EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000003475 (Gene tree)
Gene ID: 100946631
Gene Symbol: LSG1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 32862 bases
Position: chrGL873579.1:2476532-2509393
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000003096	MMR_HSR1	PF01926.23	3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000003479	LSG1-201	1989	-	ENSOGAP00000003096	662 (aa)	-	H0WMU6

Gene Model

Click here to download ENSOGAG00000003475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000003475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000003475	LSG1	100	85.498	ENSG00000041802	LSG1	98	90.909	Homo_sapiens
ENSOGAG00000003475	LSG1	99	64.608	ENSAPOG00000009694	lsg1	99	64.759	Acanthochromis_polyacanthus
ENSOGAG00000003475	LSG1	99	83.233	ENSAMEG00000009343	LSG1	99	83.233	Ailuropoda_melanoleuca
ENSOGAG00000003475	LSG1	98	64.363	ENSACIG00000012406	lsg1	99	64.103	Amphilophus_citrinellus
ENSOGAG00000003475	LSG1	99	63.855	ENSAOCG00000016066	lsg1	99	63.855	Amphiprion_ocellaris
ENSOGAG00000003475	LSG1	99	63.253	ENSAPEG00000003252	lsg1	99	63.705	Amphiprion_percula
ENSOGAG00000003475	LSG1	98	64.969	ENSATEG00000011794	lsg1	99	64.599	Anabas_testudineus
ENSOGAG00000003475	LSG1	95	64.937	ENSACAG00000004222	LSG1	99	64.409	Anolis_carolinensis
ENSOGAG00000003475	LSG1	100	87.009	ENSANAG00000021153	LSG1	100	87.009	Aotus_nancymaae
ENSOGAG00000003475	LSG1	99	63.338	ENSACLG00000000520	lsg1	99	63.595	Astatotilapia_calliptera
ENSOGAG00000003475	LSG1	99	61.968	ENSAMXG00000008271	lsg1	99	63.134	Astyanax_mexicanus
ENSOGAG00000003475	LSG1	100	81.175	ENSBTAG00000008461	LSG1	100	82.504	Bos_taurus
ENSOGAG00000003475	LSG1	59	51.724	WBGene00016907	C53H9.2	86	51.724	Caenorhabditis_elegans
ENSOGAG00000003475	LSG1	100	86.254	ENSCJAG00000013962	LSG1	100	86.254	Callithrix_jacchus
ENSOGAG00000003475	LSG1	95	84.261	ENSCAFG00000013445	LSG1	99	84.261	Canis_familiaris
ENSOGAG00000003475	LSG1	99	83.107	ENSCAFG00020002216	LSG1	99	84.480	Canis_lupus_dingo
ENSOGAG00000003475	LSG1	99	82.477	ENSCHIG00000015769	LSG1	99	82.477	Capra_hircus
ENSOGAG00000003475	LSG1	100	86.727	ENSTSYG00000001447	LSG1	100	86.727	Carlito_syrichta
ENSOGAG00000003475	LSG1	95	76.424	ENSCAPG00000009856	LSG1	100	76.153	Cavia_aperea
ENSOGAG00000003475	LSG1	100	85.650	ENSCCAG00000035744	LSG1	100	85.650	Cebus_capucinus
ENSOGAG00000003475	LSG1	100	86.254	ENSCATG00000042060	LSG1	100	84.592	Cercocebus_atys
