EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000005796 (Gene tree)
Gene ID: 100960042
Gene Symbol: UPF2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 100491 bases
Position: chrGL873538.1:19814910-19915400
Accession: 100960042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000005185	Upf2	PF04050.14	7.5e-33	1	1
ENSOGAP00000005185	MIF4G	PF02854.19	5.9e-81	1	3
ENSOGAP00000005185	MIF4G	PF02854.19	5.9e-81	2	3
ENSOGAP00000005185	MIF4G	PF02854.19	5.9e-81	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000005800	UPF2-201	5199	XM_012803360	ENSOGAP00000005185	1271 (aa)	XP_012658814	H0WSV3

Gene Model

Click here to download ENSOGAG00000005796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000005796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000005796	UPF2	100	98.270	ENSG00000151461	UPF2	100	98.270	Homo_sapiens
ENSOGAG00000005796	UPF2	99	78.387	ENSAPOG00000015837	UPF2	100	78.465	Acanthochromis_polyacanthus
ENSOGAG00000005796	UPF2	100	97.640	ENSAMEG00000004586	UPF2	100	97.640	Ailuropoda_melanoleuca
ENSOGAG00000005796	UPF2	99	82.500	ENSACIG00000018078	UPF2	100	82.969	Amphilophus_citrinellus
ENSOGAG00000005796	UPF2	100	82.683	ENSAOCG00000016766	UPF2	100	83.151	Amphiprion_ocellaris
ENSOGAG00000005796	UPF2	100	82.761	ENSAPEG00000019084	UPF2	100	83.229	Amphiprion_percula
ENSOGAG00000005796	UPF2	100	82.582	ENSATEG00000021677	UPF2	99	83.022	Anabas_testudineus
ENSOGAG00000005796	UPF2	100	86.950	ENSAPLG00000010287	UPF2	91	90.768	Anas_platyrhynchos
ENSOGAG00000005796	UPF2	100	91.896	ENSACAG00000009259	UPF2	100	91.896	Anolis_carolinensis
ENSOGAG00000005796	UPF2	99	88.050	ENSANAG00000028451	UPF2	99	86.871	Aotus_nancymaae
ENSOGAG00000005796	UPF2	100	80.967	ENSACLG00000012696	UPF2	100	83.229	Astatotilapia_calliptera
ENSOGAG00000005796	UPF2	99	82.864	ENSAMXG00000013700	UPF2	99	83.255	Astyanax_mexicanus
ENSOGAG00000005796	UPF2	100	97.718	ENSBTAG00000000288	UPF2	100	97.718	Bos_taurus
ENSOGAG00000005796	UPF2	100	98.349	ENSCJAG00000020685	UPF2	100	98.349	Callithrix_jacchus
ENSOGAG00000005796	UPF2	100	97.797	ENSCAFG00000004839	UPF2	100	97.797	Canis_familiaris
ENSOGAG00000005796	UPF2	99	95.351	ENSCAFG00020005882	UPF2	100	95.351	Canis_lupus_dingo
ENSOGAG00000005796	UPF2	100	97.797	ENSCHIG00000020359	UPF2	100	97.797	Capra_hircus
ENSOGAG00000005796	UPF2	100	97.876	ENSTSYG00000000935	UPF2	100	97.876	Carlito_syrichta
ENSOGAG00000005796	UPF2	91	87.177	ENSCAPG00000016658	UPF2	95	86.736	Cavia_aperea
ENSOGAG00000005796	UPF2	99	94.211	ENSCPOG00000008809	UPF2	99	95.083	Cavia_porcellus
