EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000005627 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 25839 bases
Position: chrGL873529.1:9471322-9497160
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000005029	RTC	PF01137.21	2e-66	1	1
ENSOGAP00000005029	RTC_insert	PF05189.13	9.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000005628	RTCA-201	1098	-	ENSOGAP00000005029	365 (aa)	-	H0WSG8

Gene Model

Click here to download ENSOGAG00000005627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000005627's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000005627	RTCA	100	85.246	ENSG00000137996	RTCA	98	93.750	Homo_sapiens
ENSOGAG00000005627	RTCA	100	64.754	ENSAPOG00000001345	rtca	99	64.754	Acanthochromis_polyacanthus
ENSOGAG00000005627	RTCA	74	94.796	ENSAMEG00000008855	RTCA	100	94.796	Ailuropoda_melanoleuca
ENSOGAG00000005627	RTCA	99	65.928	ENSACIG00000019643	rtca	99	65.928	Amphilophus_citrinellus
ENSOGAG00000005627	RTCA	100	64.481	ENSAOCG00000014979	rtca	99	64.481	Amphiprion_ocellaris
ENSOGAG00000005627	RTCA	100	64.481	ENSAPEG00000006945	rtca	99	64.481	Amphiprion_percula
ENSOGAG00000005627	RTCA	96	65.242	ENSATEG00000006315	rtca	96	65.242	Anabas_testudineus
ENSOGAG00000005627	RTCA	96	71.751	ENSAPLG00000015430	RTCA	100	71.751	Anas_platyrhynchos
ENSOGAG00000005627	RTCA	100	84.973	ENSANAG00000025446	RTCA	100	84.973	Aotus_nancymaae
ENSOGAG00000005627	RTCA	100	64.754	ENSACLG00000020770	rtca	99	64.754	Astatotilapia_calliptera
ENSOGAG00000005627	RTCA	100	65.847	ENSAMXG00000043271	rtca	100	65.847	Astyanax_mexicanus
ENSOGAG00000005627	RTCA	100	85.519	ENSBTAG00000006321	RTCA	100	85.519	Bos_taurus
ENSOGAG00000005627	RTCA	100	85.246	ENSCJAG00000003398	RTCA	100	85.246	Callithrix_jacchus
ENSOGAG00000005627	RTCA	100	86.066	ENSCAFG00000020010	RTCA	68	86.066	Canis_familiaris
ENSOGAG00000005627	RTCA	100	86.066	ENSCAFG00020011528	RTCA	57	86.066	Canis_lupus_dingo
ENSOGAG00000005627	RTCA	100	85.246	ENSCHIG00000018937	RTCA	100	85.246	Capra_hircus
ENSOGAG00000005627	RTCA	100	84.153	ENSTSYG00000011305	RTCA	100	84.153	Carlito_syrichta
ENSOGAG00000005627	RTCA	100	84.426	ENSCCAG00000021844	RTCA	100	84.426	Cebus_capucinus
ENSOGAG00000005627	RTCA	100	82.850	ENSCATG00000019364	RTCA	99	86.688	Cercocebus_atys
ENSOGAG00000005627	RTCA	85	85.852	ENSCLAG00000006125	RTCA	98	85.852	Chinchilla_lanigera
ENSOGAG00000005627	RTCA	100	85.792	ENSCSAG00000001509	RTCA	100	85.792	Chlorocebus_sabaeus
ENSOGAG00000005627	RTCA	100	84.699	ENSCHOG00000005211	RTCA	100	84.699	Choloepus_hoffmanni
ENSOGAG00000005627	RTCA	100	74.863	ENSCPBG00000026658	RTCA	100	74.863	Chrysemys_picta_bellii
