	ENSFCAG00000026791	YTHDC1	100	97.123	Felis_catus
ENSOGAG00000003362	YTHDC1	68	90.138	ENSFALG00000006581	YTHDC1	87	94.404	Ficedula_albicollis
ENSOGAG00000003362	YTHDC1	99	96.513	ENSFDAG00000018560	YTHDC1	100	96.513	Fukomys_damarensis
ENSOGAG00000003362	YTHDC1	65	58.730	ENSFHEG00000001286	ythdc1	60	56.627	Fundulus_heteroclitus
ENSOGAG00000003362	YTHDC1	64	64.539	ENSGMOG00000018815	ythdc1	78	64.539	Gadus_morhua
ENSOGAG00000003362	YTHDC1	92	85.373	ENSGALG00000035906	YTHDC1	85	85.693	Gallus_gallus
ENSOGAG00000003362	YTHDC1	50	66.788	ENSGAFG00000001759	ythdc1	54	68.116	Gambusia_affinis
ENSOGAG00000003362	YTHDC1	57	62.850	ENSGACG00000015486	ythdc1	57	62.963	Gasterosteus_aculeatus
ENSOGAG00000003362	YTHDC1	93	84.897	ENSGAGG00000007108	YTHDC1	93	84.751	Gopherus_agassizii
ENSOGAG00000003362	YTHDC1	100	96.603	ENSGGOG00000021958	YTHDC1	100	96.603	Gorilla_gorilla
ENSOGAG00000003362	YTHDC1	92	52.125	ENSHBUG00000019288	ythdc1	59	66.819	Haplochromis_burtoni
ENSOGAG00000003362	YTHDC1	94	70.073	ENSHGLG00000003239	-	57	78.469	Heterocephalus_glaber_female
ENSOGAG00000003362	YTHDC1	100	95.374	ENSHGLG00000006319	-	100	95.374	Heterocephalus_glaber_female
ENSOGAG00000003362	YTHDC1	94	68.605	ENSHGLG00100008060	-	57	76.010	Heterocephalus_glaber_male
ENSOGAG00000003362	YTHDC1	93	94.978	ENSHGLG00100001556	-	93	94.535	Heterocephalus_glaber_male
ENSOGAG00000003362	YTHDC1	53	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSOGAG00000003362	YTHDC1	93	68.076	ENSIPUG00000018136	ythdc1	61	84.223	Ictalurus_punctatus
ENSOGAG00000003362	YTHDC1	100	96.603	ENSSTOG00000013652	YTHDC1	100	96.603	Ictidomys_tridecemlineatus
ENSOGAG00000003362	YTHDC1	91	90.327	ENSJJAG00000010268	Ythdc1	93	91.369	Jaculus_jaculus
ENSOGAG00000003362	YTHDC1	57	60.731	ENSKMAG00000006483	ythdc1	85	65.760	Kryptolebias_marmoratus
ENSOGAG00000003362	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSOGAG00000003362	YTHDC1	87	74.568	ENSLACG00000004893	YTHDC1	92	74.648	Latimeria_chalumnae
ENSOGAG00000003362	YTHDC1	93	73.225	ENSLOCG00000003045	ythdc1	92	89.183	Lepisosteus_oculatus
ENSOGAG00000003362	YTHDC1	93	91.777	ENSLAFG00000021592	YTHDC1	99	96.848	Loxodonta_africana
ENSOGAG00000003362	YTHDC1	100	96.739	ENSMFAG00000031927	YTHDC1	100	96.739	Macaca_fascicularis
ENSOGAG00000003362	YTHDC1	100	97.802	ENSMMUG00000002265	YTHDC1	100	97.802	Macaca_mulatta
ENSOGAG00000003362	YTHDC1	100	97.802	ENSMNEG00000033751	YTHDC1	100	97.802	Macaca_nemestrina
ENSOGAG00000003362	YTHDC1	100	97.665	ENSMLEG00000042147	YTHDC1	100	97.665	Mandrillus_leucophaeus
ENSOGAG00000003362	YTHDC1	92	51.983	ENSMZEG00005023173	ythdc1	59	66.819	Maylandia_zebra
ENSOGAG00000003362	YTHDC1	93	83.976	ENSMGAG00000010391	YTHDC1	92	85.460	Meleagris_gallopavo
ENSOGAG00000003362	YTHDC1	93	95.742	ENSMAUG00000001286	Ythdc1	93	95.742	Mesocricetus_auratus
ENSOGAG00000003362	YTHDC1	100	96.201	ENSMICG00000034640	YTHDC1	100	96.201	Microcebus_murinus