ENSOGAG00000005796	UPF2	100	92.767	ENSCCAG00000035991	UPF2	100	92.767	Cebus_capucinus
ENSOGAG00000005796	UPF2	100	98.585	ENSCATG00000032679	UPF2	100	98.585	Cercocebus_atys
ENSOGAG00000005796	UPF2	100	97.089	ENSCLAG00000011434	UPF2	100	97.089	Chinchilla_lanigera
ENSOGAG00000005796	UPF2	100	98.585	ENSCSAG00000013372	UPF2	100	98.585	Chlorocebus_sabaeus
ENSOGAG00000005796	UPF2	87	99.777	ENSCHOG00000000422	UPF2	89	99.777	Choloepus_hoffmanni
ENSOGAG00000005796	UPF2	99	92.750	ENSCPBG00000027823	UPF2	100	92.593	Chrysemys_picta_bellii
ENSOGAG00000005796	UPF2	79	48.865	ENSCSAVG00000007772	-	79	50.448	Ciona_savignyi
ENSOGAG00000005796	UPF2	99	92.188	ENSCANG00000040396	UPF2	100	92.840	Colobus_angolensis_palliatus
ENSOGAG00000005796	UPF2	100	97.954	ENSCGRG00001019347	Upf2	100	97.954	Cricetulus_griseus_chok1gshd
ENSOGAG00000005796	UPF2	100	97.954	ENSCGRG00000017993	Upf2	100	97.954	Cricetulus_griseus_crigri
ENSOGAG00000005796	UPF2	91	80.776	ENSCSEG00000003520	UPF2	99	78.031	Cynoglossus_semilaevis
ENSOGAG00000005796	UPF2	99	82.325	ENSCVAG00000006167	UPF2	100	82.482	Cyprinodon_variegatus
ENSOGAG00000005796	UPF2	100	97.640	ENSDNOG00000018160	UPF2	100	97.640	Dasypus_novemcinctus
ENSOGAG00000005796	UPF2	100	97.325	ENSDORG00000002478	Upf2	100	97.325	Dipodomys_ordii
ENSOGAG00000005796	UPF2	72	100.000	ENSETEG00000011583	-	67	100.000	Echinops_telfairi
ENSOGAG00000005796	UPF2	69	68.209	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSOGAG00000005796	UPF2	100	97.797	ENSEASG00005019274	UPF2	100	98.457	Equus_asinus_asinus
ENSOGAG00000005796	UPF2	100	97.876	ENSECAG00000017022	UPF2	100	97.876	Equus_caballus
ENSOGAG00000005796	UPF2	82	94.249	ENSEEUG00000007819	UPF2	82	94.249	Erinaceus_europaeus
ENSOGAG00000005796	UPF2	99	81.626	ENSELUG00000012014	UPF2	100	82.115	Esox_lucius
ENSOGAG00000005796	UPF2	100	98.343	ENSFCAG00000005785	UPF2	100	97.482	Felis_catus
ENSOGAG00000005796	UPF2	100	93.234	ENSFALG00000001889	UPF2	98	93.234	Ficedula_albicollis
ENSOGAG00000005796	UPF2	100	97.010	ENSFDAG00000014348	UPF2	100	97.010	Fukomys_damarensis
ENSOGAG00000005796	UPF2	99	82.482	ENSFHEG00000009826	UPF2	100	82.769	Fundulus_heteroclitus
ENSOGAG00000005796	UPF2	91	83.851	ENSGMOG00000005557	UPF2	100	80.703	Gadus_morhua
ENSOGAG00000005796	UPF2	100	93.868	ENSGALG00000033772	UPF2	100	93.868	Gallus_gallus
ENSOGAG00000005796	UPF2	100	79.563	ENSGAFG00000020867	UPF2	100	81.825	Gambusia_affinis
ENSOGAG00000005796	UPF2	90	84.211	ENSGACG00000001080	UPF2	100	82.109	Gasterosteus_aculeatus
ENSOGAG00000005796	UPF2	100	93.076	ENSGAGG00000002700	UPF2	100	93.076	Gopherus_agassizii