ENSOGAG00000003475	LSG1	100	86.858	ENSCSAG00000008796	LSG1	92	86.858	Chlorocebus_sabaeus
ENSOGAG00000003475	LSG1	99	69.670	ENSCPBG00000015941	LSG1	83	69.474	Chrysemys_picta_bellii
ENSOGAG00000003475	LSG1	73	57.477	ENSCING00000007079	-	99	57.477	Ciona_intestinalis
ENSOGAG00000003475	LSG1	78	53.755	ENSCSAVG00000002514	-	98	53.755	Ciona_savignyi
ENSOGAG00000003475	LSG1	100	86.707	ENSCANG00000030709	LSG1	100	86.707	Colobus_angolensis_palliatus
ENSOGAG00000003475	LSG1	100	81.777	ENSCGRG00001019846	Lsg1	100	81.928	Cricetulus_griseus_chok1gshd
ENSOGAG00000003475	LSG1	100	81.777	ENSCGRG00000014617	Lsg1	100	81.928	Cricetulus_griseus_crigri
ENSOGAG00000003475	LSG1	98	63.441	ENSCSEG00000008522	lsg1	99	63.253	Cynoglossus_semilaevis
ENSOGAG00000003475	LSG1	97	64.551	ENSCVAG00000002484	lsg1	99	64.653	Cyprinodon_variegatus
ENSOGAG00000003475	LSG1	99	65.106	ENSDARG00000015352	lsg1	99	64.671	Danio_rerio
ENSOGAG00000003475	LSG1	100	82.883	ENSDNOG00000006224	LSG1	100	82.583	Dasypus_novemcinctus
ENSOGAG00000003475	LSG1	84	59.426	FBgn0266284	Ns3	94	56.705	Drosophila_melanogaster
ENSOGAG00000003475	LSG1	88	85.333	ENSETEG00000003888	LSG1	89	85.333	Echinops_telfairi
ENSOGAG00000003475	LSG1	88	57.238	ENSEBUG00000003119	lsg1	85	56.928	Eptatretus_burgeri
ENSOGAG00000003475	LSG1	100	85.520	ENSEASG00005000678	LSG1	100	85.520	Equus_asinus_asinus
ENSOGAG00000003475	LSG1	100	85.520	ENSECAG00000017659	LSG1	100	85.520	Equus_caballus
ENSOGAG00000003475	LSG1	87	81.034	ENSEEUG00000015217	LSG1	87	81.034	Erinaceus_europaeus
ENSOGAG00000003475	LSG1	99	60.475	ENSELUG00000023973	lsg1	99	61.111	Esox_lucius
ENSOGAG00000003475	LSG1	99	84.743	ENSFCAG00000024957	LSG1	99	84.743	Felis_catus
ENSOGAG00000003475	LSG1	92	65.217	ENSFALG00000007210	LSG1	94	64.677	Ficedula_albicollis
ENSOGAG00000003475	LSG1	100	78.733	ENSFDAG00000017373	LSG1	100	77.677	Fukomys_damarensis
ENSOGAG00000003475	LSG1	97	63.876	ENSFHEG00000003680	lsg1	99	63.213	Fundulus_heteroclitus
ENSOGAG00000003475	LSG1	84	70.100	ENSGMOG00000015834	lsg1	91	70.100	Gadus_morhua
ENSOGAG00000003475	LSG1	99	62.930	ENSGALG00000007058	LSG1	87	62.445	Gallus_gallus
ENSOGAG00000003475	LSG1	97	63.411	ENSGAFG00000015831	lsg1	99	63.008	Gambusia_affinis
ENSOGAG00000003475	LSG1	98	62.405	ENSGACG00000009323	lsg1	99	61.664	Gasterosteus_aculeatus
ENSOGAG00000003475	LSG1	100	86.103	ENSGGOG00000000520	LSG1	100	86.103	Gorilla_gorilla
ENSOGAG00000003475	LSG1	99	62.908	ENSHBUG00000005659	lsg1	99	63.293	Haplochromis_burtoni
