EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000004966 (Gene tree)
Gene ID: 100948536
Gene Symbol: SMG5
Alias: -
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 32587 bases
Position: chrGL873610.1:3982952-4015538
Accession: 24644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000004437	EST1	PF10374.9	7.7e-24	1	1
ENSOGAP00000004437	EST1_DNA_bind	PF10373.9	2.5e-40	1	2
ENSOGAP00000004437	EST1_DNA_bind	PF10373.9	2.5e-40	2	2
ENSOGAP00000004437	PIN_4	PF13638.6	6.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000004972	SMG5-201	3051	-	ENSOGAP00000004437	1016 (aa)	-	H0WR15

Gene Model

Click here to download ENSOGAG00000004966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000004966's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000004966	SMG5	100	95.276	ENSG00000198952	SMG5	100	95.276	Homo_sapiens
ENSOGAG00000004966	SMG5	99	66.798	ENSAPOG00000019690	smg5	99	65.714	Acanthochromis_polyacanthus
ENSOGAG00000004966	SMG5	98	91.944	ENSAMEG00000014458	SMG5	100	91.944	Ailuropoda_melanoleuca
ENSOGAG00000004966	SMG5	99	64.541	ENSACIG00000001353	smg5	99	65.511	Amphilophus_citrinellus
ENSOGAG00000004966	SMG5	99	63.389	ENSAOCG00000019483	smg5	95	65.222	Amphiprion_ocellaris
ENSOGAG00000004966	SMG5	99	65.137	ENSAPEG00000022949	smg5	99	64.804	Amphiprion_percula
ENSOGAG00000004966	SMG5	99	64.966	ENSATEG00000005348	smg5	99	66.019	Anabas_testudineus
ENSOGAG00000004966	SMG5	98	77.951	ENSAPLG00000010263	SMG5	100	77.561	Anas_platyrhynchos
ENSOGAG00000004966	SMG5	100	94.882	ENSANAG00000032899	SMG5	100	94.882	Aotus_nancymaae
ENSOGAG00000004966	SMG5	99	64.569	ENSACLG00000009311	smg5	99	64.928	Astatotilapia_calliptera
ENSOGAG00000004966	SMG5	100	94.291	ENSBTAG00000009435	SMG5	100	94.291	Bos_taurus
ENSOGAG00000004966	SMG5	99	43.491	ENSBTAG00000021747	-	99	42.719	Bos_taurus
ENSOGAG00000004966	SMG5	100	95.079	ENSCJAG00000005684	SMG5	100	95.079	Callithrix_jacchus
ENSOGAG00000004966	SMG5	100	94.094	ENSCAFG00000016839	SMG5	100	93.406	Canis_familiaris
ENSOGAG00000004966	SMG5	100	94.094	ENSCAFG00020006061	SMG5	100	93.406	Canis_lupus_dingo
ENSOGAG00000004966	SMG5	100	94.094	ENSCHIG00000007709	SMG5	100	94.094	Capra_hircus
ENSOGAG00000004966	SMG5	99	43.945	ENSCHIG00000006323	-	99	42.969	Capra_hircus
ENSOGAG00000004966	SMG5	100	94.985	ENSTSYG00000004099	SMG5	100	93.904	Carlito_syrichta
ENSOGAG00000004966	SMG5	97	72.921	ENSCAPG00000003631	SMG5	93	85.626	Cavia_aperea
ENSOGAG00000004966	SMG5	100	93.811	ENSCPOG00000015696	SMG5	100	93.517	Cavia_porcellus
ENSOGAG00000004966	SMG5	100	94.980	ENSCCAG00000027409	SMG5	100	94.980	Cebus_capucinus
ENSOGAG00000004966	SMG5	100	95.276	ENSCATG00000030539	SMG5	100	95.276	Cercocebus_atys
ENSOGAG00000004966	SMG5	100	94.499	ENSCLAG00000003983	SMG5	100	94.401	Chinchilla_lanigera
ENSOGAG00000004966	SMG5	100	95.177	ENSCSAG00000002120	SMG5	100	95.177	Chlorocebus_sabaeus