ENSOGAG00000005627	RTCA	99	51.233	ENSCING00000007875	-	99	51.233	Ciona_intestinalis
ENSOGAG00000005627	RTCA	99	50.137	ENSCSAVG00000007269	-	99	50.137	Ciona_savignyi
ENSOGAG00000005627	RTCA	100	85.519	ENSCANG00000040106	RTCA	100	85.519	Colobus_angolensis_palliatus
ENSOGAG00000005627	RTCA	76	88.929	ENSCGRG00001013163	Rtca	89	88.929	Cricetulus_griseus_chok1gshd
ENSOGAG00000005627	RTCA	99	63.562	ENSCSEG00000000530	rtca	98	63.562	Cynoglossus_semilaevis
ENSOGAG00000005627	RTCA	100	59.946	ENSCVAG00000021809	rtca	100	59.946	Cyprinodon_variegatus
ENSOGAG00000005627	RTCA	100	67.213	ENSDARG00000002215	rtca	100	67.213	Danio_rerio
ENSOGAG00000005627	RTCA	100	84.973	ENSDNOG00000000456	RTCA	100	84.973	Dasypus_novemcinctus
ENSOGAG00000005627	RTCA	100	84.426	ENSDORG00000005448	Rtca	100	84.426	Dipodomys_ordii
ENSOGAG00000005627	RTCA	99	36.740	FBgn0025630	Rtca	99	36.740	Drosophila_melanogaster
ENSOGAG00000005627	RTCA	95	49.311	ENSEBUG00000008556	rtca	97	49.311	Eptatretus_burgeri
ENSOGAG00000005627	RTCA	100	84.973	ENSEASG00005015926	RTCA	100	84.973	Equus_asinus_asinus
ENSOGAG00000005627	RTCA	100	84.973	ENSECAG00000019831	RTCA	100	84.973	Equus_caballus
ENSOGAG00000005627	RTCA	91	74.277	ENSEEUG00000001165	RTCA	100	74.277	Erinaceus_europaeus
ENSOGAG00000005627	RTCA	99	65.928	ENSELUG00000003741	rtca	99	65.928	Esox_lucius
ENSOGAG00000005627	RTCA	100	86.066	ENSFCAG00000024460	RTCA	100	86.066	Felis_catus
ENSOGAG00000005627	RTCA	93	72.941	ENSFALG00000002443	RTCA	91	72.941	Ficedula_albicollis
ENSOGAG00000005627	RTCA	100	84.699	ENSFDAG00000012070	-	100	84.699	Fukomys_damarensis
ENSOGAG00000005627	RTCA	98	63.812	ENSFDAG00000016084	-	100	63.812	Fukomys_damarensis
ENSOGAG00000005627	RTCA	55	74.500	ENSFHEG00000002868	rtca	90	72.115	Fundulus_heteroclitus
ENSOGAG00000005627	RTCA	100	63.388	ENSGMOG00000013264	rtca	100	63.388	Gadus_morhua
ENSOGAG00000005627	RTCA	100	74.590	ENSGALG00000005277	RTCA	100	74.590	Gallus_gallus
ENSOGAG00000005627	RTCA	100	66.393	ENSGAFG00000011853	rtca	99	66.393	Gambusia_affinis
ENSOGAG00000005627	RTCA	100	63.388	ENSGACG00000013497	rtca	100	63.388	Gasterosteus_aculeatus
ENSOGAG00000005627	RTCA	80	72.696	ENSGAGG00000023306	RTCA	100	72.696	Gopherus_agassizii
ENSOGAG00000005627	RTCA	100	85.246	ENSGGOG00000009546	-	100	85.246	Gorilla_gorilla
ENSOGAG00000005627	RTCA	100	84.699	ENSGGOG00000044018	-	100	84.699	Gorilla_gorilla
ENSOGAG00000005627	RTCA	100	64.754	ENSHBUG00000002114	rtca	99	64.754	Haplochromis_burtoni
ENSOGAG00000005627	RTCA	100	84.153	ENSHGLG00000002617	RTCA	100	84.153	Heterocephalus_glaber_female