ENSOGAG00000003475	LSG1	100	75.676	ENSHGLG00000017390	LSG1	100	75.826	Heterocephalus_glaber_female
ENSOGAG00000003475	LSG1	100	75.676	ENSHGLG00100018587	LSG1	100	75.826	Heterocephalus_glaber_male
ENSOGAG00000003475	LSG1	97	63.988	ENSHCOG00000016848	lsg1	99	63.801	Hippocampus_comes
ENSOGAG00000003475	LSG1	99	64.671	ENSIPUG00000008631	lsg1	99	64.521	Ictalurus_punctatus
ENSOGAG00000003475	LSG1	81	79.920	ENSSTOG00000010234	LSG1	99	81.909	Ictidomys_tridecemlineatus
ENSOGAG00000003475	LSG1	100	80.723	ENSJJAG00000015513	Lsg1	100	80.723	Jaculus_jaculus
ENSOGAG00000003475	LSG1	98	62.712	ENSKMAG00000009681	lsg1	99	62.387	Kryptolebias_marmoratus
ENSOGAG00000003475	LSG1	98	62.866	ENSLBEG00000024261	lsg1	99	62.840	Labrus_bergylta
ENSOGAG00000003475	LSG1	99	65.067	ENSLACG00000013399	LSG1	99	65.067	Latimeria_chalumnae
ENSOGAG00000003475	LSG1	98	64.000	ENSLOCG00000004918	lsg1	99	64.741	Lepisosteus_oculatus
ENSOGAG00000003475	LSG1	100	83.560	ENSLAFG00000012919	-	100	83.560	Loxodonta_africana
ENSOGAG00000003475	LSG1	100	86.707	ENSMFAG00000039903	LSG1	100	85.045	Macaca_fascicularis
ENSOGAG00000003475	LSG1	100	86.858	ENSMMUG00000010708	LSG1	100	86.858	Macaca_mulatta
ENSOGAG00000003475	LSG1	100	86.707	ENSMNEG00000031538	LSG1	100	84.894	Macaca_nemestrina
ENSOGAG00000003475	LSG1	100	86.858	ENSMLEG00000041184	LSG1	100	86.858	Mandrillus_leucophaeus
ENSOGAG00000003475	LSG1	99	63.229	ENSMAMG00000000470	lsg1	99	62.930	Mastacembelus_armatus
ENSOGAG00000003475	LSG1	99	63.501	ENSMZEG00005017865	lsg1	99	63.444	Maylandia_zebra
ENSOGAG00000003475	LSG1	88	64.933	ENSMGAG00000007050	LSG1	99	64.286	Meleagris_gallopavo
ENSOGAG00000003475	LSG1	91	80.560	ENSMAUG00000016976	Lsg1	93	80.725	Mesocricetus_auratus
ENSOGAG00000003475	LSG1	100	88.235	ENSMICG00000049087	LSG1	100	88.235	Microcebus_murinus
ENSOGAG00000003475	LSG1	100	81.081	ENSMOCG00000022136	Lsg1	100	81.231	Microtus_ochrogaster
ENSOGAG00000003475	LSG1	83	73.090	ENSMMOG00000008884	lsg1	99	73.090	Mola_mola
ENSOGAG00000003475	LSG1	99	56.581	ENSMODG00000019828	LSG1	99	55.605	Monodelphis_domestica
ENSOGAG00000003475	LSG1	100	80.363	MGP_CAROLIEiJ_G0020648	Lsg1	100	80.543	Mus_caroli
ENSOGAG00000003475	LSG1	100	80.816	ENSMUSG00000022538	Lsg1	100	80.816	Mus_musculus
ENSOGAG00000003475	LSG1	98	80.215	MGP_PahariEiJ_G0016352	Lsg1	100	80.422	Mus_pahari
ENSOGAG00000003475	LSG1	100	80.514	MGP_SPRETEiJ_G0021544	Lsg1	100	80.694	Mus_spretus
ENSOGAG00000003475	LSG1	99	82.779	ENSMPUG00000003734	LSG1	99	82.779	Mustela_putorius_furo
