EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000004044 (Gene tree)
Gene ID: 100945340
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 58534 bases
Position: chrGL873535.1:19163108-19221641
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000003606	zf-CCCH	PF00642.24	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000004048	RC3H1-201	3664	-	ENSOGAP00000003606	1134 (aa)	-	H0WP17

Gene Model

Click here to download ENSOGAG00000004044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000004044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000004044	RC3H1	92	48.624	ENSOGAG00000010678	RC3H2	88	47.459

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000004044	RC3H1	100	90.220	ENSG00000135870	RC3H1	100	90.220	Homo_sapiens
ENSOGAG00000004044	RC3H1	100	89.418	ENSAMEG00000015657	RC3H1	100	89.418	Ailuropoda_melanoleuca
ENSOGAG00000004044	RC3H1	100	81.359	ENSAPLG00000005341	RC3H1	100	80.820	Anas_platyrhynchos
ENSOGAG00000004044	RC3H1	100	77.942	ENSACAG00000015271	RC3H1	100	77.729	Anolis_carolinensis
ENSOGAG00000004044	RC3H1	100	90.132	ENSANAG00000036716	RC3H1	100	90.220	Aotus_nancymaae
ENSOGAG00000004044	RC3H1	100	88.811	ENSBTAG00000052708	RC3H1	100	88.811	Bos_taurus
ENSOGAG00000004044	RC3H1	100	89.780	ENSCJAG00000009106	RC3H1	100	89.868	Callithrix_jacchus
ENSOGAG00000004044	RC3H1	100	89.683	ENSCAFG00000014434	RC3H1	100	89.683	Canis_familiaris
ENSOGAG00000004044	RC3H1	100	89.604	ENSCAFG00020017112	RC3H1	100	89.604	Canis_lupus_dingo
ENSOGAG00000004044	RC3H1	100	89.242	ENSCHIG00000002873	RC3H1	100	89.242	Capra_hircus
ENSOGAG00000004044	RC3H1	99	88.183	ENSTSYG00000003913	RC3H1	99	88.183	Carlito_syrichta
ENSOGAG00000004044	RC3H1	100	84.934	ENSCPOG00000004349	RC3H1	100	84.581	Cavia_porcellus
ENSOGAG00000004044	RC3H1	100	88.106	ENSCCAG00000025652	RC3H1	100	88.194	Cebus_capucinus
ENSOGAG00000004044	RC3H1	100	90.396	ENSCATG00000033497	RC3H1	100	90.396	Cercocebus_atys
ENSOGAG00000004044	RC3H1	100	88.194	ENSCLAG00000011267	RC3H1	100	88.194	Chinchilla_lanigera
ENSOGAG00000004044	RC3H1	96	90.074	ENSCSAG00000011823	RC3H1	85	90.074	Chlorocebus_sabaeus
ENSOGAG00000004044	RC3H1	100	82.472	ENSCPBG00000014670	RC3H1	100	81.946	Chrysemys_picta_bellii
ENSOGAG00000004044	RC3H1	100	90.405	ENSCANG00000032120	RC3H1	100	90.405	Colobus_angolensis_palliatus
ENSOGAG00000004044	RC3H1	100	87.213	ENSCGRG00001020812	Rc3h1	100	87.213	Cricetulus_griseus_chok1gshd
ENSOGAG00000004044	RC3H1	100	87.213	ENSCGRG00000011952	Rc3h1	100	87.213	Cricetulus_griseus_crigri
ENSOGAG00000004044	RC3H1	55	90.705	ENSDNOG00000011494	RC3H1	99	90.705	Dasypus_novemcinctus
ENSOGAG00000004044	RC3H1	100	88.713	ENSDORG00000004855	Rc3h1	100	88.624	Dipodomys_ordii
ENSOGAG00000004044	RC3H1	82	90.909	ENSETEG00000012064	RC3H1	87	90.909	Echinops_telfairi
ENSOGAG00000004044	RC3H1	100	88.624	ENSEASG00005017000	RC3H1	100	88.624	Equus_asinus_asinus