ENSOGAG00000003362	YTHDC1	100	95.646	ENSMOCG00000020201	Ythdc1	100	95.646	Microtus_ochrogaster
ENSOGAG00000003362	YTHDC1	96	51.857	ENSMODG00000010076	-	96	52.452	Monodelphis_domestica
ENSOGAG00000003362	YTHDC1	93	89.153	ENSMODG00000020754	-	92	88.262	Monodelphis_domestica
ENSOGAG00000003362	YTHDC1	87	69.932	ENSMODG00000014337	-	95	70.316	Monodelphis_domestica
ENSOGAG00000003362	YTHDC1	65	58.298	ENSMODG00000009173	-	88	62.077	Monodelphis_domestica
ENSOGAG00000003362	YTHDC1	50	67.925	ENSMALG00000013412	ythdc1	56	68.919	Monopterus_albus
ENSOGAG00000003362	YTHDC1	93	94.065	MGP_CAROLIEiJ_G0027347	Ythdc1	97	91.408	Mus_caroli
ENSOGAG00000003362	YTHDC1	100	96.159	ENSMUSG00000035851	Ythdc1	100	96.159	Mus_musculus
ENSOGAG00000003362	YTHDC1	100	96.433	MGP_PahariEiJ_G0017126	Ythdc1	100	96.433	Mus_pahari
ENSOGAG00000003362	YTHDC1	100	96.433	MGP_SPRETEiJ_G0028339	Ythdc1	100	96.433	Mus_spretus
ENSOGAG00000003362	YTHDC1	99	96.932	ENSMLUG00000016300	YTHDC1	100	96.932	Myotis_lucifugus
ENSOGAG00000003362	YTHDC1	60	92.009	ENSNGAG00000024000	Ythdc1	93	91.800	Nannospalax_galili
ENSOGAG00000003362	YTHDC1	57	60.890	ENSNBRG00000007663	ythdc1	70	67.056	Neolamprologus_brichardi
ENSOGAG00000003362	YTHDC1	99	95.736	ENSNLEG00000009202	YTHDC1	99	95.736	Nomascus_leucogenys
ENSOGAG00000003362	YTHDC1	80	82.609	ENSMEUG00000007128	YTHDC1	81	82.609	Notamacropus_eugenii
ENSOGAG00000003362	YTHDC1	73	98.300	ENSOPRG00000008986	YTHDC1	74	98.300	Ochotona_princeps
ENSOGAG00000003362	YTHDC1	100	95.873	ENSODEG00000001715	YTHDC1	100	95.873	Octodon_degus
ENSOGAG00000003362	YTHDC1	92	52.833	ENSONIG00000012651	ythdc1	59	67.277	Oreochromis_niloticus
ENSOGAG00000003362	YTHDC1	88	75.841	ENSOANG00000014398	YTHDC1	55	95.949	Ornithorhynchus_anatinus
ENSOGAG00000003362	YTHDC1	93	82.570	ENSOCUG00000015886	YTHDC1	57	96.231	Oryctolagus_cuniculus
ENSOGAG00000003362	YTHDC1	57	60.690	ENSOMEG00000000551	ythdc1	60	64.977	Oryzias_melastigma
ENSOGAG00000003362	YTHDC1	100	96.159	ENSOARG00000008633	YTHDC1	100	96.159	Ovis_aries
ENSOGAG00000003362	YTHDC1	100	96.735	ENSPPAG00000041315	YTHDC1	100	96.735	Pan_paniscus
ENSOGAG00000003362	YTHDC1	100	96.206	ENSPPRG00000011979	YTHDC1	100	96.206	Panthera_pardus
ENSOGAG00000003362	YTHDC1	99	95.879	ENSPTIG00000015527	YTHDC1	100	95.879	Panthera_tigris_altaica
ENSOGAG00000003362	YTHDC1	100	96.735	ENSPTRG00000016105	YTHDC1	100	96.735	Pan_troglodytes
ENSOGAG00000003362	YTHDC1	100	96.603	ENSPANG00000021590	YTHDC1	100	96.603	Papio_anubis
ENSOGAG00000003362	YTHDC1	93	69.388	ENSPKIG00000018497	ythdc1	93	69.041	Paramormyrops_kingsleyae
ENSOGAG00000003362	YTHDC1	91	86.015	ENSPSIG00000002782	YTHDC1	92	85.865	Pelodiscus_sinensis
ENSOGAG00000003362	YTHDC1	99	97.071	ENSPEMG00000013850	Ythdc1	100	97.071	Peromyscus_maniculatus_bairdii
ENSOGAG00000003362	YTHDC1	93	88.707	ENSPCIG00000006870	YTHDC1	92	87.816	Phascolarctos_cinereus
ENSOGAG00000003362	YTHDC1	57	60.000	ENSPFOG00000013404	ythdc1	60	65.675	Poecilia_formosa