ENSOGAG00000003475	LSG1	99	86.103	ENSMLUG00000012548	LSG1	99	86.103	Myotis_lucifugus
ENSOGAG00000003475	LSG1	100	81.297	ENSNGAG00000021872	Lsg1	100	80.241	Nannospalax_galili
ENSOGAG00000003475	LSG1	100	86.707	ENSNLEG00000008293	LSG1	100	86.707	Nomascus_leucogenys
ENSOGAG00000003475	LSG1	68	69.274	ENSMEUG00000009041	-	82	69.767	Notamacropus_eugenii
ENSOGAG00000003475	LSG1	99	63.459	ENSONIG00000002635	lsg1	99	63.348	Oreochromis_niloticus
ENSOGAG00000003475	LSG1	95	71.632	ENSOANG00000012742	LSG1	99	71.315	Ornithorhynchus_anatinus
ENSOGAG00000003475	LSG1	100	85.520	ENSOCUG00000004817	LSG1	100	85.520	Oryctolagus_cuniculus
ENSOGAG00000003475	LSG1	98	62.712	ENSORLG00000007695	lsg1	99	62.632	Oryzias_latipes
ENSOGAG00000003475	LSG1	98	62.654	ENSORLG00020016286	lsg1	99	61.631	Oryzias_latipes_hni
ENSOGAG00000003475	LSG1	98	62.500	ENSORLG00015012025	lsg1	99	62.179	Oryzias_latipes_hsok
ENSOGAG00000003475	LSG1	98	61.574	ENSOMEG00000022379	lsg1	99	61.388	Oryzias_melastigma
ENSOGAG00000003475	LSG1	99	81.873	ENSOARG00000020403	LSG1	99	82.628	Ovis_aries
ENSOGAG00000003475	LSG1	100	85.650	ENSPPAG00000029271	LSG1	100	85.650	Pan_paniscus
ENSOGAG00000003475	LSG1	99	84.708	ENSPPRG00000010281	LSG1	99	84.708	Panthera_pardus
ENSOGAG00000003475	LSG1	99	85.347	ENSPTIG00000010789	LSG1	99	85.347	Panthera_tigris_altaica
ENSOGAG00000003475	LSG1	100	85.498	ENSPTRG00000015760	LSG1	100	85.498	Pan_troglodytes
ENSOGAG00000003475	LSG1	100	86.405	ENSPANG00000018249	LSG1	100	84.894	Papio_anubis
ENSOGAG00000003475	LSG1	96	63.950	ENSPKIG00000002895	lsg1	100	62.481	Paramormyrops_kingsleyae
ENSOGAG00000003475	LSG1	96	66.667	ENSPSIG00000009821	LSG1	99	65.736	Pelodiscus_sinensis
ENSOGAG00000003475	LSG1	95	63.810	ENSPMGG00000000931	lsg1	99	63.651	Periophthalmus_magnuspinnatus
ENSOGAG00000003475	LSG1	100	81.081	ENSPEMG00000012082	-	100	80.631	Peromyscus_maniculatus_bairdii
ENSOGAG00000003475	LSG1	99	59.334	ENSPMAG00000007451	lsg1	99	59.479	Petromyzon_marinus
ENSOGAG00000003475	LSG1	99	69.519	ENSPCIG00000013890	LSG1	81	69.519	Phascolarctos_cinereus
ENSOGAG00000003475	LSG1	97	64.186	ENSPFOG00000021882	lsg1	99	63.650	Poecilia_formosa
ENSOGAG00000003475	LSG1	97	63.411	ENSPLAG00000019536	lsg1	99	62.760	Poecilia_latipinna
ENSOGAG00000003475	LSG1	97	63.369	ENSPMEG00000017281	lsg1	99	62.870	Poecilia_mexicana
ENSOGAG00000003475	LSG1	97	54.325	ENSPREG00000006048	lsg1	99	54.370	Poecilia_reticulata