ENSOGAG00000004044	RC3H1	100	88.448	ENSECAG00000021208	RC3H1	100	88.448	Equus_caballus
ENSOGAG00000004044	RC3H1	83	93.162	ENSEEUG00000014861	RC3H1	93	78.344	Erinaceus_europaeus
ENSOGAG00000004044	RC3H1	100	89.956	ENSFCAG00000014924	RC3H1	100	89.956	Felis_catus
ENSOGAG00000004044	RC3H1	100	80.279	ENSFALG00000002947	RC3H1	100	79.651	Ficedula_albicollis
ENSOGAG00000004044	RC3H1	100	88.106	ENSFDAG00000013303	RC3H1	100	88.106	Fukomys_damarensis
ENSOGAG00000004044	RC3H1	100	80.473	ENSGALG00000004587	RC3H1	100	79.930	Gallus_gallus
ENSOGAG00000004044	RC3H1	100	80.894	ENSGAGG00000018194	RC3H1	100	80.719	Gopherus_agassizii
ENSOGAG00000004044	RC3H1	100	83.406	ENSGGOG00000005735	RC3H1	100	83.406	Gorilla_gorilla
ENSOGAG00000004044	RC3H1	88	88.031	ENSHGLG00000004183	-	100	88.031	Heterocephalus_glaber_female
ENSOGAG00000004044	RC3H1	100	87.930	ENSHGLG00100008577	RC3H1	100	87.930	Heterocephalus_glaber_male
ENSOGAG00000004044	RC3H1	100	89.075	ENSSTOG00000016033	RC3H1	100	89.339	Ictidomys_tridecemlineatus
ENSOGAG00000004044	RC3H1	100	88.183	ENSJJAG00000018915	Rc3h1	100	88.183	Jaculus_jaculus
ENSOGAG00000004044	RC3H1	100	68.549	ENSLACG00000016186	RC3H1	100	69.979	Latimeria_chalumnae
ENSOGAG00000004044	RC3H1	97	90.173	ENSLAFG00000004367	RC3H1	100	90.173	Loxodonta_africana
ENSOGAG00000004044	RC3H1	100	90.308	ENSMFAG00000033725	RC3H1	100	90.308	Macaca_fascicularis
ENSOGAG00000004044	RC3H1	100	90.220	ENSMMUG00000000630	RC3H1	100	90.220	Macaca_mulatta
ENSOGAG00000004044	RC3H1	100	90.396	ENSMNEG00000035968	RC3H1	100	90.396	Macaca_nemestrina
ENSOGAG00000004044	RC3H1	100	90.308	ENSMLEG00000037455	RC3H1	100	90.308	Mandrillus_leucophaeus
ENSOGAG00000004044	RC3H1	88	86.419	ENSMAUG00000020864	Rc3h1	93	86.419	Mesocricetus_auratus
ENSOGAG00000004044	RC3H1	100	91.358	ENSMICG00000003000	RC3H1	100	91.358	Microcebus_murinus
ENSOGAG00000004044	RC3H1	93	85.525	ENSMOCG00000016587	Rc3h1	98	85.147	Microtus_ochrogaster
ENSOGAG00000004044	RC3H1	100	85.387	ENSMODG00000004289	RC3H1	100	85.475	Monodelphis_domestica
ENSOGAG00000004044	RC3H1	100	86.508	MGP_CAROLIEiJ_G0014756	Rc3h1	100	86.508	Mus_caroli
ENSOGAG00000004044	RC3H1	100	86.332	ENSMUSG00000040423	Rc3h1	100	85.979	Mus_musculus
ENSOGAG00000004044	RC3H1	100	86.155	MGP_PahariEiJ_G0027992	Rc3h1	100	85.802	Mus_pahari
ENSOGAG00000004044	RC3H1	100	86.155	MGP_SPRETEiJ_G0015563	Rc3h1	100	85.802	Mus_spretus
ENSOGAG00000004044	RC3H1	100	88.987	ENSMPUG00000004747	RC3H1	100	88.987	Mustela_putorius_furo
ENSOGAG00000004044	RC3H1	100	88.536	ENSMLUG00000011127	RC3H1	100	88.536	Myotis_lucifugus
ENSOGAG00000004044	RC3H1	100	88.801	ENSNGAG00000011135	Rc3h1	100	88.536	Nannospalax_galili
ENSOGAG00000004044	RC3H1	100	90.132	ENSNLEG00000015327	RC3H1	100	90.132	Nomascus_leucogenys
ENSOGAG00000004044	RC3H1	99	75.795	ENSOPRG00000013068	RC3H1	99	75.442	Ochotona_princeps