ENSOGAG00000005796	UPF2	100	98.349	ENSGGOG00000001479	UPF2	100	98.349	Gorilla_gorilla
ENSOGAG00000005796	UPF2	100	80.811	ENSHBUG00000004249	UPF2	100	83.203	Haplochromis_burtoni
ENSOGAG00000005796	UPF2	99	85.591	ENSHGLG00000003822	-	99	84.961	Heterocephalus_glaber_female
ENSOGAG00000005796	UPF2	100	97.089	ENSHGLG00000015176	-	100	97.089	Heterocephalus_glaber_female
ENSOGAG00000005796	UPF2	99	92.829	ENSHGLG00100010036	UPF2	100	90.443	Heterocephalus_glaber_male
ENSOGAG00000005796	UPF2	100	80.653	ENSHCOG00000004025	UPF2	99	80.808	Hippocampus_comes
ENSOGAG00000005796	UPF2	100	81.357	ENSIPUG00000015524	UPF2	100	81.967	Ictalurus_punctatus
ENSOGAG00000005796	UPF2	100	97.482	ENSSTOG00000013075	UPF2	100	97.482	Ictidomys_tridecemlineatus
ENSOGAG00000005796	UPF2	100	96.617	ENSJJAG00000004913	Upf2	100	96.617	Jaculus_jaculus
ENSOGAG00000005796	UPF2	99	81.832	ENSKMAG00000001071	UPF2	100	82.418	Kryptolebias_marmoratus
ENSOGAG00000005796	UPF2	100	82.751	ENSLBEG00000016394	-	99	83.268	Labrus_bergylta
ENSOGAG00000005796	UPF2	80	82.024	ENSLBEG00000000728	-	93	82.417	Labrus_bergylta
ENSOGAG00000005796	UPF2	99	79.467	ENSLACG00000015945	UPF2	100	79.467	Latimeria_chalumnae
ENSOGAG00000005796	UPF2	99	86.288	ENSLOCG00000015698	UPF2	100	86.210	Lepisosteus_oculatus
ENSOGAG00000005796	UPF2	100	98.506	ENSMFAG00000043865	UPF2	100	98.506	Macaca_fascicularis
ENSOGAG00000005796	UPF2	100	98.506	ENSMMUG00000008241	UPF2	100	98.506	Macaca_mulatta
ENSOGAG00000005796	UPF2	81	98.146	ENSMNEG00000008062	UPF2	100	98.146	Macaca_nemestrina
ENSOGAG00000005796	UPF2	99	95.543	ENSMLEG00000036120	UPF2	100	99.275	Mandrillus_leucophaeus
ENSOGAG00000005796	UPF2	100	82.115	ENSMAMG00000018276	UPF2	100	82.866	Mastacembelus_armatus
ENSOGAG00000005796	UPF2	100	80.967	ENSMZEG00005021595	UPF2	100	83.229	Maylandia_zebra
ENSOGAG00000005796	UPF2	99	93.234	ENSMGAG00000004573	UPF2	99	93.234	Meleagris_gallopavo
ENSOGAG00000005796	UPF2	100	95.594	ENSMAUG00000016512	Upf2	100	95.594	Mesocricetus_auratus
ENSOGAG00000005796	UPF2	99	94.405	ENSMICG00000001716	UPF2	100	94.405	Microcebus_murinus
ENSOGAG00000005796	UPF2	100	97.246	ENSMOCG00000008263	Upf2	100	97.246	Microtus_ochrogaster
ENSOGAG00000005796	UPF2	99	80.234	ENSMMOG00000006528	UPF2	100	80.501	Mola_mola
ENSOGAG00000005796	UPF2	100	95.673	ENSMODG00000016794	UPF2	100	95.673	Monodelphis_domestica
ENSOGAG00000005796	UPF2	99	82.330	ENSMALG00000002663	UPF2	100	82.459	Monopterus_albus
ENSOGAG00000005796	UPF2	100	97.718	MGP_CAROLIEiJ_G0023157	Upf2	100	98.341	Mus_caroli
ENSOGAG00000005796	UPF2	100	97.718	ENSMUSG00000043241	Upf2	100	97.718	Mus_musculus
