EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000006666 (Gene tree)
Gene ID: 100944960
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 83706 bases
Position: chrGL873615.1:2743696-2827401
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000005968	Ago_hook	PF10427.9	1.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000006674	TNRC6A-201	5811	-	ENSOGAP00000005968	1936 (aa)	-	H0WUN8

Gene Model

Click here to download ENSOGAG00000006666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000006666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000006666	TNRC6A	85	42.390	ENSOGAG00000007197	TNRC6C	99	42.928
ENSOGAG00000006666	TNRC6A	98	36.419	ENSOGAG00000011096	TNRC6B	99	36.708

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000006666	TNRC6A	100	97.072	ENSG00000090905	TNRC6A	99	97.072	Homo_sapiens
ENSOGAG00000006666	TNRC6A	98	96.501	ENSAMEG00000009333	TNRC6A	100	96.501	Ailuropoda_melanoleuca
ENSOGAG00000006666	TNRC6A	98	82.584	ENSAPLG00000009978	TNRC6A	100	82.584	Anas_platyrhynchos
ENSOGAG00000006666	TNRC6A	100	54.425	ENSACAG00000011857	TNRC6A	99	56.114	Anolis_carolinensis
ENSOGAG00000006666	TNRC6A	100	97.219	ENSANAG00000025252	TNRC6A	99	97.219	Aotus_nancymaae
ENSOGAG00000006666	TNRC6A	92	56.927	ENSAMXG00000019919	tnrc6a	99	56.557	Astyanax_mexicanus
ENSOGAG00000006666	TNRC6A	98	95.581	ENSBTAG00000017999	TNRC6A	99	95.318	Bos_taurus
ENSOGAG00000006666	TNRC6A	100	96.569	ENSCJAG00000020677	TNRC6A	99	96.569	Callithrix_jacchus
ENSOGAG00000006666	TNRC6A	100	96.708	ENSCAFG00000017531	TNRC6A	99	96.708	Canis_familiaris
ENSOGAG00000006666	TNRC6A	99	94.693	ENSCAFG00020021160	TNRC6A	99	95.233	Canis_lupus_dingo
ENSOGAG00000006666	TNRC6A	100	92.828	ENSCHIG00000019448	TNRC6A	99	92.621	Capra_hircus
ENSOGAG00000006666	TNRC6A	100	97.015	ENSTSYG00000012711	TNRC6A	99	97.015	Carlito_syrichta
ENSOGAG00000006666	TNRC6A	100	93.960	ENSCPOG00000036684	TNRC6A	99	93.960	Cavia_porcellus
ENSOGAG00000006666	TNRC6A	100	97.068	ENSCCAG00000033664	TNRC6A	99	97.068	Cebus_capucinus
ENSOGAG00000006666	TNRC6A	100	94.012	ENSCATG00000019284	TNRC6A	99	94.115	Cercocebus_atys
ENSOGAG00000006666	TNRC6A	100	89.089	ENSCLAG00000010217	TNRC6A	99	89.295	Chinchilla_lanigera
ENSOGAG00000006666	TNRC6A	100	97.172	ENSCSAG00000006561	TNRC6A	99	97.172	Chlorocebus_sabaeus
ENSOGAG00000006666	TNRC6A	93	91.988	ENSCHOG00000009374	TNRC6A	92	91.842	Choloepus_hoffmanni
ENSOGAG00000006666	TNRC6A	92	80.034	ENSCPBG00000001881	TNRC6A	99	80.090	Chrysemys_picta_bellii
ENSOGAG00000006666	TNRC6A	100	97.324	ENSCANG00000041549	TNRC6A	99	97.324	Colobus_angolensis_palliatus
ENSOGAG00000006666	TNRC6A	98	94.657	ENSCGRG00001015021	Tnrc6a	99	94.759	Cricetulus_griseus_chok1gshd
ENSOGAG00000006666	TNRC6A	100	91.190	ENSCGRG00000013351	Tnrc6a	99	91.293	Cricetulus_griseus_crigri
ENSOGAG00000006666	TNRC6A	92	56.576	ENSDARG00000079688	tnrc6a	99	56.389	Danio_rerio
ENSOGAG00000006666	TNRC6A	99	94.358	ENSDNOG00000013989	TNRC6A	100	94.358	Dasypus_novemcinctus
ENSOGAG00000006666	TNRC6A	98	86.149	ENSETEG00000014658	TNRC6A	99	86.149	Echinops_telfairi
ENSOGAG00000006666	TNRC6A	100	97.062	ENSEASG00005017693	TNRC6A	99	97.062	Equus_asinus_asinus