ENSOGAG00000004044	RC3H1	100	87.841	ENSODEG00000014185	RC3H1	100	87.841	Octodon_degus
ENSOGAG00000004044	RC3H1	100	84.045	ENSOANG00000000924	RC3H1	100	84.220	Ornithorhynchus_anatinus
ENSOGAG00000004044	RC3H1	99	88.909	ENSOCUG00000004930	RC3H1	98	88.909	Oryctolagus_cuniculus
ENSOGAG00000004044	RC3H1	100	89.405	ENSOARG00000013011	RC3H1	100	89.405	Ovis_aries
ENSOGAG00000004044	RC3H1	100	90.229	ENSPPAG00000039253	RC3H1	100	90.229	Pan_paniscus
ENSOGAG00000004044	RC3H1	100	89.330	ENSPPRG00000009007	RC3H1	100	89.330	Panthera_pardus
ENSOGAG00000004044	RC3H1	100	89.728	ENSPTIG00000015326	RC3H1	100	89.728	Panthera_tigris_altaica
ENSOGAG00000004044	RC3H1	100	90.229	ENSPTRG00000001702	RC3H1	100	90.229	Pan_troglodytes
ENSOGAG00000004044	RC3H1	100	90.308	ENSPANG00000008886	RC3H1	100	90.308	Papio_anubis
ENSOGAG00000004044	RC3H1	100	82.049	ENSPSIG00000016181	RC3H1	100	82.137	Pelodiscus_sinensis
ENSOGAG00000004044	RC3H1	100	87.037	ENSPEMG00000011966	Rc3h1	100	86.949	Peromyscus_maniculatus_bairdii
ENSOGAG00000004044	RC3H1	72	82.353	ENSPCIG00000002058	RC3H1	98	84.217	Phascolarctos_cinereus
ENSOGAG00000004044	RC3H1	100	86.960	ENSPPYG00000000490	RC3H1	100	86.960	Pongo_abelii
ENSOGAG00000004044	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSOGAG00000004044	RC3H1	89	89.007	ENSPCOG00000021795	RC3H1	100	89.007	Propithecus_coquereli
ENSOGAG00000004044	RC3H1	94	100.000	ENSPVAG00000007593	RC3H1	100	85.450	Pteropus_vampyrus
ENSOGAG00000004044	RC3H1	97	55.097	ENSPNAG00000023439	rc3h1a	95	74.439	Pygocentrus_nattereri
ENSOGAG00000004044	RC3H1	100	90.317	ENSRBIG00000037743	RC3H1	100	90.317	Rhinopithecus_bieti
ENSOGAG00000004044	RC3H1	100	90.220	ENSRROG00000036546	RC3H1	100	90.220	Rhinopithecus_roxellana
ENSOGAG00000004044	RC3H1	93	79.453	ENSSBOG00000010664	RC3H1	100	83.365	Saimiri_boliviensis_boliviensis
ENSOGAG00000004044	RC3H1	100	84.345	ENSSHAG00000007589	RC3H1	100	84.433	Sarcophilus_harrisii
ENSOGAG00000004044	RC3H1	87	81.690	ENSSARG00000004660	RC3H1	86	81.690	Sorex_araneus
ENSOGAG00000004044	RC3H1	100	79.703	ENSSPUG00000018472	RC3H1	100	79.772	Sphenodon_punctatus
ENSOGAG00000004044	RC3H1	100	90.123	ENSSSCG00000015498	RC3H1	100	90.123	Sus_scrofa
ENSOGAG00000004044	RC3H1	100	80.894	ENSTGUG00000004090	RC3H1	100	80.018	Taeniopygia_guttata
ENSOGAG00000004044	RC3H1	93	90.345	ENSTBEG00000005015	RC3H1	93	90.345	Tupaia_belangeri
ENSOGAG00000004044	RC3H1	100	89.270	ENSTTRG00000008572	RC3H1	100	89.270	Tursiops_truncatus
ENSOGAG00000004044	RC3H1	100	88.889	ENSUAMG00000019525	RC3H1	100	88.889	Ursus_americanus
ENSOGAG00000004044	RC3H1	100	89.427	ENSUMAG00000020087	RC3H1	100	89.427	Ursus_maritimus
ENSOGAG00000004044	RC3H1	91	94.755	ENSVPAG00000002591	RC3H1	92	94.755	Vicugna_pacos
ENSOGAG00000004044	RC3H1	100	89.367	ENSVVUG00000014201	RC3H1	100	89.367	Vulpes_vulpes
ENSOGAG00000004044	RC3H1	100	72.111	ENSXETG00000020030	rc3h1	100	71.677	Xenopus_tropicalis