ENSOGAG00000004966	SMG5	54	89.416	ENSCHOG00000008741	-	57	89.416	Choloepus_hoffmanni
ENSOGAG00000004966	SMG5	94	77.282	ENSCPBG00000025848	SMG5	100	77.282	Chrysemys_picta_bellii
ENSOGAG00000004966	SMG5	93	34.631	ENSCING00000008706	-	99	34.318	Ciona_intestinalis
ENSOGAG00000004966	SMG5	100	91.240	ENSCANG00000029208	SMG5	100	91.240	Colobus_angolensis_palliatus
ENSOGAG00000004966	SMG5	100	91.257	ENSCGRG00001006336	Smg5	100	90.963	Cricetulus_griseus_chok1gshd
ENSOGAG00000004966	SMG5	98	91.247	ENSCGRG00000005111	Smg5	100	90.937	Cricetulus_griseus_crigri
ENSOGAG00000004966	SMG5	99	64.665	ENSCSEG00000014220	smg5	92	77.088	Cynoglossus_semilaevis
ENSOGAG00000004966	SMG5	99	60.449	ENSCVAG00000000529	smg5	99	60.488	Cyprinodon_variegatus
ENSOGAG00000004966	SMG5	100	90.157	ENSDNOG00000000051	SMG5	100	90.157	Dasypus_novemcinctus
ENSOGAG00000004966	SMG5	92	36.316	ENSDNOG00000039862	-	100	35.127	Dasypus_novemcinctus
ENSOGAG00000004966	SMG5	100	92.338	ENSDORG00000010382	Smg5	100	91.650	Dipodomys_ordii
ENSOGAG00000004966	SMG5	82	97.087	ENSETEG00000010336	SMG5	91	97.087	Echinops_telfairi
ENSOGAG00000004966	SMG5	90	46.702	ENSEBUG00000003739	smg5	98	46.318	Eptatretus_burgeri
ENSOGAG00000004966	SMG5	100	94.488	ENSEASG00005019122	SMG5	100	94.488	Equus_asinus_asinus
ENSOGAG00000004966	SMG5	100	94.488	ENSECAG00000001389	SMG5	100	94.488	Equus_caballus
ENSOGAG00000004966	SMG5	72	97.406	ENSEEUG00000012690	SMG5	74	97.406	Erinaceus_europaeus
ENSOGAG00000004966	SMG5	99	65.116	ENSELUG00000012585	smg5	99	65.019	Esox_lucius
ENSOGAG00000004966	SMG5	100	93.412	ENSFCAG00000011783	SMG5	100	93.307	Felis_catus
ENSOGAG00000004966	SMG5	58	81.469	ENSFALG00000001166	-	99	81.575	Ficedula_albicollis
ENSOGAG00000004966	SMG5	98	92.346	ENSFDAG00000017388	SMG5	100	92.246	Fukomys_damarensis
ENSOGAG00000004966	SMG5	97	61.794	ENSFHEG00000013939	smg5	95	67.093	Fundulus_heteroclitus
ENSOGAG00000004966	SMG5	99	60.889	ENSGMOG00000007310	smg5	92	74.769	Gadus_morhua
ENSOGAG00000004966	SMG5	99	76.953	ENSGALG00000029918	-	100	76.667	Gallus_gallus
ENSOGAG00000004966	SMG5	50	52.281	ENSGAFG00000021691	smg5	95	65.815	Gambusia_affinis
ENSOGAG00000004966	SMG5	100	78.632	ENSGAGG00000016131	SMG5	100	78.538	Gopherus_agassizii
ENSOGAG00000004966	SMG5	100	95.079	ENSGGOG00000010932	SMG5	100	95.079	Gorilla_gorilla
ENSOGAG00000004966	SMG5	99	64.293	ENSHBUG00000008654	smg5	99	64.183	Haplochromis_burtoni
ENSOGAG00000004966	SMG5	100	91.749	ENSHGLG00000019152	SMG5	100	91.945	Heterocephalus_glaber_female
ENSOGAG00000004966	SMG5	90	91.996	ENSHGLG00100015948	SMG5	99	92.215	Heterocephalus_glaber_male
ENSOGAG00000004966	SMG5	86	72.705	ENSHCOG00000010229	smg5	92	72.727	Hippocampus_comes
ENSOGAG00000004966	SMG5	50	58.333	ENSIPUG00000006624	Smg5	99	62.066	Ictalurus_punctatus
ENSOGAG00000004966	SMG5	100	94.587	ENSSTOG00000001780	SMG5	100	94.587	Ictidomys_tridecemlineatus