ENSOGAG00000006666	TNRC6A	100	97.062	ENSECAG00000025056	TNRC6A	100	97.047	Equus_caballus
ENSOGAG00000006666	TNRC6A	98	89.254	ENSEEUG00000004530	TNRC6A	99	89.254	Erinaceus_europaeus
ENSOGAG00000006666	TNRC6A	100	95.464	ENSFCAG00000025236	TNRC6A	99	95.464	Felis_catus
ENSOGAG00000006666	TNRC6A	98	79.658	ENSFALG00000003757	TNRC6A	99	80.193	Ficedula_albicollis
ENSOGAG00000006666	TNRC6A	92	80.795	ENSGALG00000006068	TNRC6A	99	80.907	Gallus_gallus
ENSOGAG00000006666	TNRC6A	92	79.665	ENSGAGG00000023209	TNRC6A	99	79.721	Gopherus_agassizii
ENSOGAG00000006666	TNRC6A	100	96.918	ENSGGOG00000005137	TNRC6A	99	96.918	Gorilla_gorilla
ENSOGAG00000006666	TNRC6A	100	91.594	ENSHGLG00000012474	-	99	91.542	Heterocephalus_glaber_female
ENSOGAG00000006666	TNRC6A	95	72.945	ENSHGLG00000007368	-	93	72.727	Heterocephalus_glaber_female
ENSOGAG00000006666	TNRC6A	99	91.309	ENSHGLG00100012496	-	99	91.257	Heterocephalus_glaber_male
ENSOGAG00000006666	TNRC6A	100	95.795	ENSSTOG00000023394	TNRC6A	98	95.795	Ictidomys_tridecemlineatus
ENSOGAG00000006666	TNRC6A	98	69.876	ENSLACG00000006277	TNRC6A	100	70.600	Latimeria_chalumnae
ENSOGAG00000006666	TNRC6A	100	83.002	ENSLOCG00000005517	tnrc6a	92	83.002	Lepisosteus_oculatus
ENSOGAG00000006666	TNRC6A	98	92.505	ENSLAFG00000004209	TNRC6A	99	92.606	Loxodonta_africana
ENSOGAG00000006666	TNRC6A	98	95.582	ENSMFAG00000003824	TNRC6A	99	95.582	Macaca_fascicularis
ENSOGAG00000006666	TNRC6A	100	97.066	ENSMMUG00000020428	TNRC6A	99	97.066	Macaca_mulatta
ENSOGAG00000006666	TNRC6A	100	96.672	ENSMNEG00000034854	TNRC6A	99	96.672	Macaca_nemestrina
ENSOGAG00000006666	TNRC6A	98	95.179	ENSMLEG00000042737	TNRC6A	97	94.971	Mandrillus_leucophaeus
ENSOGAG00000006666	TNRC6A	98	80.425	ENSMGAG00000006455	TNRC6A	99	80.448	Meleagris_gallopavo
ENSOGAG00000006666	TNRC6A	100	92.260	ENSMAUG00000012750	Tnrc6a	99	92.002	Mesocricetus_auratus
ENSOGAG00000006666	TNRC6A	100	97.843	ENSMICG00000030685	TNRC6A	99	97.843	Microcebus_murinus
ENSOGAG00000006666	TNRC6A	100	92.617	ENSMOCG00000000152	Tnrc6a	99	92.308	Microtus_ochrogaster
ENSOGAG00000006666	TNRC6A	98	82.335	ENSMODG00000016348	TNRC6A	97	82.720	Monodelphis_domestica
ENSOGAG00000006666	TNRC6A	100	91.172	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.433	Mus_caroli
ENSOGAG00000006666	TNRC6A	100	91.740	ENSMUSG00000052707	Tnrc6a	99	94.861	Mus_musculus
ENSOGAG00000006666	TNRC6A	100	92.105	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.289	Mus_pahari
ENSOGAG00000006666	TNRC6A	100	94.166	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.861	Mus_spretus
ENSOGAG00000006666	TNRC6A	98	82.205	ENSMPUG00000012324	TNRC6A	100	82.100	Mustela_putorius_furo
ENSOGAG00000006666	TNRC6A	98	93.421	ENSMLUG00000002701	TNRC6A	100	93.421	Myotis_lucifugus
ENSOGAG00000006666	TNRC6A	100	93.550	ENSNGAG00000020702	Tnrc6a	99	93.550	Nannospalax_galili
ENSOGAG00000006666	TNRC6A	98	94.090	ENSNLEG00000011851	TNRC6A	98	94.139	Nomascus_leucogenys
ENSOGAG00000006666	TNRC6A	75	89.147	ENSMEUG00000015959	-	74	89.147	Notamacropus_eugenii
ENSOGAG00000006666	TNRC6A	96	99.627	ENSOPRG00000005819	TNRC6A	95	99.627	Ochotona_princeps