ENSOGAG00000005627	RTCA	100	84.153	ENSHGLG00100006056	RTCA	100	84.153	Heterocephalus_glaber_male
ENSOGAG00000005627	RTCA	100	57.923	ENSHCOG00000020628	rtca	89	57.923	Hippocampus_comes
ENSOGAG00000005627	RTCA	100	66.393	ENSIPUG00000024803	rtca	100	66.393	Ictalurus_punctatus
ENSOGAG00000005627	RTCA	100	79.235	ENSSTOG00000013528	-	100	79.292	Ictidomys_tridecemlineatus
ENSOGAG00000005627	RTCA	100	74.932	ENSSTOG00000033099	-	100	74.932	Ictidomys_tridecemlineatus
ENSOGAG00000005627	RTCA	100	59.563	ENSJJAG00000016178	Rtca	100	59.563	Jaculus_jaculus
ENSOGAG00000005627	RTCA	99	67.036	ENSKMAG00000006651	rtca	98	67.036	Kryptolebias_marmoratus
ENSOGAG00000005627	RTCA	99	63.712	ENSLBEG00000028971	rtca	99	63.712	Labrus_bergylta
ENSOGAG00000005627	RTCA	84	64.918	ENSLBEG00000002448	-	94	64.918	Labrus_bergylta
ENSOGAG00000005627	RTCA	100	70.492	ENSLACG00000013666	RTCA	100	70.492	Latimeria_chalumnae
ENSOGAG00000005627	RTCA	100	65.574	ENSLOCG00000000093	rtca	99	65.574	Lepisosteus_oculatus
ENSOGAG00000005627	RTCA	100	85.792	ENSLAFG00000001473	RTCA	100	85.792	Loxodonta_africana
ENSOGAG00000005627	RTCA	100	85.792	ENSMFAG00000034132	RTCA	100	85.792	Macaca_fascicularis
ENSOGAG00000005627	RTCA	100	85.246	ENSMMUG00000019105	RTCA	100	85.246	Macaca_mulatta
ENSOGAG00000005627	RTCA	84	86.688	ENSMNEG00000037163	RTCA	99	86.688	Macaca_nemestrina
ENSOGAG00000005627	RTCA	100	75.137	ENSMLEG00000042151	RTCA	100	75.137	Mandrillus_leucophaeus
ENSOGAG00000005627	RTCA	100	66.940	ENSMAMG00000016536	rtca	100	66.940	Mastacembelus_armatus
ENSOGAG00000005627	RTCA	100	64.754	ENSMZEG00005017945	rtca	99	64.754	Maylandia_zebra
ENSOGAG00000005627	RTCA	85	73.312	ENSMGAG00000006892	RTCA	97	73.312	Meleagris_gallopavo
ENSOGAG00000005627	RTCA	100	83.060	ENSMAUG00000008488	Rtca	100	83.060	Mesocricetus_auratus
ENSOGAG00000005627	RTCA	84	88.312	ENSMICG00000008643	RTCA	99	88.312	Microcebus_murinus
ENSOGAG00000005627	RTCA	100	83.880	ENSMOCG00000016660	Rtca	100	83.880	Microtus_ochrogaster
ENSOGAG00000005627	RTCA	84	67.869	ENSMMOG00000007750	rtca	99	67.869	Mola_mola
ENSOGAG00000005627	RTCA	100	81.421	ENSMODG00000003557	RTCA	100	81.421	Monodelphis_domestica
ENSOGAG00000005627	RTCA	100	66.940	ENSMALG00000020844	rtca	100	66.940	Monopterus_albus
ENSOGAG00000005627	RTCA	100	82.514	MGP_CAROLIEiJ_G0025565	Rtca	94	95.918	Mus_caroli
ENSOGAG00000005627	RTCA	100	81.967	ENSMUSG00000000339	Rtca	94	95.918	Mus_musculus
ENSOGAG00000005627	RTCA	100	82.240	MGP_PahariEiJ_G0027011	Rtca	94	95.918	Mus_pahari
ENSOGAG00000005627	RTCA	100	82.240	MGP_SPRETEiJ_G0026515	Rtca	94	95.918	Mus_spretus