ENSOGAG00000004966	SMG5	100	92.149	ENSJJAG00000022763	Smg5	100	91.364	Jaculus_jaculus
ENSOGAG00000004966	SMG5	50	58.425	ENSKMAG00000014586	smg5	99	60.393	Kryptolebias_marmoratus
ENSOGAG00000004966	SMG5	99	65.440	ENSLBEG00000002145	smg5	99	64.660	Labrus_bergylta
ENSOGAG00000004966	SMG5	100	63.765	ENSLACG00000010521	SMG5	100	63.714	Latimeria_chalumnae
ENSOGAG00000004966	SMG5	95	79.524	ENSLOCG00000008380	smg5	92	79.469	Lepisosteus_oculatus
ENSOGAG00000004966	SMG5	100	93.307	ENSLAFG00000006241	SMG5	100	93.307	Loxodonta_africana
ENSOGAG00000004966	SMG5	100	95.177	ENSMFAG00000045357	SMG5	100	95.177	Macaca_fascicularis
ENSOGAG00000004966	SMG5	100	95.177	ENSMMUG00000000090	SMG5	100	95.177	Macaca_mulatta
ENSOGAG00000004966	SMG5	100	95.079	ENSMNEG00000044425	SMG5	100	95.079	Macaca_nemestrina
ENSOGAG00000004966	SMG5	100	89.020	ENSMLEG00000041192	SMG5	100	89.020	Mandrillus_leucophaeus
ENSOGAG00000004966	SMG5	99	60.555	ENSMAMG00000010683	smg5	58	54.797	Mastacembelus_armatus
ENSOGAG00000004966	SMG5	99	63.330	ENSMZEG00005015815	smg5	99	63.208	Maylandia_zebra
ENSOGAG00000004966	SMG5	63	58.182	ENSMZEG00005016543	smg5	100	58.522	Maylandia_zebra
ENSOGAG00000004966	SMG5	100	90.373	ENSMAUG00000010381	Smg5	100	90.177	Mesocricetus_auratus
ENSOGAG00000004966	SMG5	55	45.280	ENSMAUG00000000043	-	96	44.522	Mesocricetus_auratus
ENSOGAG00000004966	SMG5	100	95.768	ENSMICG00000002257	SMG5	100	95.768	Microcebus_murinus
ENSOGAG00000004966	SMG5	100	90.784	ENSMOCG00000016590	Smg5	100	90.294	Microtus_ochrogaster
ENSOGAG00000004966	SMG5	99	58.363	ENSMMOG00000017199	smg5	99	58.797	Mola_mola
ENSOGAG00000004966	SMG5	75	39.108	ENSMODG00000004735	-	86	39.200	Monodelphis_domestica
ENSOGAG00000004966	SMG5	77	37.438	ENSMODG00000010675	-	85	37.337	Monodelphis_domestica
ENSOGAG00000004966	SMG5	93	35.610	ENSMODG00000004532	-	84	37.783	Monodelphis_domestica
ENSOGAG00000004966	SMG5	97	34.791	ENSMODG00000004511	-	99	34.064	Monodelphis_domestica
ENSOGAG00000004966	SMG5	87	88.964	ENSMODG00000016901	SMG5	98	89.414	Monodelphis_domestica
ENSOGAG00000004966	SMG5	99	59.750	ENSMALG00000010375	smg5	55	53.896	Monopterus_albus
ENSOGAG00000004966	SMG5	100	91.159	MGP_CAROLIEiJ_G0025163	Smg5	100	98.324	Mus_caroli
ENSOGAG00000004966	SMG5	100	91.356	ENSMUSG00000001415	Smg5	99	98.324	Mus_musculus
ENSOGAG00000004966	SMG5	100	91.364	MGP_PahariEiJ_G0026606	Smg5	100	98.324	Mus_pahari
ENSOGAG00000004966	SMG5	100	91.159	MGP_SPRETEiJ_G0026104	Smg5	100	98.324	Mus_spretus
ENSOGAG00000004966	SMG5	94	92.632	ENSMPUG00000004546	SMG5	100	92.000	Mustela_putorius_furo
ENSOGAG00000004966	SMG5	100	92.759	ENSMLUG00000008518	SMG5	100	91.879	Myotis_lucifugus
ENSOGAG00000004966	SMG5	100	92.724	ENSNGAG00000020706	Smg5	100	92.429	Nannospalax_galili
ENSOGAG00000004966	SMG5	98	44.112	ENSNGAG00000012101	-	98	44.048	Nannospalax_galili