ENSOGAG00000005796	UPF2	100	97.325	MGP_PahariEiJ_G0019217	Upf2	100	97.333	Mus_pahari
ENSOGAG00000005796	UPF2	100	97.954	MGP_SPRETEiJ_G0024075	Upf2	100	97.954	Mus_spretus
ENSOGAG00000005796	UPF2	100	97.640	ENSMPUG00000001064	UPF2	100	97.640	Mustela_putorius_furo
ENSOGAG00000005796	UPF2	99	97.093	ENSMLUG00000000228	UPF2	100	97.093	Myotis_lucifugus
ENSOGAG00000005796	UPF2	100	80.967	ENSNBRG00000013629	UPF2	100	83.229	Neolamprologus_brichardi
ENSOGAG00000005796	UPF2	100	98.428	ENSNLEG00000012058	UPF2	100	98.428	Nomascus_leucogenys
ENSOGAG00000005796	UPF2	57	97.927	ENSMEUG00000002180	-	60	97.927	Notamacropus_eugenii
ENSOGAG00000005796	UPF2	76	100.000	ENSOPRG00000006801	-	77	100.000	Ochotona_princeps
ENSOGAG00000005796	UPF2	100	96.853	ENSODEG00000001290	UPF2	100	96.853	Octodon_degus
ENSOGAG00000005796	UPF2	100	81.045	ENSONIG00000017991	UPF2	100	83.307	Oreochromis_niloticus
ENSOGAG00000005796	UPF2	99	97.022	ENSOCUG00000006230	UPF2	100	97.022	Oryctolagus_cuniculus
ENSOGAG00000005796	UPF2	100	81.401	ENSORLG00000017189	UPF2	100	82.293	Oryzias_latipes
ENSOGAG00000005796	UPF2	100	81.401	ENSORLG00020005969	UPF2	100	82.293	Oryzias_latipes_hni
ENSOGAG00000005796	UPF2	100	81.401	ENSORLG00015005713	UPF2	100	82.293	Oryzias_latipes_hsok
ENSOGAG00000005796	UPF2	99	78.315	ENSOMEG00000023420	UPF2	98	79.515	Oryzias_melastigma
ENSOGAG00000005796	UPF2	100	97.643	ENSOARG00000014587	UPF2	100	97.643	Ovis_aries
ENSOGAG00000005796	UPF2	99	94.292	ENSPPAG00000037953	UPF2	100	95.039	Pan_paniscus
ENSOGAG00000005796	UPF2	100	97.482	ENSPPRG00000000690	UPF2	100	97.482	Panthera_pardus
ENSOGAG00000005796	UPF2	100	97.482	ENSPTIG00000008867	UPF2	100	97.482	Panthera_tigris_altaica
ENSOGAG00000005796	UPF2	100	98.349	ENSPTRG00000002291	UPF2	100	98.349	Pan_troglodytes
ENSOGAG00000005796	UPF2	100	98.506	ENSPANG00000023399	UPF2	100	98.506	Papio_anubis
ENSOGAG00000005796	UPF2	100	80.031	ENSPKIG00000025502	UPF2	100	81.981	Paramormyrops_kingsleyae
ENSOGAG00000005796	UPF2	59	91.501	ENSPSIG00000015158	UPF2	95	91.501	Pelodiscus_sinensis
ENSOGAG00000005796	UPF2	99	79.654	ENSPMGG00000005259	UPF2	100	80.754	Periophthalmus_magnuspinnatus
ENSOGAG00000005796	UPF2	93	95.627	ENSPEMG00000015731	Upf2	99	95.627	Peromyscus_maniculatus_bairdii
ENSOGAG00000005796	UPF2	100	95.358	ENSPCIG00000006656	UPF2	100	95.358	Phascolarctos_cinereus
ENSOGAG00000005796	UPF2	100	79.641	ENSPFOG00000017118	UPF2	100	82.059	Poecilia_formosa
ENSOGAG00000005796	UPF2	100	79.641	ENSPLAG00000005094	UPF2	100	82.059	Poecilia_latipinna
ENSOGAG00000005796	UPF2	100	79.641	ENSPMEG00000017009	UPF2	100	82.059	Poecilia_mexicana