ENSOGAG00000003362	YTHDC1	57	60.000	ENSPLAG00000011079	ythdc1	85	65.217	Poecilia_latipinna
ENSOGAG00000003362	YTHDC1	57	60.000	ENSPMEG00000009238	ythdc1	60	65.675	Poecilia_mexicana
ENSOGAG00000003362	YTHDC1	65	71.429	ENSPREG00000016973	ythdc1	59	58.894	Poecilia_reticulata
ENSOGAG00000003362	YTHDC1	87	97.627	ENSPPYG00000014726	YTHDC1	100	97.627	Pongo_abelii
ENSOGAG00000003362	YTHDC1	77	89.545	ENSPCAG00000009607	YTHDC1	77	89.091	Procavia_capensis
ENSOGAG00000003362	YTHDC1	100	92.266	ENSPCOG00000019105	YTHDC1	100	92.266	Propithecus_coquereli
ENSOGAG00000003362	YTHDC1	93	91.285	ENSPVAG00000015551	YTHDC1	93	91.433	Pteropus_vampyrus
ENSOGAG00000003362	YTHDC1	92	51.983	ENSPNYG00000011687	ythdc1	59	66.819	Pundamilia_nyererei
ENSOGAG00000003362	YTHDC1	93	70.058	ENSPNAG00000028365	ythdc1	93	70.000	Pygocentrus_nattereri
ENSOGAG00000003362	YTHDC1	93	93.723	ENSRNOG00000001996	Ythdc1	93	93.723	Rattus_norvegicus
ENSOGAG00000003362	YTHDC1	99	95.461	ENSRBIG00000028279	YTHDC1	99	95.461	Rhinopithecus_bieti
ENSOGAG00000003362	YTHDC1	100	97.802	ENSRROG00000035028	YTHDC1	100	97.802	Rhinopithecus_roxellana
ENSOGAG00000003362	YTHDC1	100	96.875	ENSSBOG00000022353	YTHDC1	100	96.875	Saimiri_boliviensis_boliviensis
ENSOGAG00000003362	YTHDC1	93	87.964	ENSSHAG00000002538	YTHDC1	91	88.102	Sarcophilus_harrisii
ENSOGAG00000003362	YTHDC1	93	69.287	ENSSFOG00015003298	ythdc1	60	86.493	Scleropages_formosus
ENSOGAG00000003362	YTHDC1	57	60.762	ENSSMAG00000009086	ythdc1	60	65.982	Scophthalmus_maximus
ENSOGAG00000003362	YTHDC1	79	97.232	ENSSARG00000010960	YTHDC1	100	97.232	Sorex_araneus
ENSOGAG00000003362	YTHDC1	93	82.718	ENSSPUG00000009357	YTHDC1	92	84.047	Sphenodon_punctatus
ENSOGAG00000003362	YTHDC1	57	62.615	ENSSPAG00000011449	ythdc1	59	67.654	Stegastes_partitus
ENSOGAG00000003362	YTHDC1	100	95.007	ENSSSCG00000035505	YTHDC1	100	95.007	Sus_scrofa
ENSOGAG00000003362	YTHDC1	93	85.757	ENSTGUG00000004452	-	92	85.608	Taeniopygia_guttata
ENSOGAG00000003362	YTHDC1	64	61.224	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSOGAG00000003362	YTHDC1	86	60.738	ENSTNIG00000013243	ythdc1	89	66.512	Tetraodon_nigroviridis
ENSOGAG00000003362	YTHDC1	93	87.519	ENSTBEG00000011546	YTHDC1	92	87.073	Tupaia_belangeri
ENSOGAG00000003362	YTHDC1	93	93.195	ENSTTRG00000005083	YTHDC1	93	93.639	Tursiops_truncatus
ENSOGAG00000003362	YTHDC1	93	96.907	ENSUAMG00000010388	YTHDC1	100	96.907	Ursus_americanus
ENSOGAG00000003362	YTHDC1	99	83.565	ENSUMAG00000013668	YTHDC1	98	83.565	Ursus_maritimus
ENSOGAG00000003362	YTHDC1	100	94.360	ENSVPAG00000009040	YTHDC1	100	94.360	Vicugna_pacos
ENSOGAG00000003362	YTHDC1	99	96.027	ENSVVUG00000005387	YTHDC1	100	96.912	Vulpes_vulpes
ENSOGAG00000003362	YTHDC1	92	73.997	ENSXETG00000017960	ythdc1	91	73.214	Xenopus_tropicalis
ENSOGAG00000003362	YTHDC1	50	52.941	ENSXCOG00000000530	ythdc1	79	53.077	Xiphophorus_couchianus
ENSOGAG00000003362	YTHDC1	57	59.202	ENSXMAG00000005196	ythdc1	61	65.596	Xiphophorus_maculatus