ENSOGAG00000004966	SMG5	96	63.535	ENSNBRG00000004332	smg5	98	64.048	Neolamprologus_brichardi
ENSOGAG00000004966	SMG5	100	94.980	ENSNLEG00000012439	SMG5	100	94.980	Nomascus_leucogenys
ENSOGAG00000004966	SMG5	100	87.119	ENSMEUG00000012834	SMG5	100	87.512	Notamacropus_eugenii
ENSOGAG00000004966	SMG5	100	92.717	ENSOPRG00000009152	SMG5	100	92.717	Ochotona_princeps
ENSOGAG00000004966	SMG5	100	94.390	ENSODEG00000012237	SMG5	100	94.390	Octodon_degus
ENSOGAG00000004966	SMG5	89	40.372	ENSOCUG00000023338	-	99	40.263	Oryctolagus_cuniculus
ENSOGAG00000004966	SMG5	98	94.254	ENSOCUG00000012886	SMG5	100	94.254	Oryctolagus_cuniculus
ENSOGAG00000004966	SMG5	99	60.000	ENSORLG00000016239	smg5	99	61.421	Oryzias_latipes
ENSOGAG00000004966	SMG5	99	64.453	ENSORLG00020013127	smg5	99	65.524	Oryzias_latipes_hni
ENSOGAG00000004966	SMG5	99	64.362	ENSORLG00015019014	smg5	99	65.430	Oryzias_latipes_hsok
ENSOGAG00000004966	SMG5	82	59.698	ENSOMEG00000021330	smg5	92	59.506	Oryzias_melastigma
ENSOGAG00000004966	SMG5	99	43.774	ENSOARG00000011963	-	99	42.996	Ovis_aries
ENSOGAG00000004966	SMG5	100	94.193	ENSOARG00000005778	SMG5	100	94.193	Ovis_aries
ENSOGAG00000004966	SMG5	100	94.980	ENSPPAG00000011996	SMG5	100	94.980	Pan_paniscus
ENSOGAG00000004966	SMG5	98	93.347	ENSPPRG00000011901	SMG5	100	92.641	Panthera_pardus
ENSOGAG00000004966	SMG5	99	84.921	ENSPTIG00000007892	SMG5	98	85.223	Panthera_tigris_altaica
ENSOGAG00000004966	SMG5	100	95.177	ENSPTRG00000049282	-	100	95.177	Pan_troglodytes
ENSOGAG00000004966	SMG5	100	95.177	ENSPTRG00000023925	SMG5	100	95.177	Pan_troglodytes
ENSOGAG00000004966	SMG5	100	95.276	ENSPANG00000011201	SMG5	100	95.276	Papio_anubis
ENSOGAG00000004966	SMG5	99	64.981	ENSPKIG00000009402	smg5	99	65.490	Paramormyrops_kingsleyae
ENSOGAG00000004966	SMG5	98	79.088	ENSPSIG00000015198	SMG5	100	78.890	Pelodiscus_sinensis
ENSOGAG00000004966	SMG5	99	60.184	ENSPMGG00000010465	smg5	99	59.208	Periophthalmus_magnuspinnatus
ENSOGAG00000004966	SMG5	56	46.235	ENSPEMG00000010022	-	95	44.158	Peromyscus_maniculatus_bairdii
ENSOGAG00000004966	SMG5	100	91.454	ENSPEMG00000001819	Smg5	100	91.159	Peromyscus_maniculatus_bairdii
ENSOGAG00000004966	SMG5	99	49.711	ENSPMAG00000000410	smg5	100	50.048	Petromyzon_marinus
ENSOGAG00000004966	SMG5	100	88.212	ENSPCIG00000018938	SMG5	100	88.605	Phascolarctos_cinereus
ENSOGAG00000004966	SMG5	50	60.037	ENSPFOG00000010191	smg5	99	61.111	Poecilia_formosa
ENSOGAG00000004966	SMG5	50	59.184	ENSPLAG00000009332	smg5	99	61.421	Poecilia_latipinna
ENSOGAG00000004966	SMG5	99	65.481	ENSPMEG00000014105	smg5	99	65.326	Poecilia_mexicana
ENSOGAG00000004966	SMG5	93	69.676	ENSPREG00000017713	smg5	99	60.901	Poecilia_reticulata
ENSOGAG00000004966	SMG5	100	95.276	ENSPPYG00000000723	SMG5	100	95.276	Pongo_abelii
ENSOGAG00000004966	SMG5	75	95.580	ENSPCAG00000008412	SMG5	81	95.580	Procavia_capensis