ENSOGAG00000006666	TNRC6A	99	87.661	ENSODEG00000012802	TNRC6A	99	87.868	Octodon_degus
ENSOGAG00000006666	TNRC6A	88	83.044	ENSOANG00000007672	TNRC6A	99	83.042	Ornithorhynchus_anatinus
ENSOGAG00000006666	TNRC6A	98	93.740	ENSOCUG00000004325	TNRC6A	100	93.740	Oryctolagus_cuniculus
ENSOGAG00000006666	TNRC6A	99	94.499	ENSOARG00000017950	TNRC6A	100	94.242	Ovis_aries
ENSOGAG00000006666	TNRC6A	100	96.670	ENSPPAG00000028379	TNRC6A	99	96.670	Pan_paniscus
ENSOGAG00000006666	TNRC6A	100	95.464	ENSPPRG00000005861	TNRC6A	99	95.464	Panthera_pardus
ENSOGAG00000006666	TNRC6A	100	93.943	ENSPTIG00000006346	TNRC6A	99	93.994	Panthera_tigris_altaica
ENSOGAG00000006666	TNRC6A	98	96.514	ENSPTRG00000007898	TNRC6A	99	96.514	Pan_troglodytes
ENSOGAG00000006666	TNRC6A	100	94.615	ENSPANG00000018523	TNRC6A	99	94.615	Papio_anubis
ENSOGAG00000006666	TNRC6A	88	75.862	ENSPKIG00000012859	tnrc6a	96	77.925	Paramormyrops_kingsleyae
ENSOGAG00000006666	TNRC6A	78	75.376	ENSPSIG00000003965	TNRC6A	100	75.441	Pelodiscus_sinensis
ENSOGAG00000006666	TNRC6A	100	92.308	ENSPEMG00000016318	Tnrc6a	99	92.153	Peromyscus_maniculatus_bairdii
ENSOGAG00000006666	TNRC6A	98	84.006	ENSPCIG00000012106	TNRC6A	100	84.216	Phascolarctos_cinereus
ENSOGAG00000006666	TNRC6A	100	96.308	ENSPPYG00000007202	TNRC6A	99	96.308	Pongo_abelii
ENSOGAG00000006666	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	93	100.000	Procavia_capensis
ENSOGAG00000006666	TNRC6A	100	95.581	ENSPCOG00000010134	TNRC6A	99	95.581	Propithecus_coquereli
ENSOGAG00000006666	TNRC6A	89	71.114	ENSPVAG00000012066	TNRC6A	99	70.940	Pteropus_vampyrus
ENSOGAG00000006666	TNRC6A	98	93.466	ENSRNOG00000024737	Tnrc6a	98	93.521	Rattus_norvegicus
ENSOGAG00000006666	TNRC6A	99	97.206	ENSRBIG00000014222	TNRC6A	100	97.206	Rhinopithecus_bieti
ENSOGAG00000006666	TNRC6A	100	97.421	ENSRROG00000032360	TNRC6A	99	97.421	Rhinopithecus_roxellana
ENSOGAG00000006666	TNRC6A	98	96.539	ENSSBOG00000036197	TNRC6A	100	97.721	Saimiri_boliviensis_boliviensis
ENSOGAG00000006666	TNRC6A	92	81.672	ENSSHAG00000008811	TNRC6A	99	82.379	Sarcophilus_harrisii
ENSOGAG00000006666	TNRC6A	88	67.216	ENSSFOG00015008920	tnrc6a	99	64.662	Scleropages_formosus
ENSOGAG00000006666	TNRC6A	72	83.514	ENSSARG00000002479	TNRC6A	89	83.877	Sorex_araneus
ENSOGAG00000006666	TNRC6A	91	79.027	ENSSPUG00000010525	TNRC6A	100	79.027	Sphenodon_punctatus
ENSOGAG00000006666	TNRC6A	100	93.231	ENSSSCG00000038870	TNRC6A	100	97.545	Sus_scrofa
ENSOGAG00000006666	TNRC6A	98	78.527	ENSTGUG00000006142	TNRC6A	99	78.645	Taeniopygia_guttata
ENSOGAG00000006666	TNRC6A	98	94.676	ENSTBEG00000014965	TNRC6A	100	94.676	Tupaia_belangeri
ENSOGAG00000006666	TNRC6A	92	98.058	ENSTTRG00000002008	TNRC6A	90	98.058	Tursiops_truncatus
ENSOGAG00000006666	TNRC6A	80	93.088	ENSUAMG00000006656	-	93	93.088	Ursus_americanus
ENSOGAG00000006666	TNRC6A	98	96.476	ENSUMAG00000008274	TNRC6A	99	96.476	Ursus_maritimus
ENSOGAG00000006666	TNRC6A	57	85.604	ENSVPAG00000010764	-	57	85.604	Vicugna_pacos
ENSOGAG00000006666	TNRC6A	100	96.605	ENSVVUG00000005380	TNRC6A	100	96.587	Vulpes_vulpes
ENSOGAG00000006666	TNRC6A	95	65.933	ENSXETG00000030437	TNRC6A	99	66.182	Xenopus_tropicalis