EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000005275 (Gene tree)
Gene ID: 100954186
Gene Symbol: SNRNP48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 18829 bases
Position: chrGL873545.1:4603633-4622461
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000004722	zf-U11-48K	PF05253.12	9.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000005282	SNRNP48-201	990	-	ENSOGAP00000004722	330 (aa)	-	H0WRQ8

Gene Model

Click here to download ENSOGAG00000005275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000005275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000005275	SNRNP48	96	92.744	ENSG00000168566	SNRNP48	92	92.605	Homo_sapiens
ENSOGAG00000005275	SNRNP48	82	46.975	ENSAPOG00000021430	snrnp48	82	47.038	Acanthochromis_polyacanthus
ENSOGAG00000005275	SNRNP48	96	87.423	ENSAMEG00000017349	SNRNP48	92	87.500	Ailuropoda_melanoleuca
ENSOGAG00000005275	SNRNP48	97	42.424	ENSACIG00000002032	snrnp48	95	41.846	Amphilophus_citrinellus
ENSOGAG00000005275	SNRNP48	82	46.975	ENSAOCG00000010562	snrnp48	82	46.713	Amphiprion_ocellaris
ENSOGAG00000005275	SNRNP48	82	47.312	ENSAPEG00000003231	snrnp48	82	47.018	Amphiprion_percula
ENSOGAG00000005275	SNRNP48	82	48.410	ENSATEG00000020210	snrnp48	80	49.462	Anabas_testudineus
ENSOGAG00000005275	SNRNP48	81	62.718	ENSACAG00000002811	SNRNP48	88	63.345	Anolis_carolinensis
ENSOGAG00000005275	SNRNP48	96	92.114	ENSANAG00000033538	SNRNP48	92	91.961	Aotus_nancymaae
ENSOGAG00000005275	SNRNP48	95	45.652	ENSAMXG00000015309	snrnp48	83	47.535	Astyanax_mexicanus
ENSOGAG00000005275	SNRNP48	92	85.621	ENSBTAG00000001123	SNRNP48	92	85.897	Bos_taurus
ENSOGAG00000005275	SNRNP48	96	91.509	ENSCJAG00000021330	SNRNP48	92	91.346	Callithrix_jacchus
ENSOGAG00000005275	SNRNP48	96	89.274	ENSCAFG00000009574	SNRNP48	77	89.068	Canis_familiaris
ENSOGAG00000005275	SNRNP48	96	89.590	ENSCAFG00020013203	SNRNP48	91	89.389	Canis_lupus_dingo
ENSOGAG00000005275	SNRNP48	92	87.255	ENSCHIG00000015216	SNRNP48	92	87.500	Capra_hircus
ENSOGAG00000005275	SNRNP48	96	90.190	ENSTSYG00000000698	SNRNP48	91	90.000	Carlito_syrichta
ENSOGAG00000005275	SNRNP48	88	84.642	ENSCAPG00000006768	SNRNP48	93	84.615	Cavia_aperea
ENSOGAG00000005275	SNRNP48	96	86.435	ENSCPOG00000007910	SNRNP48	91	86.452	Cavia_porcellus
ENSOGAG00000005275	SNRNP48	96	90.536	ENSCCAG00000035652	SNRNP48	92	90.354	Cebus_capucinus
ENSOGAG00000005275	SNRNP48	96	91.798	ENSCATG00000033947	SNRNP48	92	91.640	Cercocebus_atys
ENSOGAG00000005275	SNRNP48	96	87.066	ENSCLAG00000003765	SNRNP48	92	86.817	Chinchilla_lanigera
ENSOGAG00000005275	SNRNP48	96	92.744	ENSCSAG00000007409	SNRNP48	92	92.605	Chlorocebus_sabaeus
ENSOGAG00000005275	SNRNP48	84	63.605	ENSCPBG00000019146	SNRNP48	88	64.085	Chrysemys_picta_bellii
ENSOGAG00000005275	SNRNP48	96	92.429	ENSCANG00000030017	SNRNP48	92	92.283	Colobus_angolensis_palliatus
ENSOGAG00000005275	SNRNP48	96	87.066	ENSCGRG00001001076	-	91	87.255	Cricetulus_griseus_chok1gshd
ENSOGAG00000005275	SNRNP48	90	70.134	ENSCGRG00001008805	-	84	69.338	Cricetulus_griseus_chok1gshd