ENSOGAG00000004966	SMG5	100	95.571	ENSPCOG00000004741	SMG5	100	95.571	Propithecus_coquereli
ENSOGAG00000004966	SMG5	100	84.744	ENSPVAG00000016748	SMG5	100	84.744	Pteropus_vampyrus
ENSOGAG00000004966	SMG5	99	59.419	ENSPNYG00000013397	smg5	99	60.124	Pundamilia_nyererei
ENSOGAG00000004966	SMG5	100	91.454	ENSRNOG00000019590	Smg5	100	91.159	Rattus_norvegicus
ENSOGAG00000004966	SMG5	100	95.177	ENSRBIG00000027428	SMG5	100	95.177	Rhinopithecus_bieti
ENSOGAG00000004966	SMG5	100	95.079	ENSRROG00000030035	SMG5	100	95.079	Rhinopithecus_roxellana
ENSOGAG00000004966	SMG5	100	95.079	ENSSBOG00000033339	SMG5	100	95.079	Saimiri_boliviensis_boliviensis
ENSOGAG00000004966	SMG5	98	87.888	ENSSHAG00000014163	SMG5	100	88.288	Sarcophilus_harrisii
ENSOGAG00000004966	SMG5	88	39.175	ENSSHAG00000000561	-	87	39.633	Sarcophilus_harrisii
ENSOGAG00000004966	SMG5	99	33.692	ENSSHAG00000009572	-	98	32.094	Sarcophilus_harrisii
ENSOGAG00000004966	SMG5	64	40.000	ENSSHAG00000000935	-	92	40.854	Sarcophilus_harrisii
ENSOGAG00000004966	SMG5	99	65.430	ENSSFOG00015024175	smg5	99	65.656	Scleropages_formosus
ENSOGAG00000004966	SMG5	92	71.963	ENSSMAG00000013059	smg5	92	76.905	Scophthalmus_maximus
ENSOGAG00000004966	SMG5	50	59.347	ENSSDUG00000007122	smg5	55	55.663	Seriola_dumerili
ENSOGAG00000004966	SMG5	99	59.947	ENSSLDG00000011418	smg5	96	60.597	Seriola_lalandi_dorsalis
ENSOGAG00000004966	SMG5	90	80.371	ENSSARG00000012484	SMG5	100	79.498	Sorex_araneus
ENSOGAG00000004966	SMG5	94	76.798	ENSSPUG00000002260	SMG5	100	75.785	Sphenodon_punctatus
ENSOGAG00000004966	SMG5	93	74.382	ENSSPAG00000014266	smg5	98	64.272	Stegastes_partitus
ENSOGAG00000004966	SMG5	100	95.571	ENSSSCG00000006490	-	100	95.579	Sus_scrofa
ENSOGAG00000004966	SMG5	99	72.808	ENSSSCG00000039308	-	100	73.793	Sus_scrofa
ENSOGAG00000004966	SMG5	53	37.705	ENSSSCG00000037182	-	65	41.772	Sus_scrofa
ENSOGAG00000004966	SMG5	99	79.327	ENSTGUG00000003748	-	100	79.199	Taeniopygia_guttata
ENSOGAG00000004966	SMG5	99	64.376	ENSTRUG00000012580	smg5	92	75.294	Takifugu_rubripes
ENSOGAG00000004966	SMG5	99	65.116	ENSTNIG00000010303	smg5	99	64.689	Tetraodon_nigroviridis
ENSOGAG00000004966	SMG5	60	99.507	ENSTBEG00000002777	SMG5	60	99.507	Tupaia_belangeri
ENSOGAG00000004966	SMG5	100	89.961	ENSTTRG00000001401	SMG5	100	89.961	Tursiops_truncatus
ENSOGAG00000004966	SMG5	100	93.012	ENSUAMG00000013721	SMG5	100	92.421	Ursus_americanus
ENSOGAG00000004966	SMG5	98	88.945	ENSUMAG00000018041	SMG5	97	88.342	Ursus_maritimus
ENSOGAG00000004966	SMG5	98	85.267	ENSVPAG00000009446	SMG5	99	85.267	Vicugna_pacos
ENSOGAG00000004966	SMG5	100	93.996	ENSVVUG00000005887	SMG5	100	93.406	Vulpes_vulpes
ENSOGAG00000004966	SMG5	77	64.943	ENSXETG00000033791	SMG5	99	64.439	Xenopus_tropicalis
ENSOGAG00000004966	SMG5	99	65.470	ENSXMAG00000013499	smg5	99	65.121	Xiphophorus_maculatus