ENSOGAG00000003475	LSG1	92	85.434	ENSPPYG00000014425	LSG1	100	85.434	Pongo_abelii
ENSOGAG00000003475	LSG1	90	86.667	ENSPCAG00000005511	LSG1	90	86.667	Procavia_capensis
ENSOGAG00000003475	LSG1	100	89.140	ENSPCOG00000012360	LSG1	100	89.140	Propithecus_coquereli
ENSOGAG00000003475	LSG1	99	63.189	ENSPNYG00000021994	lsg1	99	63.444	Pundamilia_nyererei
ENSOGAG00000003475	LSG1	99	64.000	ENSPNAG00000015533	lsg1	99	63.893	Pygocentrus_nattereri
ENSOGAG00000003475	LSG1	100	80.360	ENSRNOG00000001727	Lsg1	100	80.360	Rattus_norvegicus
ENSOGAG00000003475	LSG1	100	85.952	ENSRBIG00000029053	LSG1	100	85.952	Rhinopithecus_bieti
ENSOGAG00000003475	LSG1	100	85.952	ENSRROG00000037702	LSG1	100	85.952	Rhinopithecus_roxellana
ENSOGAG00000003475	LSG1	69	47.162	YGL099W	LSG1	70	47.598	Saccharomyces_cerevisiae
ENSOGAG00000003475	LSG1	100	86.858	ENSSBOG00000034938	LSG1	100	86.858	Saimiri_boliviensis_boliviensis
ENSOGAG00000003475	LSG1	78	66.415	ENSSHAG00000003487	LSG1	99	65.849	Sarcophilus_harrisii
ENSOGAG00000003475	LSG1	98	63.957	ENSSFOG00015008955	lsg1	99	62.739	Scleropages_formosus
ENSOGAG00000003475	LSG1	98	63.843	ENSSDUG00000004622	lsg1	99	63.798	Seriola_dumerili
ENSOGAG00000003475	LSG1	98	63.735	ENSSLDG00000010869	lsg1	99	63.843	Seriola_lalandi_dorsalis
ENSOGAG00000003475	LSG1	81	79.883	ENSSARG00000012981	LSG1	81	79.883	Sorex_araneus
ENSOGAG00000003475	LSG1	99	67.362	ENSSPUG00000016347	LSG1	99	66.766	Sphenodon_punctatus
ENSOGAG00000003475	LSG1	99	81.873	ENSSSCG00000011827	LSG1	99	81.118	Sus_scrofa
ENSOGAG00000003475	LSG1	88	64.214	ENSTGUG00000009068	LSG1	99	63.272	Taeniopygia_guttata
ENSOGAG00000003475	LSG1	97	60.245	ENSTRUG00000017380	lsg1	99	59.851	Takifugu_rubripes
ENSOGAG00000003475	LSG1	97	63.247	ENSTNIG00000015570	lsg1	99	63.378	Tetraodon_nigroviridis
ENSOGAG00000003475	LSG1	99	74.510	ENSTTRG00000000559	LSG1	99	74.510	Tursiops_truncatus
ENSOGAG00000003475	LSG1	99	84.290	ENSUAMG00000012454	LSG1	99	84.290	Ursus_americanus
ENSOGAG00000003475	LSG1	99	84.290	ENSUMAG00000000855	LSG1	99	84.290	Ursus_maritimus
ENSOGAG00000003475	LSG1	95	79.332	ENSVPAG00000012400	LSG1	99	79.332	Vicugna_pacos
ENSOGAG00000003475	LSG1	95	83.625	ENSVVUG00000008956	LSG1	97	83.625	Vulpes_vulpes
ENSOGAG00000003475	LSG1	99	65.667	ENSXETG00000003451	lsg1	99	65.850	Xenopus_tropicalis
ENSOGAG00000003475	LSG1	97	63.932	ENSXCOG00000003239	lsg1	99	63.293	Xiphophorus_couchianus
ENSOGAG00000003475	LSG1	97	62.822	ENSXMAG00000005536	lsg1	99	62.963	Xiphophorus_maculatus