ENSOGAG00000005275	SNRNP48	96	87.066	ENSCGRG00000007781	Snrnp48	91	87.255	Cricetulus_griseus_crigri
ENSOGAG00000005275	SNRNP48	96	41.945	ENSCSEG00000000722	snrnp48	91	41.441	Cynoglossus_semilaevis
ENSOGAG00000005275	SNRNP48	90	45.016	ENSCVAG00000019829	snrnp48	90	41.389	Cyprinodon_variegatus
ENSOGAG00000005275	SNRNP48	98	41.176	ENSDARG00000039989	snrnp48	98	41.471	Danio_rerio
ENSOGAG00000005275	SNRNP48	97	87.578	ENSDNOG00000014978	SNRNP48	93	87.658	Dasypus_novemcinctus
ENSOGAG00000005275	SNRNP48	96	86.792	ENSDORG00000015140	Snrnp48	92	86.538	Dipodomys_ordii
ENSOGAG00000005275	SNRNP48	96	91.167	ENSEASG00005012021	SNRNP48	92	90.997	Equus_asinus_asinus
ENSOGAG00000005275	SNRNP48	96	91.483	ENSECAG00000026937	SNRNP48	92	91.318	Equus_caballus
ENSOGAG00000005275	SNRNP48	93	67.752	ENSEEUG00000015437	SNRNP48	90	67.752	Erinaceus_europaeus
ENSOGAG00000005275	SNRNP48	93	46.519	ENSELUG00000009766	snrnp48	80	47.603	Esox_lucius
ENSOGAG00000005275	SNRNP48	96	91.167	ENSFCAG00000018853	SNRNP48	92	90.997	Felis_catus
ENSOGAG00000005275	SNRNP48	82	61.301	ENSFALG00000007797	SNRNP48	88	63.768	Ficedula_albicollis
ENSOGAG00000005275	SNRNP48	96	87.382	ENSFDAG00000009231	SNRNP48	92	87.138	Fukomys_damarensis
ENSOGAG00000005275	SNRNP48	61	55.665	ENSFHEG00000014647	snrnp48	82	51.883	Fundulus_heteroclitus
ENSOGAG00000005275	SNRNP48	75	47.619	ENSGMOG00000018599	-	87	45.993	Gadus_morhua
ENSOGAG00000005275	SNRNP48	81	64.413	ENSGALG00000013005	SNRNP48	93	64.388	Gallus_gallus
ENSOGAG00000005275	SNRNP48	95	43.478	ENSGAFG00000021639	snrnp48	92	43.478	Gambusia_affinis
ENSOGAG00000005275	SNRNP48	76	49.020	ENSGACG00000017756	-	87	47.000	Gasterosteus_aculeatus
ENSOGAG00000005275	SNRNP48	84	61.905	ENSGAGG00000000865	SNRNP48	92	62.324	Gopherus_agassizii
ENSOGAG00000005275	SNRNP48	96	92.744	ENSGGOG00000013220	SNRNP48	92	92.605	Gorilla_gorilla
ENSOGAG00000005275	SNRNP48	96	41.818	ENSHBUG00000017066	snrnp48	94	42.121	Haplochromis_burtoni
ENSOGAG00000005275	SNRNP48	96	87.697	ENSHGLG00000015241	SNRNP48	92	87.460	Heterocephalus_glaber_female
ENSOGAG00000005275	SNRNP48	96	87.697	ENSHGLG00100010027	SNRNP48	92	87.460	Heterocephalus_glaber_male
ENSOGAG00000005275	SNRNP48	76	44.882	ENSHCOG00000014066	snrnp48	82	42.907	Hippocampus_comes
ENSOGAG00000005275	SNRNP48	96	91.798	ENSSTOG00000014635	SNRNP48	92	91.640	Ictidomys_tridecemlineatus
ENSOGAG00000005275	SNRNP48	96	83.281	ENSJJAG00000011495	Snrnp48	92	82.958	Jaculus_jaculus
ENSOGAG00000005275	SNRNP48	91	44.079	ENSKMAG00000016514	snrnp48	82	44.792	Kryptolebias_marmoratus
ENSOGAG00000005275	SNRNP48	79	49.430	ENSLBEG00000026249	snrnp48	83	48.443	Labrus_bergylta
ENSOGAG00000005275	SNRNP48	97	52.308	ENSLACG00000003958	SNRNP48	94	51.368	Latimeria_chalumnae
ENSOGAG00000005275	SNRNP48	87	48.805	ENSLOCG00000004187	snrnp48	90	46.729	Lepisosteus_oculatus
ENSOGAG00000005275	SNRNP48	96	87.066	ENSLAFG00000011152	SNRNP48	92	86.817	Loxodonta_africana
ENSOGAG00000005275	SNRNP48	96	92.744	ENSMFAG00000045216	SNRNP48	92	92.605	Macaca_fascicularis