ENSOGAG00000005627	RTCA	100	86.066	ENSMPUG00000012119	RTCA	100	86.066	Mustela_putorius_furo
ENSOGAG00000005627	RTCA	100	77.657	ENSMLUG00000009922	RTCA	100	77.657	Myotis_lucifugus
ENSOGAG00000005627	RTCA	100	82.787	ENSNGAG00000011540	Rtca	99	82.787	Nannospalax_galili
ENSOGAG00000005627	RTCA	100	64.754	ENSNBRG00000003062	rtca	99	64.754	Neolamprologus_brichardi
ENSOGAG00000005627	RTCA	100	85.519	ENSNLEG00000031426	RTCA	100	85.519	Nomascus_leucogenys
ENSOGAG00000005627	RTCA	74	87.732	ENSOPRG00000012092	RTCA	71	87.732	Ochotona_princeps
ENSOGAG00000005627	RTCA	95	85.057	ENSODEG00000006990	RTCA	96	85.185	Octodon_degus
ENSOGAG00000005627	RTCA	100	64.754	ENSONIG00000007753	rtca	99	64.754	Oreochromis_niloticus
ENSOGAG00000005627	RTCA	85	79.743	ENSOANG00000012055	RTCA	96	79.743	Ornithorhynchus_anatinus
ENSOGAG00000005627	RTCA	100	86.066	ENSOCUG00000014247	RTCA	100	86.066	Oryctolagus_cuniculus
ENSOGAG00000005627	RTCA	100	65.027	ENSORLG00000013605	rtca	100	65.027	Oryzias_latipes
ENSOGAG00000005627	RTCA	100	65.027	ENSORLG00020001904	rtca	100	65.027	Oryzias_latipes_hni
ENSOGAG00000005627	RTCA	100	65.027	ENSORLG00015021064	rtca	100	65.027	Oryzias_latipes_hsok
ENSOGAG00000005627	RTCA	100	65.847	ENSOMEG00000000756	rtca	100	65.847	Oryzias_melastigma
ENSOGAG00000005627	RTCA	85	84.566	ENSOARG00000018122	RTCA	98	84.566	Ovis_aries
ENSOGAG00000005627	RTCA	100	81.794	ENSPPAG00000035119	RTCA	99	85.714	Pan_paniscus
ENSOGAG00000005627	RTCA	100	85.792	ENSPPRG00000000350	RTCA	100	85.792	Panthera_pardus
ENSOGAG00000005627	RTCA	100	85.792	ENSPTIG00000012816	RTCA	100	85.792	Panthera_tigris_altaica
ENSOGAG00000005627	RTCA	100	81.794	ENSPTRG00000001004	RTCA	99	85.714	Pan_troglodytes
ENSOGAG00000005627	RTCA	100	86.066	ENSPANG00000000346	RTCA	100	86.066	Papio_anubis
ENSOGAG00000005627	RTCA	100	66.393	ENSPKIG00000001653	rtca	100	66.393	Paramormyrops_kingsleyae
ENSOGAG00000005627	RTCA	100	75.410	ENSPSIG00000011408	RTCA	100	75.410	Pelodiscus_sinensis
ENSOGAG00000005627	RTCA	100	83.060	ENSPEMG00000018582	Rtca	100	83.060	Peromyscus_maniculatus_bairdii
ENSOGAG00000005627	RTCA	99	53.039	ENSPMAG00000009110	rtca	98	53.039	Petromyzon_marinus
ENSOGAG00000005627	RTCA	100	81.421	ENSPCIG00000007684	RTCA	100	81.421	Phascolarctos_cinereus
ENSOGAG00000005627	RTCA	100	66.848	ENSPFOG00000004824	rtca	100	66.848	Poecilia_formosa
ENSOGAG00000005627	RTCA	100	66.667	ENSPLAG00000011753	rtca	99	66.667	Poecilia_latipinna
ENSOGAG00000005627	RTCA	100	66.667	ENSPMEG00000020469	rtca	99	66.667	Poecilia_mexicana
ENSOGAG00000005627	RTCA	100	67.760	ENSPREG00000001365	rtca	99	67.760	Poecilia_reticulata