ENSOGAG00000005796	UPF2	99	79.405	ENSPREG00000021880	UPF2	100	82.017	Poecilia_reticulata
ENSOGAG00000005796	UPF2	66	99.163	ENSPPYG00000002089	-	100	99.163	Pongo_abelii
ENSOGAG00000005796	UPF2	100	83.478	ENSPCAG00000000684	UPF2	100	83.478	Procavia_capensis
ENSOGAG00000005796	UPF2	99	95.981	ENSPCOG00000021656	UPF2	100	96.060	Propithecus_coquereli
ENSOGAG00000005796	UPF2	100	89.937	ENSPVAG00000017286	UPF2	100	89.937	Pteropus_vampyrus
ENSOGAG00000005796	UPF2	99	78.516	ENSPNYG00000017096	UPF2	100	80.781	Pundamilia_nyererei
ENSOGAG00000005796	UPF2	100	82.917	ENSPNAG00000009357	UPF2	100	83.463	Pygocentrus_nattereri
ENSOGAG00000005796	UPF2	99	91.287	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSOGAG00000005796	UPF2	99	97.557	ENSRBIG00000037780	UPF2	100	97.557	Rhinopithecus_bieti
ENSOGAG00000005796	UPF2	100	98.428	ENSRROG00000043547	UPF2	100	98.428	Rhinopithecus_roxellana
ENSOGAG00000005796	UPF2	100	98.192	ENSSBOG00000020012	UPF2	100	98.192	Saimiri_boliviensis_boliviensis
ENSOGAG00000005796	UPF2	100	81.372	ENSSFOG00015023788	upf2	100	82.463	Scleropages_formosus
ENSOGAG00000005796	UPF2	90	83.088	ENSSMAG00000007637	UPF2	100	80.543	Scophthalmus_maximus
ENSOGAG00000005796	UPF2	100	82.683	ENSSDUG00000017244	UPF2	99	83.229	Seriola_dumerili
ENSOGAG00000005796	UPF2	99	81.049	ENSSLDG00000016866	UPF2	100	81.363	Seriola_lalandi_dorsalis
ENSOGAG00000005796	UPF2	100	95.515	ENSSARG00000008615	UPF2	100	95.515	Sorex_araneus
ENSOGAG00000005796	UPF2	99	90.079	ENSSPUG00000014544	UPF2	99	90.079	Sphenodon_punctatus
ENSOGAG00000005796	UPF2	68	98.734	ENSSSCG00000011117	-	100	98.734	Sus_scrofa
ENSOGAG00000005796	UPF2	99	93.218	ENSTGUG00000002163	-	100	93.218	Taeniopygia_guttata
ENSOGAG00000005796	UPF2	100	81.620	ENSTRUG00000007519	UPF2	99	81.981	Takifugu_rubripes
ENSOGAG00000005796	UPF2	93	90.432	ENSTBEG00000012679	UPF2	93	90.771	Tupaia_belangeri
ENSOGAG00000005796	UPF2	100	97.561	ENSTTRG00000016388	UPF2	100	97.561	Tursiops_truncatus
ENSOGAG00000005796	UPF2	94	99.306	ENSUAMG00000023560	UPF2	99	99.306	Ursus_americanus
ENSOGAG00000005796	UPF2	100	97.876	ENSUMAG00000012953	UPF2	95	97.876	Ursus_maritimus
ENSOGAG00000005796	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSOGAG00000005796	UPF2	100	97.718	ENSVVUG00000006166	UPF2	100	97.718	Vulpes_vulpes
ENSOGAG00000005796	UPF2	100	82.970	ENSXETG00000033103	UPF2	91	88.495	Xenopus_tropicalis
ENSOGAG00000005796	UPF2	92	84.274	ENSXCOG00000011604	UPF2	100	81.719	Xiphophorus_couchianus
ENSOGAG00000005796	UPF2	92	84.471	ENSXMAG00000017209	UPF2	100	81.747	Xiphophorus_maculatus