ENSOGAG00000005275	SNRNP48	96	92.744	ENSMMUG00000014785	SNRNP48	92	92.605	Macaca_mulatta
ENSOGAG00000005275	SNRNP48	96	92.429	ENSMNEG00000042269	SNRNP48	92	92.283	Macaca_nemestrina
ENSOGAG00000005275	SNRNP48	96	92.744	ENSMLEG00000034004	SNRNP48	92	92.605	Mandrillus_leucophaeus
ENSOGAG00000005275	SNRNP48	79	48.485	ENSMAMG00000018673	snrnp48	72	48.070	Mastacembelus_armatus
ENSOGAG00000005275	SNRNP48	82	64.561	ENSMGAG00000006037	SNRNP48	93	64.835	Meleagris_gallopavo
ENSOGAG00000005275	SNRNP48	96	86.751	ENSMAUG00000011944	Snrnp48	91	86.928	Mesocricetus_auratus
ENSOGAG00000005275	SNRNP48	96	92.429	ENSMICG00000012497	SNRNP48	92	92.283	Microcebus_murinus
ENSOGAG00000005275	SNRNP48	96	86.751	ENSMOCG00000015555	Snrnp48	91	86.928	Microtus_ochrogaster
ENSOGAG00000005275	SNRNP48	55	52.151	ENSMMOG00000003072	-	58	52.151	Mola_mola
ENSOGAG00000005275	SNRNP48	86	70.270	ENSMODG00000009996	SNRNP48	87	69.782	Monodelphis_domestica
ENSOGAG00000005275	SNRNP48	78	49.807	ENSMALG00000005725	snrnp48	81	47.552	Monopterus_albus
ENSOGAG00000005275	SNRNP48	96	85.804	MGP_CAROLIEiJ_G0018441	Snrnp48	91	86.557	Mus_caroli
ENSOGAG00000005275	SNRNP48	98	83.851	ENSMUSG00000021431	Snrnp48	92	84.516	Mus_musculus
ENSOGAG00000005275	SNRNP48	96	85.489	MGP_PahariEiJ_G0019509	Snrnp48	91	86.230	Mus_pahari
ENSOGAG00000005275	SNRNP48	96	84.227	MGP_SPRETEiJ_G0019321	Snrnp48	91	84.918	Mus_spretus
ENSOGAG00000005275	SNRNP48	96	86.435	ENSNGAG00000004849	Snrnp48	91	86.774	Nannospalax_galili
ENSOGAG00000005275	SNRNP48	76	47.638	ENSNBRG00000012127	snrnp48	81	45.645	Neolamprologus_brichardi
ENSOGAG00000005275	SNRNP48	96	93.060	ENSNLEG00000011667	SNRNP48	92	92.926	Nomascus_leucogenys
ENSOGAG00000005275	SNRNP48	96	79.180	ENSOPRG00000015471	SNRNP48	97	78.846	Ochotona_princeps
ENSOGAG00000005275	SNRNP48	76	48.031	ENSONIG00000001520	snrnp48	81	45.993	Oreochromis_niloticus
ENSOGAG00000005275	SNRNP48	58	61.951	ENSOANG00000019888	-	99	62.927	Ornithorhynchus_anatinus
ENSOGAG00000005275	SNRNP48	86	89.123	ENSOCUG00000005168	SNRNP48	98	88.552	Oryctolagus_cuniculus
ENSOGAG00000005275	SNRNP48	90	46.732	ENSORLG00000015654	snrnp48	81	47.569	Oryzias_latipes
ENSOGAG00000005275	SNRNP48	90	45.425	ENSORLG00020015976	snrnp48	69	46.528	Oryzias_latipes_hni
ENSOGAG00000005275	SNRNP48	90	46.405	ENSORLG00015022379	snrnp48	70	47.569	Oryzias_latipes_hsok
ENSOGAG00000005275	SNRNP48	85	46.552	ENSOMEG00000022007	snrnp48	83	47.241	Oryzias_melastigma
ENSOGAG00000005275	SNRNP48	82	89.668	ENSOARG00000017319	SNRNP48	93	89.474	Ovis_aries
ENSOGAG00000005275	SNRNP48	96	93.060	ENSPPAG00000032873	SNRNP48	92	92.926	Pan_paniscus
ENSOGAG00000005275	SNRNP48	96	91.483	ENSPPRG00000004283	SNRNP48	92	91.318	Panthera_pardus
ENSOGAG00000005275	SNRNP48	82	93.750	ENSPTIG00000013502	SNRNP48	93	93.609	Panthera_tigris_altaica
ENSOGAG00000005275	SNRNP48	96	93.060	ENSPTRG00000017703	SNRNP48	92	92.926	Pan_troglodytes
ENSOGAG00000005275	SNRNP48	96	92.744	ENSPANG00000000771	SNRNP48	92	92.605	Papio_anubis
ENSOGAG00000005275	SNRNP48	95	44.706	ENSPKIG00000013703	snrnp48	59	48.951	Paramormyrops_kingsleyae