ENSOGAG00000005627	RTCA	100	85.246	ENSPPYG00000001115	RTCA	100	85.246	Pongo_abelii
ENSOGAG00000005627	RTCA	100	81.967	ENSPCAG00000005076	RTCA	100	81.967	Procavia_capensis
ENSOGAG00000005627	RTCA	100	87.978	ENSPCOG00000005603	RTCA	94	97.959	Propithecus_coquereli
ENSOGAG00000005627	RTCA	100	81.530	ENSPVAG00000009478	RTCA	100	81.530	Pteropus_vampyrus
ENSOGAG00000005627	RTCA	100	64.754	ENSPNYG00000004722	rtca	99	64.754	Pundamilia_nyererei
ENSOGAG00000005627	RTCA	100	66.120	ENSPNAG00000022270	rtca	100	66.120	Pygocentrus_nattereri
ENSOGAG00000005627	RTCA	100	82.240	ENSRNOG00000014575	Rtca	100	82.240	Rattus_norvegicus
ENSOGAG00000005627	RTCA	100	82.058	ENSRBIG00000041180	RTCA	99	85.714	Rhinopithecus_bieti
ENSOGAG00000005627	RTCA	100	84.973	ENSRROG00000024929	RTCA	100	84.973	Rhinopithecus_roxellana
ENSOGAG00000005627	RTCA	100	84.426	ENSSBOG00000028626	RTCA	100	84.426	Saimiri_boliviensis_boliviensis
ENSOGAG00000005627	RTCA	100	81.694	ENSSHAG00000001758	RTCA	100	81.694	Sarcophilus_harrisii
ENSOGAG00000005627	RTCA	98	63.333	ENSSMAG00000014680	rtca	97	63.333	Scophthalmus_maximus
ENSOGAG00000005627	RTCA	98	65.556	ENSSDUG00000015585	rtca	97	65.556	Seriola_dumerili
ENSOGAG00000005627	RTCA	96	65.812	ENSSLDG00000018985	rtca	95	65.812	Seriola_lalandi_dorsalis
ENSOGAG00000005627	RTCA	85	77.492	ENSSARG00000013993	RTCA	98	77.492	Sorex_araneus
ENSOGAG00000005627	RTCA	100	64.481	ENSSPAG00000011938	rtca	99	64.481	Stegastes_partitus
ENSOGAG00000005627	RTCA	100	85.519	ENSSSCG00000006865	RTCA	100	85.519	Sus_scrofa
ENSOGAG00000005627	RTCA	100	75.137	ENSTGUG00000005154	RTCA	100	75.137	Taeniopygia_guttata
ENSOGAG00000005627	RTCA	100	66.120	ENSTRUG00000008799	rtca	100	66.120	Takifugu_rubripes
ENSOGAG00000005627	RTCA	100	66.667	ENSTNIG00000004725	rtca	100	66.667	Tetraodon_nigroviridis
ENSOGAG00000005627	RTCA	58	68.067	ENSTBEG00000000943	RTCA	82	68.067	Tupaia_belangeri
ENSOGAG00000005627	RTCA	100	81.530	ENSTTRG00000015327	RTCA	100	81.530	Tursiops_truncatus
ENSOGAG00000005627	RTCA	94	82.507	ENSUAMG00000017265	RTCA	96	82.507	Ursus_americanus
ENSOGAG00000005627	RTCA	100	84.973	ENSUMAG00000007881	RTCA	100	84.973	Ursus_maritimus
ENSOGAG00000005627	RTCA	86	74.841	ENSVPAG00000001039	RTCA	83	74.841	Vicugna_pacos
ENSOGAG00000005627	RTCA	100	85.792	ENSVVUG00000022041	RTCA	68	85.792	Vulpes_vulpes
ENSOGAG00000005627	RTCA	99	57.493	ENSXETG00000031661	RTCA	99	57.493	Xenopus_tropicalis
ENSOGAG00000005627	RTCA	100	57.650	ENSXCOG00000008002	rtca	100	57.650	Xiphophorus_couchianus
ENSOGAG00000005627	RTCA	100	66.940	ENSXMAG00000005482	rtca	99	66.940	Xiphophorus_maculatus