ENSOGAG00000005275	SNRNP48	84	60.751	ENSPSIG00000002213	SNRNP48	88	62.057	Pelodiscus_sinensis
ENSOGAG00000005275	SNRNP48	74	48.571	ENSPMGG00000008120	snrnp48	89	47.266	Periophthalmus_magnuspinnatus
ENSOGAG00000005275	SNRNP48	96	87.066	ENSPEMG00000008872	Snrnp48	91	87.255	Peromyscus_maniculatus_bairdii
ENSOGAG00000005275	SNRNP48	84	50.000	ENSPFOG00000003578	snrnp48	76	50.000	Poecilia_formosa
ENSOGAG00000005275	SNRNP48	69	50.870	ENSPLAG00000002290	snrnp48	77	50.870	Poecilia_latipinna
ENSOGAG00000005275	SNRNP48	84	49.286	ENSPMEG00000018033	snrnp48	76	49.286	Poecilia_mexicana
ENSOGAG00000005275	SNRNP48	74	51.012	ENSPREG00000018541	snrnp48	80	48.763	Poecilia_reticulata
ENSOGAG00000005275	SNRNP48	96	91.798	ENSPPYG00000016209	SNRNP48	92	91.640	Pongo_abelii
ENSOGAG00000005275	SNRNP48	75	69.355	ENSPCAG00000011991	SNRNP48	97	69.615	Procavia_capensis
ENSOGAG00000005275	SNRNP48	96	89.590	ENSPVAG00000002854	SNRNP48	92	89.389	Pteropus_vampyrus
ENSOGAG00000005275	SNRNP48	76	48.425	ENSPNYG00000015399	snrnp48	89	46.341	Pundamilia_nyererei
ENSOGAG00000005275	SNRNP48	96	86.120	ENSRNOG00000013756	Snrnp48	91	87.213	Rattus_norvegicus
ENSOGAG00000005275	SNRNP48	92	92.079	ENSRBIG00000043856	SNRNP48	95	92.667	Rhinopithecus_bieti
ENSOGAG00000005275	SNRNP48	96	92.429	ENSRROG00000043229	SNRNP48	92	92.283	Rhinopithecus_roxellana
ENSOGAG00000005275	SNRNP48	96	92.114	ENSSBOG00000019486	SNRNP48	92	91.961	Saimiri_boliviensis_boliviensis
ENSOGAG00000005275	SNRNP48	86	69.932	ENSSHAG00000014483	SNRNP48	92	69.688	Sarcophilus_harrisii
ENSOGAG00000005275	SNRNP48	78	48.881	ENSSFOG00015006610	snrnp48	75	44.643	Scleropages_formosus
ENSOGAG00000005275	SNRNP48	90	44.816	ENSSDUG00000014953	snrnp48	82	46.367	Seriola_dumerili
ENSOGAG00000005275	SNRNP48	84	46.713	ENSSLDG00000005989	snrnp48	82	46.713	Seriola_lalandi_dorsalis
ENSOGAG00000005275	SNRNP48	78	65.926	ENSSPUG00000006257	SNRNP48	80	63.929	Sphenodon_punctatus
ENSOGAG00000005275	SNRNP48	83	46.996	ENSSPAG00000006454	snrnp48	83	46.367	Stegastes_partitus
ENSOGAG00000005275	SNRNP48	83	62.544	ENSTGUG00000007575	SNRNP48	88	63.370	Taeniopygia_guttata
ENSOGAG00000005275	SNRNP48	76	47.826	ENSTRUG00000007031	snrnp48	80	48.000	Takifugu_rubripes
ENSOGAG00000005275	SNRNP48	77	44.922	ENSTNIG00000012977	-	75	44.922	Tetraodon_nigroviridis
ENSOGAG00000005275	SNRNP48	78	87.984	ENSTBEG00000015620	SNRNP48	76	87.984	Tupaia_belangeri
ENSOGAG00000005275	SNRNP48	92	89.180	ENSTTRG00000016715	SNRNP48	92	88.424	Tursiops_truncatus
ENSOGAG00000005275	SNRNP48	96	89.905	ENSUAMG00000003690	SNRNP48	92	90.032	Ursus_americanus
ENSOGAG00000005275	SNRNP48	80	89.015	ENSVPAG00000003557	SNRNP48	93	88.722	Vicugna_pacos
ENSOGAG00000005275	SNRNP48	96	89.873	ENSVVUG00000004996	SNRNP48	91	89.677	Vulpes_vulpes
ENSOGAG00000005275	SNRNP48	88	52.632	ENSXETG00000020447	snrnp48	89	52.229	Xenopus_tropicalis
ENSOGAG00000005275	SNRNP48	69	50.216	ENSXCOG00000004478	snrnp48	69	50.216	Xiphophorus_couchianus
ENSOGAG00000005275	SNRNP48	84	49.286	ENSXMAG00000013595	snrnp48	76	49.286	Xiphophorus_maculatus